MGE detailed information
MGE type: Prophage MGE length: 44256 bp
Accession: NZ_CP081762 Location: 3892118..3936373 Organism: Escherichia coli strain CX21 Replicon: chromosome
Accession: NZ_CP081762 Location: 3892118..3936373 Organism: Escherichia coli strain CX21 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| J6O46_RS19055 (3888096) | 3888096..3889247 | + | 1152 | WP_000323729.1 | trypsin-like peptidase domain-containing protein | - |
| J6O46_RS19060 (3889472) | 3889472..3890041 | - | 570 | Protein_3743 | IS5 family transposase | - |
| J6O46_RS19065 (3891163) | 3891163..3892026 | + | 864 | WP_001065555.1 | GTPase family protein | - |
| J6O46_RS19070 (3892118) | 3892118..3892939 | + | 822 | WP_000197388.1 | DUF932 domain-containing protein | - |
| J6O46_RS19075 (3893156) | 3893156..3893857 | + | 702 | WP_060616110.1 | WYL domain-containing protein | - |
| J6O46_RS19080 (3893898) | 3893898..3894134 | + | 237 | WP_001144031.1 | protein YpjK | - |
| J6O46_RS19085 (3894134) | 3894134..3894577 | + | 444 | WP_000649865.1 | hypothetical protein | - |
| J6O46_RS19090 (3894600) | 3894600..3895067 | + | 468 | WP_001385283.1 | protein YkfB | - |
| J6O46_RS19095 (3895144) | 3895144..3895383 | + | 240 | WP_000194654.1 | DUF905 family protein | - |
| J6O46_RS19100 (3895481) | 3895481..3895939 | + | 459 | WP_000211838.1 | antirestriction protein | - |
| J6O46_RS19105 (3895955) | 3895955..3896431 | + | 477 | WP_001549015.1 | RadC family protein | - |
| J6O46_RS19110 (3896440) | 3896440..3896661 | + | 222 | WP_000691994.1 | DUF987 domain-containing protein | - |
| J6O46_RS19115 (3896680) | 3896680..3896997 | + | 318 | WP_000070396.1 | type IV toxin-antitoxin system antitoxin YafW | Antitoxin Detail |
| J6O46_RS19120 (3897018) | 3897018..3897359 | + | 342 | WP_000854680.1 | type IV toxin-antitoxin system toxin YkfI | Toxin Detail |
| J6O46_RS19125 (3898180) | 3898180..3899646 | - | 1467 | WP_000723924.1 | hypothetical protein | - |
| J6O46_RS19130 (3899962) | 3899962..3900351 | - | 390 | WP_223596848.1 | hypothetical protein | - |
| J6O46_RS19135 (3900595) | 3900595..3900681 | - | 87 | Protein_3758 | capsid protein | - |
| J6O46_RS19140 (3900886) | 3900886..3901659 | + | 774 | WP_000355484.1 | hypothetical protein | - |
| J6O46_RS19145 (3901720) | 3901720..3902274 | - | 555 | WP_000905043.1 | Tn3 family transposase TnpR_ISPa38 | Transposase |
| J6O46_RS19150 (3902304) | 3902304..3902873 | + | 570 | WP_002431159.1 | hypothetical protein | - |
| J6O46_RS19155 (3902873) | 3902873..3903466 | + | 594 | WP_000613358.1 | tail fiber assembly protein | - |
| J6O46_RS19160 (3903438) | 3903438..3903881 | - | 444 | WP_000978831.1 | tail fiber assembly protein | - |
| J6O46_RS19165 (3903881) | 3903881..3904504 | - | 624 | WP_000554682.1 | hypothetical protein | - |
| J6O46_RS19170 (3904508) | 3904508..3905092 | - | 585 | WP_016243480.1 | YmfQ family protein | - |
| J6O46_RS19175 (3905083) | 3905083..3906141 | - | 1059 | WP_016243479.1 | baseplate J/gp47 family protein | - |
| J6O46_RS19180 (3906128) | 3906128..3906553 | - | 426 | WP_042027905.1 | phage GP46 family protein | - |
| J6O46_RS19185 (3906553) | 3906553..3907101 | - | 549 | WP_001542670.1 | phage baseplate assembly protein V | - |
| J6O46_RS19190 (3907101) | 3907101..3908180 | - | 1080 | WP_016243477.1 | phage tail protein | - |
| J6O46_RS19195 (3908177) | 3908177..3909505 | - | 1329 | WP_016243476.1 | DNA circularization N-terminal domain-containing protein | - |
| J6O46_RS19200 (3909567) | 3909567..3910097 | - | 531 | WP_000679479.1 | hypothetical protein | - |
| J6O46_RS19205 (3910189) | 3910189..3912021 | - | 1833 | WP_016243475.1 | phage tail tape measure protein | - |
| J6O46_RS19210 (3912163) | 3912163..3912432 | - | 270 | WP_000661051.1 | phage tail assembly protein | - |
| J6O46_RS19215 (3912432) | 3912432..3912788 | - | 357 | WP_000090998.1 | phage tail tube protein | - |
| J6O46_RS19220 (3912788) | 3912788..3914284 | - | 1497 | WP_001759749.1 | phage tail sheath subtilisin-like domain-containing protein | - |
| J6O46_RS19225 (3914268) | 3914268..3914438 | - | 171 | WP_016243474.1 | DUF2635 domain-containing protein | - |
| J6O46_RS19230 (3914447) | 3914447..3915007 | - | 561 | WP_016243473.1 | hypothetical protein | - |
