MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 61764 bp
Accession: NZ_CP081698 Location: 1059671..1121434 Organism: Escherichia coli strain CT02 Replicon: chromosome
Accession: NZ_CP081698 Location: 1059671..1121434 Organism: Escherichia coli strain CT02 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| J6N91_RS05090 (1055106) | 1055106..1055585 | + | 480 | WP_001219242.1 | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase | - |
| J6N91_RS05095 (1055582) | 1055582..1056631 | + | 1050 | WP_000568924.1 | tRNA pseudouridine(13) synthase TruD | - |
| J6N91_RS05100 (1056612) | 1056612..1057373 | + | 762 | WP_001295182.1 | 5'/3'-nucleotidase SurE | - |
| J6N91_RS05105 (1057367) | 1057367..1057993 | + | 627 | WP_000254708.1 | protein-L-isoaspartate O-methyltransferase | - |
| J6N91_RS05110 (1058133) | 1058133..1059272 | + | 1140 | WP_001272592.1 | murein hydrolase activator NlpD | - |
| J6N91_RS05115 (1059335) | 1059335..1060327 | + | 993 | WP_000081550.1 | RNA polymerase sigma factor RpoS | - |
| J6N91_RS05120 (1060421) | 1060421..1061785 | - | 1365 | WP_000104459.1 | GntP family transporter | - |
| J6N91_RS05125 (1061874) | 1061874..1062650 | - | 777 | WP_001136925.1 | HPr family phosphocarrier protein | - |
| J6N91_RS05130 (1062655) | 1062655..1063293 | - | 639 | WP_001278994.1 | aldolase | - |
| J6N91_RS05135 (1063290) | 1063290..1064552 | - | 1263 | WP_021553822.1 | four-carbon acid sugar kinase family protein | - |
| J6N91_RS05140 (1064549) | 1064549..1065457 | - | 909 | WP_000847974.1 | NAD(P)-dependent oxidoreductase | - |
| J6N91_RS05145 (1065653) | 1065653..1066420 | + | 768 | WP_001300386.1 | DNA-binding transcriptional repressor YgbI | - |
| J6N91_RS05150 (1066471) | 1066471..1067127 | - | 657 | WP_001141341.1 | protein-serine/threonine phosphatase | - |
| J6N91_RS05155 (1067233) | 1067233..1069800 | - | 2568 | WP_089683204.1 | DNA mismatch repair protein MutS | - |
| J6N91_RS05160 (1069960) | 1069960..1071423 | + | 1464 | WP_024195068.1 | hypothetical protein ; Integrase | Integrase |
| J6N91_RS05165 (1071420) | 1071420..1072010 | + | 591 | WP_042945971.1 | hypothetical protein | - |
| J6N91_RS05170 (1072459) | 1072459..1073319 | + | 861 | WP_047663970.1 | replication initiation protein | - |
| J6N91_RS05175 (1073316) | 1073316..1073570 | + | 255 | WP_001513942.1 | hypothetical protein | - |
| J6N91_RS05180 (1073728) | 1073728..1074141 | + | 414 | WP_048962675.1 | hypothetical protein | - |
| J6N91_RS05185 (1074330) | 1074330..1074974 | - | 645 | WP_223602089.1 | hypothetical protein | - |
| J6N91_RS05190 (1075288) | 1075288..1076514 | - | 1227 | WP_223602090.1 | relaxase/mobilization nuclease domain-containing protein | - |
| J6N91_RS05195 (1076492) | 1076492..1076917 | - | 426 | WP_223602091.1 | hypothetical protein | - |
| J6N91_RS05200 (1077073) | 1077073..1077369 | + | 297 | WP_223602092.1 | hypothetical protein | - |
| J6N91_RS05205 (1077662) | 1077662..1078291 | + | 630 | WP_001513936.1 | hypothetical protein | - |
| J6N91_RS05210 (1078380) | 1078380..1079285 | - | 906 | WP_029701605.1 | hypothetical protein | - |
| J6N91_RS05215 (1079313) | 1079313..1079744 | - | 432 | WP_223602093.1 | Mov34/MPN/PAD-1 family protein | - |
| J6N91_RS05220 (1079794) | 1079794..1081668 | - | 1875 | WP_072058576.1 | ThiF family adenylyltransferase | - |
| J6N91_RS05225 (1081661) | 1081661..1082815 | - | 1155 | WP_029701610.1 | hypothetical protein | - |
| J6N91_RS05230 (1083476) | 1083476..1083610 | + | 135 | WP_000611926.1 | hypothetical protein | - |
| J6N91_RS05235 (1083687) | 1083687..1084040 | + | 354 | WP_000015499.1 | nitrous oxide-stimulated promoter family protein | - |
| J6N91_RS05240 (1084077) | 1084077..1086155 | - | 2079 | WP_001297144.1 | hypothetical protein | VF |
| J6N91_RS05245 (1086229) | 1086229..1087239 | - | 1011 | WP_001059910.1 | hydrogenase maturation carbamoyl dehydratase HypE | - |
| J6N91_RS05250 (1087236) | 1087236..1088357 | - | 1122 | WP_001212982.1 | hydrogenase formation protein HypD | - |
| J6N91_RS05255 (1088357) | 1088357..1088629 | - | 273 | WP_000334881.1 | hydrogenase 3 maturation protein HypC | - |
| J6N91_RS05260 (1088620) | 1088620..1089492 | - | 873 | WP_000337665.1 | hydrogenase nickel incorporation protein HypB | - |
