MGE detailed information
MGE type: Conjugative plasmid MGE length: 136082 bp
Accession: NZ_CP078136 Location: 1..136082 Organism: Escherichia coli strain Sx181-0-1 Replicon: plasmid unnamed1
Accession: NZ_CP078136 Location: 1..136082 Organism: Escherichia coli strain Sx181-0-1 Replicon: plasmid unnamed1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KW063_RS00005 (166) | 166..462 | + | 297 | WP_001272245.1 | hypothetical protein | - |
| KW063_RS00010 (573) | 573..1394 | + | 822 | WP_001491574.1 | DUF932 domain-containing protein | - |
| KW063_RS00015 (1691) | 1691..2293 | - | 603 | WP_218335130.1 | transglycosylase SLT domain-containing protein | - |
| KW063_RS00020 (2633) | 2633..3016 | + | 384 | WP_001063021.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| KW063_RS00025 (3207) | 3207..3854 | + | 648 | WP_218335132.1 | conjugal transfer transcriptional regulator TraJ | - |
| KW063_RS00030 (3990) | 3990..4205 | + | 216 | WP_071782156.1 | conjugal transfer relaxosome protein TraY | - |
| KW063_RS00035 (4249) | 4249..4614 | + | 366 | WP_000340270.1 | type IV conjugative transfer system pilin TraA | - |
| KW063_RS00040 (4629) | 4629..4940 | + | 312 | WP_000012108.1 | type IV conjugative transfer system protein TraL | - |
| KW063_RS00045 (4962) | 4962..5528 | + | 567 | WP_000399792.1 | type IV conjugative transfer system protein TraE | - |
| KW063_RS00050 (5515) | 5515..6243 | + | 729 | WP_001712324.1 | type-F conjugative transfer system secretin TraK | - |
| KW063_RS00055 (6243) | 6243..7670 | + | 1428 | WP_087905768.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| KW063_RS00060 (7660) | 7660..8247 | + | 588 | WP_087905767.1 | conjugal transfer pilus-stabilizing protein TraP | - |
| KW063_RS00065 (8234) | 8234..8551 | + | 318 | WP_232795998.1 | conjugal transfer protein TrbD | - |
| KW063_RS00070 (8551) | 8551..9066 | + | 516 | WP_087905765.1 | type IV conjugative transfer system lipoprotein TraV | - |
| KW063_RS00075 (9201) | 9201..9422 | + | 222 | WP_218335136.1 | conjugal transfer protein TraR | - |
| KW063_RS00080 (9583) | 9583..12210 | + | 2628 | WP_087905763.1 | type IV secretion system protein TraC | - |
| KW063_RS00085 (12207) | 12207..12593 | + | 387 | WP_000214098.1 | type-F conjugative transfer system protein TrbI | - |
| KW063_RS00090 (12590) | 12590..13222 | + | 633 | WP_087905762.1 | type-F conjugative transfer system protein TraW | - |
| KW063_RS00095 (13219) | 13219..14211 | + | 993 | WP_218335138.1 | conjugal transfer pilus assembly protein TraU | - |
| KW063_RS00100 (14240) | 14240..14575 | + | 336 | WP_087905760.1 | hypothetical protein | - |
| KW063_RS00105 (14568) | 14568..15020 | + | 453 | WP_087905759.1 | hypothetical protein | - |
| KW063_RS00110 (15048) | 15048..15686 | + | 639 | WP_218335140.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| KW063_RS00115 (15683) | 15683..17491 | + | 1809 | WP_087905757.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| KW063_RS00120 (17518) | 17518..17775 | + | 258 | WP_140410869.1 | conjugal transfer protein TrbE | - |
| KW063_RS00125 (17768) | 17768..18511 | + | 744 | WP_140410867.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| KW063_RS00130 (18525) | 18525..18866 | + | 342 | WP_023181031.1 | conjugal transfer protein TrbA | - |
| KW063_RS00135 (19264) | 19264..19548 | + | 285 | WP_218335142.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| KW063_RS00140 (19535) | 19535..20080 | + | 546 | WP_087905752.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| KW063_RS00145 (20070) | 20070..20351 | + | 282 | WP_232795997.1 | P-type conjugative transfer protein TrbJ | - |
| KW063_RS00150 (20338) | 20338..20730 | + | 393 | WP_232795996.1 | F-type conjugal transfer protein TrbF | - |