| J6O46_RS19235 (3915004) | 3915004..3915510 | - | 507 | WP_016243472.1 | hypothetical protein | - |
| J6O46_RS19240 (3915485) | 3915485..3915895 | - | 411 | WP_016243471.1 | phage head closure protein | - |
| J6O46_RS19245 (3915892) | 3915892..3916215 | - | 324 | WP_016243470.1 | head-tail connector protein | - |
| J6O46_RS19250 (3916190) | 3916190..3916417 | - | 228 | WP_016243469.1 | hypothetical protein | - |
| J6O46_RS19255 (3916467) | 3916467..3917672 | - | 1206 | WP_016243468.1 | phage major capsid protein | - |
| J6O46_RS19260 (3917687) | 3917687..3918337 | - | 651 | WP_001193631.1 | HK97 family phage prohead protease | - |
| J6O46_RS19265 (3918315) | 3918315..3919556 | - | 1242 | WP_016243466.1 | phage portal protein | - |
| J6O46_RS19270 (3919556) | 3919556..3919738 | - | 183 | WP_000605606.1 | protein YmfR | - |
| J6O46_RS19275 (3919750) | 3919750..3921483 | - | 1734 | WP_016243465.1 | terminase large subunit | - |
| J6O46_RS19280 (3921480) | 3921480..3921974 | - | 495 | WP_000929173.1 | phage terminase small subunit P27 family | - |
| J6O46_RS19285 (3922100) | 3922100..3922450 | - | 351 | WP_001764251.1 | HNH endonuclease | - |
| J6O46_RS19290 (3922617) | 3922617..3922841 | - | 225 | WP_000892817.1 | hypothetical protein | - |
| J6O46_RS19295 (3922969) | 3922969..3923121 | - | 153 | WP_032146275.1 | hypothetical protein | - |
| J6O46_RS19300 (3923109) | 3923109..3923570 | - | 462 | WP_001701537.1 | lysis protein | - |
| J6O46_RS19305 (3923554) | 3923554..3924030 | - | 477 | WP_001764250.1 | glycoside hydrolase family protein | - |
| J6O46_RS19310 (3924017) | 3924017..3924322 | - | 306 | WP_000544527.1 | phage holin family protein | - |
| J6O46_RS19315 (3924474) | 3924474..3924809 | - | 336 | WP_000606308.1 | hypothetical protein | - |
| J6O46_RS19320 (3924995) | 3924995..3925747 | - | 753 | WP_001047109.1 | antitermination protein | - |
| J6O46_RS19325 (3925761) | 3925761..3926750 | - | 990 | WP_001764249.1 | DUF968 domain-containing protein | - |
| J6O46_RS19330 (3926758) | 3926758..3927555 | - | 798 | WP_223610814.1 | KilA-N domain-containing protein | - |
| J6O46_RS19335 (3927575) | 3927575..3927964 | - | 390 | WP_000767113.1 | RusA family crossover junction endodeoxyribonuclease | - |
| J6O46_RS19340 (3927961) | 3927961..3928287 | - | 327 | WP_000210164.1 | LexA family transcriptional regulator | - |
| J6O46_RS19345 (3928284) | 3928284..3928937 | - | 654 | WP_001764248.1 | phage N-6-adenine-methyltransferase | - |
| J6O46_RS19350 (3928937) | 3928937..3929431 | - | 495 | WP_072278691.1 | PerC family transcriptional regulator | - |
| J6O46_RS19355 (3929428) | 3929428..3930369 | - | 942 | WP_000104967.1 | helix-turn-helix domain-containing protein | - |
| J6O46_RS19360 (3930359) | 3930359..3930538 | - | 180 | WP_071595713.1 | DUF4222 domain-containing protein | - |
| J6O46_RS19365 (3930714) | 3930714..3931271 | - | 558 | WP_000515829.1 | protein YmfL | - |
| J6O46_RS19370 (3931315) | 3931315..3931515 | - | 201 | WP_000649477.1 | YdaS family helix-turn-helix protein | - |
| J6O46_RS19375 (3931606) | 3931606..3932280 | + | 675 | WP_000848748.1 | LexA family transcriptional repressor | - |
| J6O46_RS19380 (3932770) | 3932770..3933366 | + | 597 | WP_001764244.1 | hypothetical protein | - |
| J6O46_RS19385 (3933789) | 3933789..3934325 | + | 537 | WP_000008356.1 | HD family hydrolase | - |
| J6O46_RS19390 (3934316) | 3934316..3934678 | + | 363 | WP_001242705.1 | phage protein | - |
| J6O46_RS19395 (3934678) | 3934678..3934983 | + | 306 | WP_000206736.1 | hypothetical protein | - |
| J6O46_RS19400 (3934983) | 3934983..3935333 | + | 351 | WP_000433939.1 | helix-turn-helix domain-containing protein | - |
| J6O46_RS19405 (3935255) | 3935255..3936373 | + | 1119 | WP_223584494.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| J6O46_RS19415 (3936578) | 3936578..3937831 | - | 1254 | WP_000893260.1 | glutamate-5-semialdehyde dehydrogenase | - |
| J6O46_RS19420 (3937843) | 3937843..3938946 | - | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| J6O46_RS19425 (3939234) | 3939234..3940289 | + | 1056 | WP_000749881.1 | phosphoporin PhoE | - |
| J6O46_RS19430 (3940328) | 3940328..3940729 | - | 402 | WP_000174677.1 | sigma factor-binding protein Crl | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|