MGE detailed information
MGE type: Mobilizable plasmid MGE length: 94674 bp
Accession: NZ_CP081715 Location: 1..94674 Organism: Escherichia coli strain CX04 Replicon: plasmid unnamed2
Accession: NZ_CP081715 Location: 1..94674 Organism: Escherichia coli strain CX04 Replicon: plasmid unnamed2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| J6O07_RS24935 (J6O07_24850) | 40..1146 | + | 1107 | WP_006687059.1 | alkene reductase | - |
| J6O07_RS24940 (J6O07_24855) | 1212..1913 | + | 702 | WP_020277918.1 | DsbA family oxidoreductase | - |
| J6O07_RS24945 (J6O07_24860) | 1979..2752 | + | 774 | WP_004729618.1 | SDR family oxidoreductase | - |
| J6O07_RS24950 (J6O07_24865) | 2938..4161 | - | 1224 | WP_023287190.1 | aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme | - |
| J6O07_RS24955 (J6O07_24870) | 4295..5164 | - | 870 | WP_001567390.1 | DMT family transporter | - |
| J6O07_RS24960 (J6O07_24875) | 5405..6157 | + | 753 | WP_004729622.1 | alpha/beta hydrolase | - |
| J6O07_RS24965 (J6O07_24880) | 6208..6497 | + | 290 | Protein_6 | Tn3 family transposase | - |
| J6O07_RS24970 (J6O07_24885) | 6597..7601 | + | 1005 | WP_000427623.1 | IS110 family transposase IS4321R | Transposase |
| J6O07_RS24975 (J6O07_24890) | 7976..8242 | + | 267 | WP_001567383.1 | DUF1471 domain-containing protein | - |
| J6O07_RS24980 (J6O07_24895) | 8339..8896 | + | 558 | WP_001567382.1 | hypothetical protein | VF |
| J6O07_RS24985 (J6O07_24900) | 9109..9369 | + | 261 | WP_001567381.1 | DUF1471 domain-containing protein | - |
| J6O07_RS24990 (J6O07_24905) | 9400..9906 | + | 507 | WP_001567380.1 | DUF417 family protein | - |
| J6O07_RS24995 (J6O07_24910) | 9980..10117 | + | 138 | WP_021243014.1 | hypothetical protein | - |
| J6O07_RS25000 (J6O07_24915) | 10141..10602 | + | 462 | WP_021243015.1 | Peptide methionine sulfoxide reductase MsrB | VF |
| J6O07_RS25005 (J6O07_24920) | 10592..11086 | + | 495 | WP_021243016.1 | Peptide methionine sulfoxide reductase MsrA 3 | VF |
| J6O07_RS25010 (J6O07_24925) | 11791..12087 | + | 297 | WP_162997146.1 | hypothetical protein | - |
| J6O07_RS25015 (J6O07_24930) | 12225..12488 | + | 264 | WP_000072676.1 | hypothetical protein | - |
| J6O07_RS25020 (J6O07_24935) | 12478..12777 | + | 300 | WP_021243018.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| J6O07_RS25025 (J6O07_24940) | 12839..13135 | - | 297 | WP_223610887.1 | entry exclusion protein 1 | - |
| J6O07_RS25030 (J6O07_24945) | 13273..13452 | + | 180 | WP_021243020.1 | Rop family plasmid primer RNA-binding protein | - |
| J6O07_RS25035 (J6O07_24950) | 13483..13746 | - | 264 | WP_021243021.1 | hypothetical protein | - |
| J6O07_RS25040 (J6O07_24955) | 14191..14895 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| J6O07_RS25045 (J6O07_24960) | 14949..15713 | + | 765 | Protein_22 | IS4 family transposase IS421 | Transposase |
| J6O07_RS25050 (J6O07_24965) | 15906..16025 | - | 120 | WP_223610890.1 | type I toxin-antitoxin system Hok family toxin | - |
| J6O07_RS25055 | 15973..16083 | - | 111 | Protein_24 | FlmC family protein | - |
| J6O07_RS25065 (J6O07_24975) | 17328..17666 | + | 339 | WP_061353995.1 | hypothetical protein | - |
| J6O07_RS25070 (J6O07_24980) | 17984..18844 | + | 861 | WP_001076427.1 | replication protein RepA | - |