| J6N91_RS05265 (1089496) | 1089496..1089846 | - | 351 | WP_001299100.1 | hydrogenase maturation nickel metallochaperone HypA | - |
| J6N91_RS05270 (1090058) | 1090058..1090519 | + | 462 | WP_000158056.1 | formate hydrogenlyase regulator HycA | - |
| J6N91_RS05275 (1090644) | 1090644..1091255 | + | 612 | WP_001079186.1 | formate hydrogenlyase subunit HycB | - |
| J6N91_RS05280 (1091252) | 1091252..1093078 | + | 1827 | WP_001274422.1 | formate hydrogenlyase subunit 3 | - |
| J6N91_RS05285 (1093081) | 1093081..1094004 | + | 924 | WP_000115200.1 | formate hydrogenlyase subunit HycD | - |
| J6N91_RS05290 (1094022) | 1094022..1095731 | + | 1710 | WP_001288134.1 | formate hydrogenlyase subunit HycE | - |
| J6N91_RS05295 (1095741) | 1095741..1096283 | + | 543 | WP_000493792.1 | formate hydrogenlyase subunit HycF | - |
| J6N91_RS05300 (1096283) | 1096283..1097050 | + | 768 | WP_000067401.1 | formate hydrogenlyase subunit HycG | - |
| J6N91_RS05305 (1097047) | 1097047..1097457 | + | 411 | WP_223602094.1 | formate hydrogenlyase assembly protein HycH | - |
| J6N91_RS05310 (1097450) | 1097450..1097920 | + | 471 | WP_000132961.1 | hydrogenase maturation peptidase HycI | - |
| J6N91_RS05315 (1097945) | 1097945..1098706 | + | 762 | WP_042202360.1 | hypothetical protein | - |
| J6N91_RS05320 (1098880) | 1098880..1099191 | + | 312 | WP_000547564.1 | type II toxin-antitoxin system HigB family toxin | Toxin Detail |
| J6N91_RS05325 (1099188) | 1099188..1099607 | + | 420 | WP_000126294.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| J6N91_RS05330 (1099721) | 1099721..1101145 | - | 1425 | WP_000110363.1 | 6-phospho-beta-glucosidase AscB | - |
| J6N91_RS05335 (1101154) | 1101154..1102611 | - | 1458 | WP_001107882.1 | PTS cellobiose/arbutin/salicin transporter subunit IIBC | - |
| J6N91_RS05340 (1102871) | 1102871..1103881 | + | 1011 | WP_001402444.1 | DNA-binding transcriptional regulator AscG | - |
| J6N91_RS05345 (1104030) | 1104030..1104557 | + | 528 | WP_001078777.1 | electron transport protein HydN | - |
| J6N91_RS05350 (1104710) | 1104710..1106962 | + | 2253 | WP_001107640.1 | carbamoyltransferase HypF | - |
| J6N91_RS05355 (1107091) | 1107091..1108224 | - | 1134 | WP_000064730.1 | NADH:flavorubredoxin reductase NorW | - |
| J6N91_RS05360 (1108221) | 1108221..1109660 | - | 1440 | WP_000029617.1 | anaerobic nitric oxide reductase flavorubredoxin | - |
| J6N91_RS05365 (1109847) | 1109847..1111361 | + | 1515 | WP_000010722.1 | hypothetical protein | VF |
| J6N91_RS05370 (1111358) | 1111358..1112323 | - | 966 | WP_001287420.1 | hypothetical protein | VF |
| J6N91_RS05375 (1112316) | 1112316..1113089 | - | 774 | WP_000804550.1 | glucitol operon DNA-binding transcriptional repressor SrlR | - |
| J6N91_RS05380 (1113156) | 1113156..1113515 | - | 360 | WP_000252908.1 | transcriptional regulator GutM | - |
| J6N91_RS05385 (1113620) | 1113620..1114399 | - | 780 | WP_001077358.1 | sorbitol-6-phosphate dehydrogenase | - |
| J6N91_RS05390 (1114403) | 1114403..1114774 | - | 372 | WP_223602095.1 | PTS glucitol/sorbitol transporter subunit IIA | - |
| J6N91_RS05395 (1114785) | 1114785..1115744 | - | 960 | WP_000148875.1 | PTS glucitol/sorbitol transporter subunit IIB | - |
| J6N91_RS05400 (1115741) | 1115741..1116304 | - | 564 | WP_000573321.1 | PTS glucitol/sorbitol transporter subunit IIC | - |
| J6N91_RS05405 (1116560) | 1116560..1117645 | + | 1086 | WP_001295177.1 | lytic murein transglycosylase B | - |
| J6N91_RS05410 (1117790) | 1117790..1118287 | + | 498 | WP_000132231.1 | nicotinamide-nucleotide amidase | - |
| J6N91_RS05415 (1118367) | 1118367..1119428 | + | 1062 | WP_000963143.1 | recombinase RecA | - |
| J6N91_RS05420 (1119671) | 1119671..1120171 | + | 501 | WP_000140506.1 | recombination regulator RecX | - |
| J6N91_RS05425 (1120299) | 1120299..1122929 | + | 2631 | WP_110826301.1 | alanine--tRNA ligase | - |
| J6N91_RS05430 (1123164) | 1123164..1123349 | + | 186 | WP_000906486.1 | carbon storage regulator CsrA | - |
| J6N91_RS05460 (1124943) | 1124943..1125509 | + | 567 | WP_000273309.1 | fructose-1-phosphate/6-phosphogluconate phosphatase | - |
| J6N91_RS05465 (1125506) | 1125506..1125934 | + | 429 | WP_001287454.1 | YqaA family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|