| KW063_RS00155 (20717) | 20717..22090 | + | 1374 | WP_218335146.1 | conjugal transfer pilus assembly protein TraH | - |
| KW063_RS00160 (22087) | 22087..24933 | + | 2847 | WP_218335149.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| KW063_RS00165 (24930) | 24930..25439 | + | 510 | WP_218335151.1 | conjugal transfer entry exclusion protein TraS | - |
| KW063_RS00170 (25606) | 25606..25839 | + | 234 | Protein_34 | complement resistance protein TraT | - |
| KW063_RS00175 (26064) | 26064..28217 | + | 2154 | WP_218335153.1 | type IV conjugative transfer system coupling protein TraD | - |
| KW063_RS00180 (28226) | 28226..28624 | - | 399 | WP_218335155.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| KW063_RS00185 (28624) | 28624..28851 | - | 228 | WP_000450532.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| KW063_RS00190 (28933) | 28933..34203 | + | 5271 | WP_218335157.1 | conjugative transfer relaxase/helicase TraI | - |
| KW063_RS00195 (34223) | 34223..34969 | + | 747 | WP_218335158.1 | conjugal transfer pilus acetylase TraX | - |
| KW063_RS00200 (35028) | 35028..35888 | + | 861 | WP_097493262.1 | alpha/beta hydrolase | - |
| KW063_RS00205 (35991) | 35991..36551 | + | 561 | WP_097433445.1 | fertility inhibition protein FinO | - |
| KW063_RS00210 (36681) | 36681..36893 | + | 213 | WP_096152115.1 | hypothetical protein | - |
| KW063_RS00215 (37138) | 37138..37227 | + | 90 | Protein_43 | endonuclease | - |
| - (37468) | 37468..37527 | - | 60 | NuclAT_0 | - | - |
| - (37468) | 37468..37527 | - | 60 | NuclAT_0 | - | - |
| - (37468) | 37468..37527 | - | 60 | NuclAT_0 | - | - |
| - (37468) | 37468..37527 | - | 60 | NuclAT_0 | - | - |
| KW063_RS00225 (37813) | 37813..38850 | + | 1038 | WP_218335160.1 | IS630-like element ISEc40 family transposase | - |
| KW063_RS00230 (39118) | 39118..39420 | + | 303 | WP_001346256.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| KW063_RS00235 (39411) | 39411..39893 | + | 483 | WP_000405252.1 | GNAT family N-acetyltransferase | Toxin Detail |
| KW063_RS00240 (40196) | 40196..40450 | + | 255 | WP_000083846.1 | replication regulatory protein RepA | - |
| KW063_RS00245 (40557) | 40557..40754 | + | 198 | WP_218335163.1 | protein CopA/IncA | - |
| KW063_RS00250 (40732) | 40732..41394 | + | 663 | Protein_49 | plasmid replication initiator RepA | - |
| KW063_RS00255 (42403) | 42403..43161 | - | 759 | WP_087905389.1 | substrate-binding domain-containing protein | - |
| KW063_RS00260 (43454) | 43454..43944 | + | 491 | Protein_51 | ATP-binding protein | - |
| KW063_RS00265 (44152) | 44152..44418 | - | 267 | Protein_52 | IS66 family insertion sequence element accessory protein TnpB | - |
| KW063_RS00275 (44884) | 44884..45111 | - | 228 | WP_218335167.1 | hypothetical protein | - |
| KW063_RS00280 (45177) | 45177..46277 | - | 1101 | Protein_54 | IS66 family transposase | - |
| KW063_RS00285 (46769) | 46769..48163 | - | 1395 | WP_218335169.1 | carbohydrate porin | - |
| KW063_RS00290 (48402) | 48402..49343 | - | 942 | WP_218335171.1 | aminoimidazole riboside kinase | - |
| KW063_RS00295 (49437) | 49437..50870 | - | 1434 | WP_213667406.1 | glycoside hydrolase family 32 protein | - |
| KW063_RS00300 (50867) | 50867..52144 | - | 1278 | WP_187193326.1 | MFS transporter | - |
| KW063_RS00305 (52207) | 52207..54333 | - | 2127 | WP_218335174.1 | alpha-galactosidase | - |
| KW063_RS00310 (54427) | 54427..55437 | - | 1011 | WP_137469807.1 | substrate-binding domain-containing protein | - |
| KW063_RS00315 (55634) | 55634..56862 | + | 1229 | WP_088895425.1 | IS3-like element IS2 family transposase | - |
| KW063_RS00320 (57329) | 57329..57607 | + | 279 | WP_218335198.1 | adhesin biosynthesis transcription regulatory family protein | - |
