MGE detailed information
MGE type: Prophage MGE length: 65546 bp
Accession: NZ_CP080139 Location: 1628824..1694369 Organism: Escherichia coli strain PK8241 Replicon: chromosome
Accession: NZ_CP080139 Location: 1628824..1694369 Organism: Escherichia coli strain PK8241 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KZY05_RS08430 () | 1624679..1625479 | + | 801 | WP_000406926.1 | PTS mannose transporter subunit IIC | - |
| KZY05_RS08435 () | 1625492..1626343 | + | 852 | WP_000228655.1 | PTS mannose transporter subunit IID | - |
| KZY05_RS08440 () | 1626398..1626856 | + | 459 | WP_000156255.1 | DUF986 family protein | - |
| KZY05_RS29760 () | 1627167..1627289 | + | 123 | WP_000547919.1 | hypothetical protein | - |
| KZY05_RS08445 () | 1627286..1627852 | + | 567 | WP_001296134.1 | manganese efflux pump MntP | - |
| KZY05_RS08450 () | 1627849..1628658 | - | 810 | WP_000010107.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| KZY05_RS08455 () | 1628824..1629033 | - | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| KZY05_RS08460 () | 1629046..1629189 | - | 144 | WP_001295496.1 | DUF2627 domain-containing protein | - |
| KZY05_RS08465 () | 1629858..1630145 | - | 288 | WP_001006866.1 | YebO family protein | - |
| KZY05_RS08470 () | 1630220..1630363 | - | 144 | WP_000714550.1 | PhoP/PhoQ regulator MgrB | - |
| KZY05_RS08475 () | 1630522..1630761 | + | 240 | WP_001211011.1 | YobH family protein | - |
| KZY05_RS08480 () | 1630904..1631695 | - | 792 | WP_001262182.1 | DNA-binding transcriptional regulator KdgR | - |
| KZY05_RS08485 () | 1631872..1633245 | + | 1374 | WP_032202263.1 | MFS transporter | - |
| KZY05_RS08490 () | 1633291..1634172 | - | 882 | WP_000984500.1 | protease HtpX | - |
| KZY05_RS08495 () | 1634364..1636412 | - | 2049 | WP_001315679.1 | carboxy terminal-processing peptidase | - |
| KZY05_RS08500 () | 1636432..1637130 | - | 699 | WP_000431370.1 | RNA chaperone ProQ | - |
| KZY05_RS08505 () | 1637227..1637724 | - | 498 | WP_001043882.1 | L-methionine (R)-S-oxide reductase | - |
| KZY05_RS08510 () | 1637854..1639137 | + | 1284 | WP_001741872.1 | membrane integrity lipid transport subunit YebS | - |
| KZY05_RS08515 () | 1639106..1641739 | + | 2634 | WP_001297532.1 | hypothetical protein | VF |
| KZY05_RS08520 () | 1641819..1643258 | + | 1440 | WP_000057022.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| KZY05_RS08525 () | 1643376..1643612 | + | 237 | WP_001295499.1 | YebV family protein | - |
| KZY05_RS08530 () | 1643717..1643908 | + | 192 | WP_001296140.1 | YebW family protein | - |
| KZY05_RS08535 () | 1643909..1644565 | - | 657 | WP_000812724.1 | protein-serine/threonine phosphatase | - |
| KZY05_RS08540 () | 1645030..1645584 | - | 555 | WP_219788483.1 | Tn3 family transposase TnpR_ISPa38 | Transposase |
| KZY05_RS08545 () | 1645614..1646024 | + | 411 | WP_001559668.1 | hypothetical protein | - |
| KZY05_RS08550 () | 1646045..1646488 | + | 444 | WP_001008239.1 | tail fiber assembly protein | - |
| KZY05_RS08555 () | 1646460..1647062 | - | 603 | WP_001535307.1 | tail fiber assembly protein | - |
| KZY05_RS08560 () | 1647062..1647892 | - | 831 | WP_219788431.1 | phage tail protein | - |
| KZY05_RS08565 () | 1647892..1648572 | - | 681 | WP_000049950.1 | DUF2612 domain-containing protein | - |
| KZY05_RS08570 () | 1648569..1649768 | - | 1200 | WP_001197069.1 | baseplate J/gp47 family protein | - |
| KZY05_RS08575 () | 1649768..1650121 | - | 354 | WP_001270636.1 | hypothetical protein | - |
| KZY05_RS08580 () | 1650121..1650876 | - | 756 | WP_219788432.1 | Gp138 family membrane-puncturing spike protein | - |
