MGE detailed information
MGE type: Mobilizable plasmid MGE length: 66077 bp
Accession: NZ_CP079886 Location: 1..66077 Organism: Escherichia fergusonii strain 6S41-1 Replicon: plasmid p2-6S41-1
Accession: NZ_CP079886 Location: 1..66077 Organism: Escherichia fergusonii strain 6S41-1 Replicon: plasmid p2-6S41-1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KYC43_RS23760 (KYC43_23650) | 36..896 | + | 861 | WP_000557454.1 | SPBc2 prophage-derived aminoglycoside N(3')-acetyltransferase-like protein YokD | ARG |
| KYC43_RS23765 (KYC43_23655) | 909..1451 | + | 543 | WP_000587837.1 | AAA family ATPase | - |
| KYC43_RS23770 (KYC43_23660) | 1933..2124 | - | 192 | WP_000951934.1 | hypothetical protein | - |
| KYC43_RS23775 (KYC43_23665) | 2148..2375 | + | 228 | WP_000248278.1 | hypothetical protein | - |
| KYC43_RS23780 (KYC43_23670) | 2426..3553 | + | 1128 | WP_014837927.1 | DUF3883 domain-containing protein | - |
| KYC43_RS23785 (KYC43_23675) | 3590..4294 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| KYC43_RS23790 (KYC43_23680) | 4437..5570 | - | 1134 | WP_001089729.1 | permease | - |
| KYC43_RS23795 (KYC43_23685) | 5676..5999 | + | 324 | WP_001175593.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| KYC43_RS23800 (KYC43_23690) | 6101..6798 | + | 698 | WP_223367361.1 | IS1 family transposase | - |
| KYC43_RS23805 (KYC43_23695) | 7136..7219 | + | 84 | WP_000565612.1 | damage-inducible type I toxin DinQ | - |
| KYC43_RS23810 (KYC43_23700) | 7374..8018 | - | 645 | WP_000203396.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| KYC43_RS23815 (KYC43_23705) | 8223..8411 | + | 189 | WP_000957857.1 | hypothetical protein | - |
| KYC43_RS23820 (KYC43_23710) | 8421..9620 | + | 1200 | WP_000948429.1 | IS91 family transposase ISSbo1 | Transposase |
| KYC43_RS23825 (KYC43_23715) | 9793..10233 | - | 441 | Protein_13 | IS6 family transposase IS26 | Transposase |
| KYC43_RS23830 (KYC43_23720) | 10288..10386 | + | 99 | Protein_14 | IS200/IS605 family transposase | - |
| KYC43_RS23835 (KYC43_23725) | 10578..10772 | - | 195 | WP_053273080.1 | hypothetical protein | - |
| KYC43_RS23845 (KYC43_23735) | 11846..12127 | - | 282 | WP_000220560.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| KYC43_RS23850 (KYC43_23740) | 12117..12368 | - | 252 | WP_000121743.1 | plasmid stabilization protein | Antitoxin Detail |
| KYC43_RS23855 (KYC43_23745) | 13525..14361 | + | 837 | WP_001050931.1 | RepB family plasmid replication initiator protein | - |
| KYC43_RS23860 (KYC43_23750) | 14401..14847 | + | 447 | Protein_20 | hypothetical protein | - |
| KYC43_RS23865 (KYC43_23755) | 14984..15340 | + | 357 | WP_000456533.1 | DNA distortion polypeptide 3 | - |
| KYC43_RS23870 | 15337..15897 | - | 561 | WP_223672116.1 | hypothetical protein | - |
| KYC43_RS23875 | 15866..16315 | - | 450 | WP_223672117.1 | hypothetical protein | - |
| KYC43_RS23880 (KYC43_23765) | 16340..16621 | - | 282 | WP_001185482.1 | hypothetical protein | - |
| KYC43_RS23885 (KYC43_23770) | 16719..17381 | - | 663 | WP_000516402.1 | division plane positioning ATPase MipZ | - |
| KYC43_RS23890 (KYC43_23775) | 17848..19047 | - | 1200 | WP_000948429.1 | IS91 family transposase ISSbo1 | Transposase |
| KYC43_RS23895 (KYC43_23780) | 19057..19245 | - | 189 | WP_000957857.1 | hypothetical protein | - |
| KYC43_RS23900 (KYC43_23785) | 19337..19627 | + | 291 | WP_263300259.1 | IS6 family transposase IS26 | Transposase |
| KYC43_RS23905 (KYC43_23790) | 19633..19773 | + | 141 | WP_001044210.1 | hypothetical protein | - |
| KYC43_RS23910 (KYC43_23795) | 20259..20996 | + | 738 | WP_001446887.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| KYC43_RS23915 (KYC43_23800) | 20993..21217 | + | 225 | WP_000743213.1 | hypothetical protein | - |
| KYC43_RS23920 (KYC43_23805) | 21491..22705 | - | 1215 | WP_000214122.1 | Bicyclomycin resistance protein | ARG |
| KYC43_RS23925 | 22922..23806 | - | 885 | WP_001447541.1 | DUF3363 domain-containing protein | - |
| KYC43_RS23930 (KYC43_23815) | 23837..24667 | - | 831 | Protein_34 | IS91 family transposase ISVsa3 | Transposase |
| KYC43_RS23935 (KYC43_23820) | 24731..25435 | + | 705 | WP_001067784.1 | IS6 family transposase IS1006 | Transposase |
| KYC43_RS23940 (KYC43_23825) | 25520..25837 | - | 318 | WP_181382340.1 | hypothetical protein | - |