| J6O07_RS25075 (J6O07_24985) | 19244..20449 | + | 1206 | WP_000817632.1 | Plasmid partition protein A | VF |
| J6O07_RS25080 (J6O07_24990) | 20446..21411 | + | 966 | WP_000725192.1 | ParB family protein | - |
| J6O07_RS25085 (J6O07_24995) | 21676..23382 | + | 1707 | WP_001514463.1 | hypothetical protein | - |
| J6O07_RS25090 (J6O07_25000) | 23442..25031 | + | 1590 | WP_033546052.1 | hypothetical protein | - |
| J6O07_RS25095 (J6O07_25005) | 25041..25856 | + | 816 | WP_001514461.1 | hypothetical protein | - |
| J6O07_RS25100 (J6O07_25010) | 25892..26473 | + | 582 | WP_033546054.1 | hypothetical protein | - |
| J6O07_RS25105 (J6O07_25015) | 26485..26994 | + | 510 | WP_054622924.1 | hypothetical protein | - |
| J6O07_RS25110 (J6O07_25020) | 27270..28381 | - | 1112 | Protein_35 | IS4 family transposase IS186B | Transposase |
| J6O07_RS25115 (J6O07_25025) | 28459..28614 | - | 156 | WP_001313475.1 | type I toxin-antitoxin system toxin HokD | - |
| J6O07_RS25120 (J6O07_25030) | 28949..29794 | - | 846 | WP_054622904.1 | helix-turn-helix domain-containing protein | - |
| J6O07_RS25125 (J6O07_25035) | 29824..30624 | - | 801 | WP_001187875.1 | phage antirepressor KilAC domain-containing protein | - |
| J6O07_RS25130 (J6O07_25040) | 30788..31390 | - | 603 | Protein_39 | phage antirepressor KilAC domain-containing protein | - |
| J6O07_RS25140 (J6O07_25050) | 32140..32577 | - | 438 | WP_054622800.1 | hypothetical protein | Relaxase |
| J6O07_RS25145 (J6O07_25055) | 32588..33310 | - | 723 | WP_039022034.1 | hypothetical protein | - |
| J6O07_RS25150 (J6O07_25060) | 33544..34548 | + | 1005 | WP_000427614.1 | IS110 family transposase IS5075 | Transposase |
| J6O07_RS25155 (J6O07_25065) | 34730..35119 | - | 390 | WP_001567989.1 | hypothetical protein | - |
| J6O07_RS25160 (J6O07_25070) | 36146..36697 | + | 552 | WP_223610888.1 | hypothetical protein | - |
| J6O07_RS25165 (J6O07_25075) | 36731..37428 | + | 698 | WP_223610889.1 | IS1 family transposase | - |
| J6O07_RS25170 (J6O07_25080) | 37574..38368 | - | 795 | WP_016240356.1 | site-specific integrase | - |
| J6O07_RS25175 (J6O07_25085) | 38566..39581 | - | 1016 | Protein_48 | hypothetical protein | - |
| J6O07_RS25180 (J6O07_25090) | 39751..40056 | - | 306 | WP_016240353.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| J6O07_RS25185 (J6O07_25095) | 40058..40276 | - | 219 | WP_016240352.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| J6O07_RS25190 (J6O07_25100) | 40876..41106 | + | 231 | WP_001261283.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| J6O07_RS25195 (J6O07_25105) | 41103..41519 | + | 417 | WP_032192044.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| J6O07_RS25200 (J6O07_25110) | 41555..41806 | + | 252 | WP_105966327.1 | hypothetical protein | - |
| J6O07_RS25205 (J6O07_25115) | 41887..42987 | - | 1101 | WP_032192045.1 | NADH:flavin oxidoreductase/NADH oxidase | - |
| J6O07_RS25210 (J6O07_25120) | 44309..45652 | - | 1344 | WP_032192047.1 | APC family permease | - |
| J6O07_RS25215 (J6O07_25125) | 45649..46560 | - | 912 | WP_032192052.1 | acetamidase/formamidase family protein | - |
| J6O07_RS25220 (J6O07_25130) | 46720..47424 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| J6O07_RS25225 (J6O07_25135) | 47642..47998 | - | 357 | WP_000215515.1 | cupin domain-containing protein | - |