| KZY05_RS08585 () | 1650937..1651317 | - | 381 | WP_219788433.1 | hypothetical protein | - |
| KZY05_RS08590 () | 1651314..1652087 | - | 774 | WP_062898041.1 | hypothetical protein | - |
| KZY05_RS08595 () | 1652315..1652650 | - | 336 | WP_000755137.1 | hypothetical protein | - |
| KZY05_RS08600 () | 1652647..1653681 | - | 1035 | WP_059337470.1 | hypothetical protein | - |
| KZY05_RS08605 () | 1653684..1653986 | - | 303 | WP_000648663.1 | hypothetical protein | - |
| KZY05_RS08610 () | 1653990..1654640 | - | 651 | WP_219788434.1 | hypothetical protein | - |
| KZY05_RS08615 () | 1654640..1656592 | - | 1953 | WP_219788435.1 | lytic transglycosylase catalytic | - |
| KZY05_RS29330 () | 1656582..1656758 | - | 177 | WP_023141050.1 | hypothetical protein | - |
| KZY05_RS08620 () | 1656770..1657222 | - | 453 | WP_219788436.1 | hypothetical protein | - |
| KZY05_RS08625 () | 1657226..1657666 | - | 441 | WP_219788437.1 | DUF3277 family protein | - |
| KZY05_RS08630 () | 1657677..1658822 | - | 1146 | WP_160379676.1 | DUF3383 family protein | - |
| KZY05_RS08635 () | 1658826..1659389 | - | 564 | WP_033544654.1 | hypothetical protein | - |
| KZY05_RS08640 () | 1659364..1659753 | - | 390 | WP_001142480.1 | hypothetical protein | - |
| KZY05_RS08645 () | 1659740..1660294 | - | 555 | WP_040091340.1 | hypothetical protein | - |
| KZY05_RS08650 () | 1660291..1660698 | - | 408 | WP_219788438.1 | DUF4054 domain-containing protein | - |
| KZY05_RS08655 () | 1660697..1660915 | + | 219 | Protein_1710 | hypothetical protein | - |
| KZY05_RS08660 () | 1660926..1661867 | - | 942 | WP_219788439.1 | DUF2184 domain-containing protein | - |
| KZY05_RS08665 () | 1661879..1662385 | - | 507 | WP_001066727.1 | hypothetical protein | - |
| KZY05_RS08670 () | 1662389..1663609 | - | 1221 | WP_000873186.1 | DUF2213 domain-containing protein | - |
| KZY05_RS08675 () | 1663624..1664358 | - | 735 | WP_214144386.1 | phage minor head protein | - |
| KZY05_RS08680 () | 1664249..1665715 | - | 1467 | WP_001551494.1 | DUF1073 domain-containing protein | - |
| KZY05_RS08685 () | 1665715..1667118 | - | 1404 | WP_004010966.1 | PBSX family phage terminase large subunit | - |
| KZY05_RS08690 () | 1667084..1667833 | - | 750 | WP_219788440.1 | hypothetical protein | - |
| KZY05_RS08695 () | 1667891..1668076 | - | 186 | WP_219788441.1 | hypothetical protein | - |
| KZY05_RS29335 () | 1668057..1668332 | - | 276 | WP_232380417.1 | hypothetical protein | - |
| KZY05_RS08700 () | 1668220..1668612 | - | 393 | WP_061336085.1 | DUF2570 domain-containing protein | - |
| KZY05_RS08705 () | 1668596..1669072 | - | 477 | WP_001194115.1 | glycoside hydrolase family protein | - |
| KZY05_RS08710 () | 1669076..1669417 | - | 342 | WP_000781775.1 | phage holin, lambda family | - |
| KZY05_RS08715 () | 1669635..1669913 | + | 279 | WP_021517984.1 | hypothetical protein | - |
| KZY05_RS08720 () | 1669899..1670129 | - | 231 | WP_096935363.1 | hypothetical protein | - |
| KZY05_RS08725 () | 1670267..1670824 | - | 558 | WP_024222756.1 | ORF6N domain-containing protein | - |
| KZY05_RS08730 () | 1671098..1671652 | - | 555 | WP_219788442.1 | DUF1133 family protein | - |
| KZY05_RS08735 () | 1671649..1671939 | - | 291 | WP_000228018.1 | DUF1364 domain-containing protein | - |
| KZY05_RS08740 () | 1671939..1672538 | - | 600 | WP_160539082.1 | DUF1367 family protein | - |
| KZY05_RS08745 () | 1673097..1673249 | - | 153 | WP_001585819.1 | Hok/Gef family protein | - |
| KZY05_RS08750 () | 1673542..1674108 | - | 567 | WP_219788443.1 | DUF551 domain-containing protein | - |
| KZY05_RS29340 () | 1674400..1674687 | - | 288 | Protein_1731 | hypothetical protein | - |
