MGE detailed information
MGE type: Genomic_island MGE length: 24980 bp
Accession: NZ_CP082774 Location: 480160..505139 Organism: Escherichia coli O16:H6 strain CU37RT-2 Replicon: chromosome
Accession: NZ_CP082774 Location: 480160..505139 Organism: Escherichia coli O16:H6 strain CU37RT-2 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| K8B88_RS02170 (476566) | 476566..477285 | - | 720 | WP_000611282.1 | two-component system response regulator DcuR | - |
| K8B88_RS02175 (477282) | 477282..478913 | - | 1632 | WP_001216466.1 | sensor histidine kinase | - |
| K8B88_RS02180 (479094) | 479094..479324 | + | 231 | WP_000373291.1 | 4Fe-4S mono-cluster protein YjdI | - |
| K8B88_RS02185 (479336) | 479336..479608 | + | 273 | WP_000405647.1 | GNAT family N-acetyltransferase | - |
| K8B88_RS02190 (479836) | 479836..480132 | + | 297 | WP_001312331.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | - |
| K8B88_RS02195 (480160) | 480160..480333 | + | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | - |
| K8B88_RS02200 (480452) | 480452..481969 | - | 1518 | WP_000003805.1 | lysine--tRNA ligase | - |
| K8B88_RS02205 (482206) | 482206..483663 | - | 1458 | WP_000856826.1 | dipeptide/tripeptide permease DtpC | - |
| K8B88_RS02210 (483722) | 483722..485869 | - | 2148 | WP_001296667.1 | lysine decarboxylase CadA | - |
| K8B88_RS02215 (485949) | 485949..487283 | - | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| K8B88_RS02220 (487649) | 487649..489187 | - | 1539 | WP_001187191.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| K8B88_RS02225 (489924) | 489924..490778 | - | 855 | WP_001588930.1 | DUF4942 domain-containing protein | - |
| K8B88_RS02230 (490863) | 490863..491060 | - | 198 | WP_000839291.1 | DUF957 domain-containing protein | - |
| K8B88_RS02235 (491072) | 491072..491560 | - | 489 | WP_000761667.1 | DUF5983 family protein | - |
| K8B88_RS02240 (491557) | 491557..491934 | - | 378 | WP_000854747.1 | TA system toxin CbtA family protein | Toxin Detail |
| K8B88_RS02245 (492024) | 492024..492392 | - | 369 | WP_021538665.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| K8B88_RS02250 (492467) | 492467..492688 | - | 222 | WP_001825901.1 | DUF987 domain-containing protein | - |
| K8B88_RS02255 (492751) | 492751..493227 | - | 477 | WP_001186747.1 | RadC family protein | - |
| K8B88_RS02260 (493243) | 493243..493728 | - | 486 | WP_021538211.1 | antirestriction protein | - |
| K8B88_RS02265 (493820) | 493820..494638 | - | 819 | WP_001234693.1 | DUF932 domain-containing protein | - |
| K8B88_RS02270 (494739) | 494739..494972 | - | 234 | WP_021538212.1 | DUF905 family protein | - |
| K8B88_RS02275 (494978) | 494978..495655 | - | 678 | WP_001097364.1 | hypothetical protein | - |
| K8B88_RS02280 (495774) | 495774..496658 | - | 885 | WP_000010387.1 | 50S ribosome-binding GTPase | - |
| K8B88_RS02285 (496765) | 496765..497697 | + | 933 | WP_021538213.1 | hypothetical protein | - |
| K8B88_RS02290 (497694) | 497694..498503 | - | 810 | WP_000816117.1 | hypothetical protein | - |
| K8B88_RS24530 (498943) | 498943..499077 | + | 135 | WP_000268384.1 | hypothetical protein | - |
| K8B88_RS02295 (499836) | 499836..500366 | - | 531 | WP_000778605.1 | hypothetical protein | - |
| K8B88_RS02300 (501036) | 501036..501767 | + | 732 | WP_001075495.1 | inovirus Gp2 family protein | - |
| K8B88_RS02305 (502288) | 502288..502740 | + | 453 | WP_000558152.1 | acyltransferase | - |
| K8B88_RS02310 (503276) | 503276..504211 | + | 936 | WP_000332862.1 | pseudouridine kinase | - |
| K8B88_RS02315 (504204) | 504204..505139 | + | 936 | WP_001290195.1 | pseudouridine-5'-phosphate glycosidase | - |
| K8B88_RS02320 (505223) | 505223..506473 | + | 1251 | WP_001328687.1 | NupC/NupG family nucleoside CNT transporter | - |
| K8B88_RS02325 (506492) | 506492..507586 | - | 1095 | WP_000370278.1 | sugar kinase | - |
| K8B88_RS02330 (508896) | 508896..509462 | + | 567 | WP_001126810.1 | inovirus-type Gp2 protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|