MGE detailed information
MGE type: Genomic_island MGE length: 26806 bp
Accession: NZ_CP081713 Location: 4409832..4436637 Organism: Escherichia coli strain CX04 Replicon: chromosome
Accession: NZ_CP081713 Location: 4409832..4436637 Organism: Escherichia coli strain CX04 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| J6O07_RS21585 (4406274) | 4406274..4406993 | + | 720 | WP_001102105.1 | (Fe-S)-binding protein | - |
| J6O07_RS21590 (4407004) | 4407004..4408431 | + | 1428 | WP_001547749.1 | LutB/LldF family L-lactate oxidation iron-sulfur protein | - |
| J6O07_RS21595 (4408424) | 4408424..4409119 | + | 696 | WP_000370411.1 | lactate utilization protein C | - |
| J6O07_RS21600 (4409169) | 4409169..4409582 | - | 414 | Protein_4234 | gluconate permease | - |
| J6O07_RS21605 (4409832) | 4409832..4410812 | + | 981 | WP_001547750.1 | IS5 family transposase ISKpn26 | Transposase |
| J6O07_RS21610 (4410961) | 4410961..4411653 | + | 693 | Protein_4236 | Tyrosine-protein kinase etk | VF |
| J6O07_RS21615 (4411773) | 4411773..4413071 | - | 1299 | WP_016239723.1 | bifunctional acid phosphatase/4-phytase | - |
| J6O07_RS21620 (4413151) | 4413151..4413243 | - | 93 | WP_000270305.1 | cytochrome bd-II oxidase subunit CbdX | - |
| J6O07_RS21625 (4413256) | 4413256..4414392 | - | 1137 | WP_000460803.1 | cytochrome d ubiquinol oxidase subunit II | - |
| J6O07_RS21630 (4414404) | 4414404..4415363 | - | 960 | Protein_4240 | cytochrome ubiquinol oxidase subunit I | - |
| J6O07_RS21640 (4415901) | 4415901..4416512 | - | 612 | WP_001547754.1 | inovirus Gp2 family protein | - |
| J6O07_RS21645 (4416917) | 4416917..4417123 | - | 207 | WP_001547758.1 | AlpA family phage regulatory protein | - |
| J6O07_RS21650 (4417573) | 4417573..4418499 | + | 927 | WP_001547760.1 | hypothetical protein | - |
| J6O07_RS21655 (4418606) | 4418606..4419469 | + | 864 | WP_016239725.1 | GTPase family protein | - |
| J6O07_RS21660 (4419561) | 4419561..4420382 | + | 822 | WP_223610821.1 | DUF932 domain-containing protein | - |
| J6O07_RS21665 (4420599) | 4420599..4421300 | + | 702 | WP_016239437.1 | WYL domain-containing protein | - |
| J6O07_RS21670 (4421341) | 4421341..4421577 | + | 237 | WP_001144031.1 | protein YpjK | - |
| J6O07_RS21675 (4421577) | 4421577..4422020 | + | 444 | WP_001547764.1 | lipoprotein YafY | - |
| J6O07_RS21680 (4422043) | 4422043..4422510 | + | 468 | WP_001385283.1 | protein YkfB | - |
| J6O07_RS21685 (4422587) | 4422587..4422826 | + | 240 | WP_000194654.1 | DUF905 family protein | - |
| J6O07_RS21690 (4422924) | 4422924..4423382 | + | 459 | WP_000211838.1 | antirestriction protein | - |
| J6O07_RS21695 (4423398) | 4423398..4423874 | + | 477 | WP_000811693.1 | RadC family protein | - |
| J6O07_RS21700 (4423883) | 4423883..4424104 | + | 222 | WP_000691994.1 | DUF987 domain-containing protein | - |
| J6O07_RS21705 (4424123) | 4424123..4424449 | + | 327 | WP_001548930.1 | type IV toxin-antitoxin system antitoxin YafW | Antitoxin Detail |
| J6O07_RS21710 (4424539) | 4424539..4424916 | + | 378 | WP_000854726.1 | TA system toxin CbtA family protein | Toxin Detail |
| J6O07_RS21715 (4424913) | 4424913..4425401 | + | 489 | WP_001547769.1 | DUF5983 family protein | - |
| J6O07_RS21720 (4425413) | 4425413..4425610 | + | 198 | WP_000839269.1 | DUF957 domain-containing protein | - |
| J6O07_RS21725 (4425695) | 4425695..4426537 | + | 843 | WP_001547770.1 | DUF4942 domain-containing protein | - |
| J6O07_RS21730 (4427286) | 4427286..4428824 | + | 1539 | WP_001187177.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| J6O07_RS21735 (4429190) | 4429190..4430524 | + | 1335 | WP_099483623.1 | cadaverine/lysine antiporter | - |
| J6O07_RS21740 (4430604) | 4430604..4432751 | + | 2148 | WP_001295383.1 | lysine decarboxylase CadA | - |
| J6O07_RS21745 (4432810) | 4432810..4434267 | + | 1458 | WP_000856829.1 | dipeptide/tripeptide permease DtpC | - |
| J6O07_RS21750 (4434504) | 4434504..4436021 | + | 1518 | WP_001295074.1 | lysine--tRNA ligase | - |
| J6O07_RS21755 (4436140) | 4436140..4436313 | - | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| J6O07_RS21760 (4436341) | 4436341..4436637 | - | 297 | WP_001425728.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| J6O07_RS21765 (4436864) | 4436864..4437136 | - | 273 | WP_000405647.1 | GNAT family N-acetyltransferase | - |
| J6O07_RS21770 (4437148) | 4437148..4437378 | - | 231 | WP_000371700.1 | 4Fe-4S mono-cluster protein YjdI | - |
| J6O07_RS21775 (4437559) | 4437559..4439190 | + | 1632 | WP_001216486.1 | sensor histidine kinase | - |
| J6O07_RS21780 (4439187) | 4439187..4439906 | + | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|