| KZY05_RS08760 () | 1674783..1675139 | - | 357 | WP_219788484.1 | hypothetical protein | - |
| KZY05_RS08765 () | 1675197..1675618 | - | 422 | Protein_1733 | DUF977 family protein | - |
| KZY05_RS08770 () | 1675634..1676383 | - | 750 | WP_140441906.1 | DUF1627 domain-containing protein | - |
| KZY05_RS08775 () | 1676406..1677152 | - | 747 | WP_219788446.1 | ATP-binding protein | - |
| KZY05_RS08780 () | 1677159..1677944 | - | 786 | WP_232380424.1 | hypothetical protein | - |
| KZY05_RS08785 () | 1678367..1678789 | - | 423 | WP_000702025.1 | toxin YdaT family protein | - |
| KZY05_RS08790 () | 1678786..1679028 | - | 243 | WP_001033914.1 | helix-turn-helix transcriptional regulator | - |
| KZY05_RS08795 () | 1679125..1679544 | + | 420 | WP_000410107.1 | helix-turn-helix domain-containing protein | - |
| KZY05_RS08800 () | 1679851..1680003 | + | 153 | WP_000379561.1 | DUF1391 family protein | - |
| KZY05_RS08805 () | 1680415..1680636 | + | 222 | WP_000560227.1 | cell division protein FtsZ | - |
| KZY05_RS08810 () | 1680636..1680806 | + | 171 | WP_001359121.1 | YdaE family protein | - |
| KZY05_RS08815 () | 1680881..1681156 | + | 276 | WP_001452559.1 | hypothetical protein | - |
| KZY05_RS08820 () | 1681256..1683931 | + | 2676 | WP_137460733.1 | exodeoxyribonuclease VIII | - |
| KZY05_RS08825 () | 1683924..1684733 | + | 810 | WP_219788448.1 | recombination protein RecT | - |
| KZY05_RS08830 () | 1684790..1684984 | + | 195 | WP_042853000.1 | type I toxin-antitoxin system endodeoxyribonuclease toxin RalR | - |
| KZY05_RS08835 () | 1684977..1685165 | + | 189 | WP_001356607.1 | DUF1187 family protein | - |
| - () | 1684983..1685161 | - | 179 | NuclAT_1 | - | - |
| - () | 1684983..1685161 | - | 179 | NuclAT_1 | - | - |
| - () | 1684983..1685161 | - | 179 | NuclAT_1 | - | - |
| - () | 1684983..1685161 | - | 179 | NuclAT_1 | - | - |
| KZY05_RS08840 () | 1685272..1685553 | + | 282 | WP_001311878.1 | excisionase | - |
| KZY05_RS08845 () | 1685519..1686595 | + | 1077 | WP_033544538.1 | hypothetical protein ; Integrase | Integrase |
| - | 1686726..1686960 | + | 235 | - | - | Antitoxin Detail |
| - | 1686727..1686830 | - | 104 | - | - | Toxin Detail |
| KZY05_RS08850 () | 1686987..1687328 | - | 342 | WP_000976472.1 | YebY family protein | - |
| KZY05_RS08855 () | 1687341..1688213 | - | 873 | WP_069722788.1 | copper homeostasis membrane protein CopD | - |
| KZY05_RS08860 () | 1688217..1688591 | - | 375 | WP_000255065.1 | CopC domain-containing protein YobA | - |
| KZY05_RS08865 () | 1688730..1688960 | + | 231 | WP_000916763.1 | DNA polymerase III subunit theta | - |
| KZY05_RS08870 () | 1689062..1689718 | + | 657 | WP_000011658.1 | carbon-nitrogen hydrolase family protein YobB | - |
| KZY05_RS08875 () | 1689742..1690404 | + | 663 | WP_000944256.1 | exodeoxyribonuclease X | - |
| KZY05_RS08880 () | 1690401..1692461 | - | 2061 | WP_000936927.1 | oligopeptidase B | - |
| KZY05_RS08885 () | 1692670..1693329 | - | 660 | WP_000024745.1 | tellurite resistance TerB family protein | - |
| KZY05_RS08890 () | 1693656..1694012 | - | 357 | WP_001295500.1 | protein YebF | - |
| KZY05_RS08895 () | 1694079..1694369 | - | 291 | WP_000257738.1 | DNA damage-inducible protein YebG | - |
| KZY05_RS08900 () | 1694503..1695681 | + | 1179 | WP_000173474.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| KZY05_RS08905 () | 1695737..1696378 | - | 642 | WP_000800512.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| KZY05_RS08910 () | 1696415..1698226 | - | 1812 | WP_001069467.1 | phosphogluconate dehydratase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|