MGE detailed information
MGE type: Prophage MGE length: 53000 bp
Accession: NZ_CP080133 Location: 1956640..2009639 Organism: Escherichia coli strain PK8277 Replicon: chromosome
Accession: NZ_CP080133 Location: 1956640..2009639 Organism: Escherichia coli strain PK8277 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KZY04_RS09390 () | 1953726..1954697 | - | 972 | WP_000564725.1 | tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB | - |
| KZY04_RS09395 () | 1954694..1955437 | - | 744 | WP_000019590.1 | carboxy-S-adenosyl-L-methionine synthase CmoA | - |
| KZY04_RS09400 () | 1955478..1955873 | - | 396 | WP_000252980.1 | MAPEG family protein | - |
| KZY04_RS09405 () | 1955926..1956273 | - | 348 | Protein_1848 | DUF72 domain-containing protein | - |
| KZY04_RS09410 () | 1956640..1957209 | - | 570 | WP_032316438.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| KZY04_RS09420 () | 1958522..1959202 | + | 681 | WP_038348741.1 | DUF2612 domain-containing protein | - |
| KZY04_RS09425 () | 1959202..1959726 | + | 525 | Protein_1852 | phage tail protein | - |
| KZY04_RS09430 () | 1960684..1962627 | - | 1944 | WP_219795159.1 | hypothetical protein | VF |
| KZY04_RS09435 () | 1962629..1963474 | - | 846 | WP_057916032.1 | glycosyltransferase family A protein | - |
| KZY04_RS09440 () | 1963697..1964359 | + | 663 | Protein_1855 | IS1 family transposase | - |
| KZY04_RS09445 () | 1964792..1965010 | + | 219 | Protein_1856 | hypothetical protein | - |
| KZY04_RS24180 () | 1965183..1965278 | - | 96 | Protein_1857 | hypothetical protein | - |
| KZY04_RS09450 () | 1965275..1965841 | - | 567 | WP_000891621.1 | hydrolase | - |
| KZY04_RS09455 () | 1966151..1967923 | + | 1773 | WP_001258678.1 | aspartate--tRNA ligase | - |
| KZY04_RS09460 () | 1968041..1968493 | + | 453 | WP_001300367.1 | dihydroneopterin triphosphate diphosphatase | - |
| KZY04_RS09465 () | 1968522..1969262 | + | 741 | WP_000907248.1 | putative transcriptional regulatory protein YebC | VF |
| KZY04_RS09470 () | 1969297..1969818 | + | 522 | WP_001295503.1 | crossover junction endodeoxyribonuclease RuvC | - |
| KZY04_RS09475 () | 1969820..1970422 | - | 603 | WP_001024904.1 | YebB family permuted papain-like enzyme | - |
| KZY04_RS09480 () | 1970493..1970558 | + | 66 | WP_072094247.1 | stress response small protein YobI | - |
| KZY04_RS09485 () | 1970697..1971308 | + | 612 | WP_000580327.1 | Holliday junction branch migration protein RuvA | - |
| KZY04_RS09490 () | 1971317..1972327 | + | 1011 | WP_000568519.1 | Holliday junction branch migration DNA helicase RuvB | - |
| KZY04_RS09495 () | 1972668..1973453 | - | 786 | WP_000571479.1 | High-affinity zinc uptake system membrane protein ZnuB | VF |
| KZY04_RS09500 () | 1973450..1974205 | - | 756 | WP_000202996.1 | Zinc import ATP-binding protein ZnuC | VF |
| KZY04_RS09505 () | 1974284..1975216 | + | 933 | WP_001342995.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| KZY04_RS09510 () | 1975232..1976554 | + | 1323 | WP_001184045.1 | murein DD-endopeptidase MepM | - |
| KZY04_RS09515 () | 1976674..1977645 | + | 972 | WP_000448381.1 | Lipid A biosynthesis myristoyltransferase | VF |
| KZY04_RS09520 () | 1977776..1979218 | - | 1443 | WP_000091148.1 | pyruvate kinase | - |
| KZY04_RS09525 () | 1979346..1980215 | - | 870 | WP_001056706.1 | DNA-binding transcriptional regulator HexR | - |
| KZY04_RS09530 () | 1980553..1982028 | + | 1476 | WP_000301720.1 | glucose-6-phosphate dehydrogenase | - |
| KZY04_RS09535 () | 1982263..1984074 | + | 1812 | WP_001069467.1 | phosphogluconate dehydratase | - |