| J6O07_RS25230 (J6O07_25140) | 47988..48389 | - | 402 | WP_001293886.1 | DUF86 domain-containing protein | - |
| J6O07_RS25235 (J6O07_25145) | 48386..48676 | - | 291 | WP_001247892.1 | nucleotidyltransferase | - |
| J6O07_RS25240 (J6O07_25150) | 48941..49645 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| J6O07_RS25245 (J6O07_25155) | 49698..51956 | - | 2259 | Protein_62 | molybdopterin-dependent oxidoreductase | - |
| J6O07_RS25250 (J6O07_25160) | 51949..52971 | - | 1023 | WP_016239794.1 | tetrathionate reductase subunit TtrC | - |
| J6O07_RS25255 (J6O07_25165) | 52972..53724 | - | 753 | WP_077910396.1 | tetrathionate reductase subunit TtrB | - |
| J6O07_RS25260 (J6O07_25170) | 53934..55667 | + | 1734 | WP_077947784.1 | Tetrathionate sensor histidine kinase TtrS | VF |
| J6O07_RS25265 (J6O07_25175) | 55642..56226 | + | 585 | WP_000974596.1 | Tetrathionate response regulatory protein TtrR | VF |
| J6O07_RS25270 (J6O07_25180) | 56319..56522 | + | 204 | WP_000528119.1 | fumarate hydratase FumD | - |
| J6O07_RS25275 (J6O07_25185) | 56631..57611 | - | 981 | WP_016240301.1 | IS5 family transposase IS5D | Transposase |
| J6O07_RS25280 (J6O07_25190) | 57665..58896 | + | 1232 | WP_102596106.1 | IS3 family transposase IS2 | Transposase |
| J6O07_RS25285 (J6O07_25195) | 58903..59283 | + | 381 | Protein_70 | IS200/IS605 family transposase | - |
| J6O07_RS25290 (J6O07_25200) | 59517..60193 | + | 677 | WP_112793525.1 | IS1 family transposase | - |
| J6O07_RS25295 (J6O07_25205) | 60176..60646 | - | 471 | Protein_72 | IS30 family transposase IS30D | Transposase |
| J6O07_RS25300 (J6O07_25210) | 60714..60971 | - | 258 | Protein_73 | IS3 family transposase IS911 | Transposase |
| J6O07_RS25305 (J6O07_25215) | 61097..61261 | + | 165 | WP_000679356.1 | hypothetical protein | - |
| J6O07_RS25310 (J6O07_25220) | 61295..61735 | + | 441 | WP_000258162.1 | hypothetical protein | - |
| J6O07_RS25315 (J6O07_25225) | 61732..61980 | + | 249 | WP_000747846.1 | hypothetical protein | - |
| J6O07_RS25320 (J6O07_25230) | 62019..62639 | - | 621 | WP_223610885.1 | helix-turn-helix domain-containing protein | - |
| J6O07_RS25325 (J6O07_25235) | 62674..63654 | + | 981 | WP_000019403.1 | IS5 family transposase IS5D | Transposase |
| J6O07_RS25330 (J6O07_25240) | 63884..64342 | + | 459 | WP_223610886.1 | EAL domain-containing protein | - |
| J6O07_RS25335 (J6O07_25245) | 64396..65151 | - | 756 | WP_072134454.1 | hypothetical protein | - |
| J6O07_RS25340 (J6O07_25250) | 65230..65786 | - | 557 | Protein_81 | Ref family protein | - |
| J6O07_RS25345 (J6O07_25260) | 66028..66339 | - | 312 | WP_001224247.1 | hypothetical protein | - |
| J6O07_RS25350 (J6O07_25265) | 66390..67421 | - | 1032 | WP_000067528.1 | site-specific integrase | - |
| J6O07_RS25355 (J6O07_25270) | 67429..67650 | - | 222 | WP_000542335.1 | hypothetical protein | - |
| J6O07_RS25360 (J6O07_25275) | 68255..68464 | + | 210 | WP_016240428.1 | hypothetical protein | - |
| J6O07_RS25365 (J6O07_25280) | 68575..69426 | + | 852 | WP_016240427.1 | phage repressor protein C1 | - |
| J6O07_RS25370 (J6O07_25285) | 69459..69704 | - | 246 | Protein_87 | phage antirepressor KilAC domain-containing protein | - |