| KW063_RS00325 (57634) | 57634..58176 | + | 543 | WP_218335176.1 | fimbrial protein | - |
| KW063_RS00330 (58185) | 58185..60623 | + | 2439 | WP_218335178.1 | F4 (K88) fimbrial usher FaeD | - |
| KW063_RS00335 (60616) | 60616..61434 | + | 819 | WP_218335180.1 | fimbria/pilus periplasmic chaperone | - |
| KW063_RS00340 (61469) | 61469..61960 | + | 492 | WP_218335183.1 | F4 (K88) fimbria minor subunit FaeF | - |
| KW063_RS00345 (62208) | 62208..63011 | + | 804 | WP_218335185.1 | hypothetical protein | - |
| KW063_RS00350 (63230) | 63230..64027 | + | 798 | WP_218335200.1 | F4 (K88) fimbria minor subunit FaeH | - |
| KW063_RS00355 (64058) | 64058..64822 | + | 765 | WP_218335187.1 | F4 (K88) fimbria minor subunit FaeI | - |
| KW063_RS00360 (64839) | 64839..65612 | + | 774 | WP_218335189.1 | F4 (K88) fimbria accessory protein FaeJ | - |
| KW063_RS23635 (65612) | 65612..65737 | + | 126 | WP_256351378.1 | hypothetical protein | - |
| KW063_RS00365 (65689) | 65689..66330 | + | 642 | WP_097430227.1 | hypothetical protein | - |
| KW063_RS00370 (66320) | 66320..67078 | + | 759 | WP_218335119.1 | EAL domain-containing protein | - |
| KW063_RS00375 (67260) | 67260..67502 | + | 243 | WP_218335192.1 | hypothetical protein | - |
| KW063_RS00380 (67566) | 67566..68315 | + | 750 | Protein_75 | SDR family oxidoreductase | - |
| KW063_RS00385 (68461) | 68461..69693 | + | 1233 | WP_218335080.1 | phosphoadenosine phosphosulfate reductase | - |
| KW063_RS00390 (69678) | 69678..70331 | + | 654 | WP_218335082.1 | ParB N-terminal domain-containing protein | - |
| KW063_RS00395 (70582) | 70582..70965 | + | 384 | WP_218335084.1 | hypothetical protein | - |
| KW063_RS00400 (71145) | 71145..71792 | + | 648 | WP_218335086.1 | IS66-like element accessory protein TnpA | - |
| KW063_RS00405 (71792) | 71792..72139 | + | 348 | WP_000624622.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| KW063_RS00410 (72159) | 72159..73521 | + | 1363 | Protein_81 | IS66 family transposase | - |
| KW063_RS00415 (74463) | 74463..75119 | + | 657 | WP_218335088.1 | DsbA family protein | - |
| KW063_RS00420 (75283) | 75283..76056 | + | 774 | Protein_83 | IS66 family transposase | - |
| KW063_RS00425 (76230) | 76230..76434 | - | 205 | Protein_84 | DUF1187 family protein | - |
| KW063_RS00430 (76944) | 76944..77232 | + | 289 | Protein_85 | ribbon-helix-helix protein, CopG family | - |
| KW063_RS00435 (77907) | 77907..78719 | + | 813 | WP_218335090.1 | helix-turn-helix domain-containing protein | - |
| KW063_RS00440 (78835) | 78835..79944 | - | 1110 | WP_218335092.1 | porin OmpC | - |
| KW063_RS00445 (81053) | 81053..81805 | - | 753 | Protein_88 | IS3 family transposase | - |
| KW063_RS00455 (83175) | 83175..83600 | - | 426 | Protein_90 | transposase | - |
| KW063_RS00460 (83813) | 83813..84528 | + | 716 | Protein_91 | IS1 family transposase | - |
| KW063_RS00465 (84525) | 84525..84827 | - | 303 | WP_218335094.1 | hypothetical protein | - |
| KW063_RS23640 (85033) | 85033..85190 | - | 158 | Protein_93 | IS4 family transposase | - |
| KW063_RS23645 (86764) | 86764..87120 | - | 357 | Protein_94 | ISNCY family transposase | - |
| KW063_RS00475 (87122) | 87122..87435 | + | 314 | Protein_95 | ATP-binding protein | - |
| KW063_RS00480 (87505) | 87505..89124 | - | 1620 | WP_218335098.1 | ISL3 family transposase | - |
| KW063_RS00485 (89217) | 89217..89687 | - | 471 | Protein_97 | ISNCY family transposase | - |
| KW063_RS00490 (89863) | 89863..90036 | - | 174 | WP_170983786.1 | hypothetical protein | - |
| KW063_RS00495 (91877) | 91877..92029 | - | 153 | WP_157918472.1 | hypothetical protein | - |
| KW063_RS00500 (92080) | 92080..93426 | - | 1347 | WP_218335202.1 | ISNCY family transposase | - |