| KZY04_RS09540 () | 1984111..1984752 | + | 642 | WP_021526358.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| KZY04_RS09545 () | 1984808..1985986 | - | 1179 | WP_219795160.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| KZY04_RS09550 () | 1986120..1986410 | + | 291 | WP_000257738.1 | DNA damage-inducible protein YebG | - |
| KZY04_RS09555 () | 1986477..1986833 | + | 357 | WP_001295500.1 | protein YebF | - |
| KZY04_RS09560 () | 1987160..1987819 | + | 660 | WP_219795161.1 | tellurite resistance TerB family protein | - |
| KZY04_RS09565 () | 1988028..1990088 | + | 2061 | WP_021526356.1 | oligopeptidase B | - |
| KZY04_RS09570 () | 1990085..1990747 | - | 663 | WP_000944256.1 | exodeoxyribonuclease X | - |
| KZY04_RS09575 () | 1990771..1991427 | - | 657 | WP_000011660.1 | carbon-nitrogen hydrolase family protein YobB | - |
| KZY04_RS09580 () | 1991529..1991759 | - | 231 | WP_000916763.1 | DNA polymerase III subunit theta | - |
| KZY04_RS09585 () | 1991898..1992272 | + | 375 | WP_000255065.1 | CopC domain-containing protein YobA | - |
| KZY04_RS09590 () | 1992276..1993148 | + | 873 | WP_000879298.1 | copper homeostasis membrane protein CopD | - |
| KZY04_RS09595 () | 1993161..1993502 | + | 342 | WP_000976472.1 | YebY family protein | - |
| - | 1993530..1993801 | - | 272 | - | - | Antitoxin Detail |
| - | 1993660..1993763 | + | 104 | - | - | Toxin Detail |
| KZY04_RS09600 () | 1993898..1994554 | + | 657 | WP_000812733.1 | protein-serine/threonine phosphatase | - |
| KZY04_RS09605 () | 1994555..1994746 | - | 192 | WP_001313035.1 | YebW family protein | - |
| KZY04_RS09610 () | 1994851..1995087 | - | 237 | WP_001295499.1 | YebV family protein | - |
| KZY04_RS09615 () | 1995205..1996644 | - | 1440 | WP_024176540.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| KZY04_RS09620 () | 1996724..1999357 | - | 2634 | WP_219795162.1 | hypothetical protein | VF |
| KZY04_RS09625 () | 1999326..2000609 | - | 1284 | WP_001207282.1 | membrane integrity lipid transport subunit YebS | - |
| KZY04_RS09630 () | 2000739..2001236 | + | 498 | WP_001043877.1 | L-methionine (R)-S-oxide reductase | - |
| KZY04_RS09635 () | 2001333..2002031 | + | 699 | WP_000431381.1 | RNA chaperone ProQ | - |
| KZY04_RS09640 () | 2002051..2004099 | + | 2049 | WP_001315679.1 | carboxy terminal-processing peptidase | - |
| KZY04_RS09645 () | 2004291..2005172 | + | 882 | WP_000984517.1 | protease HtpX | - |
| KZY04_RS09650 () | 2005218..2006591 | - | 1374 | WP_001127216.1 | MFS transporter | - |
| KZY04_RS09655 () | 2006768..2007559 | + | 792 | WP_001262182.1 | DNA-binding transcriptional regulator KdgR | - |
| KZY04_RS09660 () | 2007702..2007941 | - | 240 | WP_001619528.1 | YobH family protein | - |
| KZY04_RS09665 () | 2008100..2008243 | + | 144 | WP_000714550.1 | PhoP/PhoQ regulator MgrB | - |
| KZY04_RS09670 () | 2008318..2008605 | + | 288 | WP_001006866.1 | YebO family protein | - |
| KZY04_RS09675 () | 2009274..2009417 | + | 144 | WP_001295496.1 | DUF2627 domain-containing protein | - |
| KZY04_RS09680 () | 2009430..2009639 | + | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| KZY04_RS09685 () | 2009805..2010614 | + | 810 | WP_000010115.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| KZY04_RS09690 () | 2010611..2011177 | - | 567 | WP_001296134.1 | manganese efflux pump MntP | - |
| KZY04_RS09695 () | 2011606..2012064 | - | 459 | WP_000156255.1 | DUF986 family protein | - |
| KZY04_RS09700 () | 2012119..2012970 | - | 852 | WP_000228655.1 | PTS mannose transporter subunit IID | - |
| KZY04_RS09705 () | 2012983..2013783 | - | 801 | WP_000406926.1 | PTS mannose transporter subunit IIC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|