| J6O07_RS25375 (J6O07_25290) | 69740..70324 | - | 585 | Protein_88 | Tn3 family transposase ISEc63 | Transposase |
| J6O07_RS25380 (J6O07_25295) | 70377..71081 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| J6O07_RS25385 (J6O07_25300) | 71147..72070 | - | 924 | Protein_90 | IS6 family transposase IS15 | Transposase |
| J6O07_RS25390 (J6O07_25305) | 72156..72608 | - | 453 | WP_053263817.1 | Late promoter-activating protein | - |
| J6O07_RS25395 (J6O07_25310) | 72697..73740 | - | 1044 | WP_054622888.1 | DUF968 domain-containing protein | - |
| J6O07_RS25400 (J6O07_25315) | 73768..73947 | - | 180 | WP_001339207.1 | hypothetical protein | - |
| J6O07_RS25405 (J6O07_25320) | 73952..74332 | - | 381 | WP_001216034.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| J6O07_RS25410 (J6O07_25325) | 74332..74553 | - | 222 | WP_001190712.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| J6O07_RS25415 (J6O07_25330) | 74720..75424 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| J6O07_RS25420 (J6O07_25335) | 75480..75776 | - | 297 | Protein_97 | IS481 family transposase ISAzs36 | Transposase |
| J6O07_RS25425 (J6O07_25340) | 75828..76532 | - | 705 | WP_001572363.1 | IS6 family transposase IS26 | Transposase |
| J6O07_RS25430 (J6O07_25345) | 76686..77708 | + | 1023 | WP_001572362.1 | IS110 family transposase IS1618 | Transposase |
| J6O07_RS25435 (J6O07_25350) | 78754..79083 | + | 330 | WP_000493286.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| J6O07_RS25440 (J6O07_25355) | 79064..79345 | + | 282 | WP_000780222.1 | helix-turn-helix transcriptional regulator | - |
| J6O07_RS25450 (J6O07_25365) | 80372..80569 | - | 198 | WP_000843494.1 | DUF2933 domain-containing protein | - |
| J6O07_RS25455 (J6O07_25370) | 80610..83084 | - | 2475 | WP_139153868.1 | Ag(+)-translocating P-type ATPase SilP | - |
| J6O07_RS25460 (J6O07_25375) | 83182..83622 | - | 441 | WP_001549797.1 | DUF411 domain-containing protein | - |
| J6O07_RS25465 (J6O07_25380) | 83708..86854 | - | 3147 | WP_032231520.1 | Cu(+)/Ag(+) efflux RND transporter permease subunit SilA | - |
| J6O07_RS25470 (J6O07_25385) | 86865..88157 | - | 1293 | WP_042946269.1 | Cu(+)/Ag(+) efflux RND transporter periplasmic adaptor subunit SilB | - |
| J6O07_RS25475 (J6O07_25390) | 88271..88624 | - | 354 | WP_001246153.1 | cation efflux system protein CusF | - |
| J6O07_RS25480 (J6O07_25395) | 88653..89918 | - | 1266 | Protein_109 | Cation efflux system protein CusC | VF |
| J6O07_RS25485 (J6O07_25400) | 89976..90680 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| J6O07_RS25490 (J6O07_25405) | 90744..91592 | - | 849 | Protein_111 | Tn3 family transposase TnpA_ISSba14 | Transposase |
| J6O07_RS25495 (J6O07_25410) | 91752..92336 | + | 585 | WP_012695450.1 | Tn3 family transposase TnpR_ISYps3 | Transposase |
| J6O07_RS25500 (J6O07_25415) | 92521..93078 | + | 558 | WP_000108589.1 | OsmC family protein | - |
| J6O07_RS25505 (J6O07_25420) | 93220..93801 | + | 582 | WP_020277920.1 | HTH-type transcriptional repressor NemR | VF |
| J6O07_RS25510 (J6O07_25425) | 93806..94144 | + | 339 | WP_021242988.1 | carboxymuconolactone decarboxylase family protein | - |
| J6O07_RS25515 (J6O07_25430) | 94174..94503 | - | 330 | WP_002431133.1 | thioredoxin family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|