| KYC43_RS23945 (KYC43_23830) | 26174..27178 | - | 1005 | WP_000427623.1 | IS110 family transposase IS4321R | Transposase |
| KYC43_RS23950 (KYC43_23835) | 27257..29398 | - | 2142 | Protein_38 | Tn3 family transposase TnpA_TnAs3 | Transposase |
| KYC43_RS23955 (KYC43_23840) | 29461..30165 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| KYC43_RS23960 (KYC43_23845) | 30220..30363 | + | 144 | Protein_40 | peptidase M23 | - |
| KYC43_RS23965 (KYC43_23850) | 30437..30862 | + | 426 | WP_000422741.1 | IS66 family transposase ISEc23 | Transposase |
| KYC43_RS23970 (KYC43_23855) | 30859..31209 | + | 351 | WP_000624722.1 | IS66 family transposase ISEc23 | Transposase |
| KYC43_RS23975 (KYC43_23860) | 31240..32853 | + | 1614 | WP_000080195.1 | IS66 family transposase ISEc23 | Transposase |
| KYC43_RS23980 (KYC43_23865) | 32910..33152 | + | 243 | Protein_44 | peptidoglycan DD-metalloendopeptidase family protein | - |
| KYC43_RS23985 (KYC43_23870) | 33252..33449 | - | 198 | WP_000843496.1 | DUF2933 domain-containing protein | - |
| KYC43_RS23990 (KYC43_23875) | 33490..35967 | - | 2478 | WP_001398208.1 | Ag(+)-translocating P-type ATPase SilP | - |
| KYC43_RS23995 (KYC43_23880) | 36064..36504 | - | 441 | WP_000758221.1 | DUF411 domain-containing protein | - |
| KYC43_RS24000 (KYC43_23885) | 36591..39737 | - | 3147 | WP_000574035.1 | Cu(+)/Ag(+) efflux RND transporter permease subunit SilA | - |
| KYC43_RS24005 (KYC43_23890) | 39748..41040 | - | 1293 | WP_001398209.1 | Cu(+)/Ag(+) efflux RND transporter periplasmic adaptor subunit SilB | - |
| KYC43_RS24010 (KYC43_23895) | 41154..41507 | - | 354 | WP_001246155.1 | cation efflux system protein CusF | - |
| KYC43_RS24015 (KYC43_23900) | 41535..42920 | - | 1386 | WP_000475512.1 | Cation efflux system protein CusC | VF |
| KYC43_RS24020 (KYC43_23905) | 43110..43790 | + | 681 | WP_000697969.1 | Transcriptional regulatory protein CusR | VF |
| KYC43_RS24025 (KYC43_23910) | 43783..45258 | + | 1476 | WP_000555737.1 | copper/silver sensor histidine kinase SilS | - |
| KYC43_RS24030 (KYC43_23915) | 45509..45940 | + | 432 | WP_000790483.1 | silver-binding protein SilE | - |
| KYC43_RS24035 (KYC43_23920) | 46084..46434 | + | 351 | WP_000694953.1 | DUF305 domain-containing protein | - |
| KYC43_RS24040 (KYC43_23925) | 46822..47730 | - | 909 | Protein_56 | HNH endonuclease | - |
| KYC43_RS24045 (KYC43_23930) | 48367..49341 | + | 975 | WP_001148756.1 | sensor domain-containing diguanylate cyclase | - |
| KYC43_RS24050 (KYC43_23935) | 49909..50259 | + | 351 | WP_000493378.1 | hypothetical protein | - |
| KYC43_RS24055 (KYC43_23940) | 50310..51053 | + | 744 | WP_000129823.1 | hypothetical protein | - |
| KYC43_RS24060 (KYC43_23945) | 51050..51826 | + | 777 | WP_000015958.1 | site-specific integrase | - |
| KYC43_RS24065 (KYC43_23950) | 51884..52141 | - | 258 | WP_000764642.1 | hypothetical protein | - |
| KYC43_RS24070 (KYC43_23955) | 52270..52374 | - | 105 | WP_032409716.1 | hypothetical protein | - |
| KYC43_RS24075 (KYC43_23960) | 52904..53770 | + | 867 | WP_004118283.1 | replication initiation protein | - |
| KYC43_RS24080 (KYC43_23965) | 53947..54216 | - | 270 | WP_000339857.1 | hypothetical protein | - |
| KYC43_RS24085 (KYC43_23970) | 54631..55836 | + | 1206 | WP_000368714.1 | AAA family ATPase | - |
| KYC43_RS24090 (KYC43_23975) | 55836..56810 | + | 975 | WP_000064119.1 | ParB family protein | - |
| KYC43_RS24095 (KYC43_23980) | 56892..58163 | - | 1272 | WP_047671986.1 | Y-family DNA polymerase | - |
| KYC43_RS24100 (KYC43_23985) | 58163..58594 | - | 432 | WP_000776034.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| KYC43_RS24105 (KYC43_23990) | 59000..60487 | + | 1488 | Protein_69 | group II intron reverse transcriptase/maturase | - |
| KYC43_RS24110 (KYC43_23995) | 60639..61336 | + | 698 | WP_223229472.1 | IS1-like element IS1X3 family transposase | - |
| KYC43_RS24115 (KYC43_24000) | 61346..61654 | + | 309 | Protein_71 | replication initiation protein | - |
| KYC43_RS24120 (KYC43_24005) | 62539..63507 | + | 969 | WP_030005799.1 | IS5 family transposase IS903B | Transposase |
| KYC43_RS24125 (KYC43_24010) | 63647..64033 | - | 387 | WP_001039464.1 | plasmid stabilization protein StbA | - |
| KYC43_RS24130 (KYC43_24015) | 64715..66077 | - | 1363 | Protein_74 | Tn3 family transposase TnpA_TnAs1 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|