| KW063_RS00505 (93601) | 93601..94998 | - | 1398 | WP_089644703.1 | ISNCY family transposase | - |
| KW063_RS23650 (95402) | 95402..95506 | - | 105 | Protein_102 | transposase | - |
| KW063_RS00515 (96007) | 96007..96621 | + | 615 | WP_218335100.1 | alpha/beta hydrolase | - |
| KW063_RS00520 (97065) | 97065..97889 | - | 825 | WP_218335102.1 | A24 family peptidase | - |
| KW063_RS00525 (97892) | 97892..99004 | - | 1113 | WP_218335104.1 | pilus biosynthesis protein | - |
| KW063_RS00530 (99019) | 99019..100044 | - | 1026 | WP_087905894.1 | type II secretion system F family protein | - |
| KW063_RS00535 (100031) | 100031..101362 | - | 1332 | WP_122653655.1 | ATPase, T2SS/T4P/T4SS family | - |
| KW063_RS00540 (101560) | 101560..102048 | - | 489 | WP_087905896.1 | lngG | - |
| KW063_RS00545 (102036) | 102036..102863 | - | 828 | WP_087905897.1 | pilus assembly protein | - |
| KW063_RS00550 (102865) | 102865..103425 | - | 561 | WP_097430216.1 | pilus assembly protein | - |
| KW063_RS00555 (103428) | 103428..104885 | - | 1458 | WP_218335106.1 | type II and III secretion system protein | - |
| KW063_RS00560 (104901) | 104901..105320 | - | 420 | WP_087905900.1 | TcpQ domain-containing protein | - |
| KW063_RS00565 (105339) | 105339..106901 | - | 1563 | WP_218335109.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | - |
| KW063_RS00570 (106962) | 106962..107669 | - | 708 | WP_218335111.1 | type IV pilus major pilin | - |
| KW063_RS00575 (107973) | 107973..108416 | - | 444 | WP_187179316.1 | lytic transglycosylase domain-containing protein | - |
| KW063_RS00580 (108424) | 108424..109266 | - | 843 | WP_089644598.1 | transcriptional regulator HilD | - |
| KW063_RS00585 (109541) | 109541..109789 | - | 249 | WP_232796008.1 | adhesin biosynthesis transcription regulatory family protein | - |
| KW063_RS00590 (110335) | 110335..110463 | + | 129 | Protein_118 | serine/threonine protein kinase | - |
| KW063_RS00595 (110584) | 110584..111324 | + | 741 | WP_087905906.1 | tyrosine-type recombinase/integrase | - |
| KW063_RS00600 (111609) | 111609..112586 | - | 978 | WP_034173277.1 | RepB family plasmid replication initiator protein | - |
| KW063_RS00605 (113184) | 113184..114235 | - | 1052 | Protein_121 | IS3 family transposase | - |
| KW063_RS23655 (114200) | 114200..114510 | + | 311 | Protein_122 | hypothetical protein | - |
| KW063_RS00610 (114599) | 114599..114817 | - | 219 | WP_232796006.1 | hypothetical protein | - |
| KW063_RS00615 (114902) | 114902..115162 | - | 261 | WP_089633444.1 | hypothetical protein | - |
| KW063_RS00620 (115176) | 115176..115463 | - | 288 | WP_087905911.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| KW063_RS00625 (115460) | 115460..115711 | - | 252 | WP_187187660.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| KW063_RS00630 (115969) | 115969..116181 | - | 213 | WP_087905913.1 | hypothetical protein | - |
| KW063_RS00635 (116284) | 116284..116649 | - | 366 | WP_218335115.1 | transposase | - |
| KW063_RS00640 (116828) | 116828..117138 | - | 311 | Protein_129 | transposase | - |
| KW063_RS00645 (117386) | 117386..121252 | - | 3867 | WP_218335117.1 | S6 family peptidase | - |
| KW063_RS00650 (122211) | 122211..122569 | + | 359 | Protein_131 | fimbrial protein | - |
| KW063_RS00655 (122694) | 122694..123335 | + | 642 | WP_097430227.1 | hypothetical protein | - |
| KW063_RS00660 (123325) | 123325..124083 | + | 759 | WP_218335119.1 | EAL domain-containing protein | - |
| KW063_RS00665 (124574) | 124574..125017 | + | 444 | WP_232796005.1 | hypothetical protein | - |
| KW063_RS00670 (125415) | 125415..126562 | - | 1148 | Protein_135 | IS3 family transposase | - |
| KW063_RS00675 (126630) | 126630..126701 | + | 72 | Protein_136 | plasmid maintenance protein CcdB | - |
| KW063_RS00680 (126926) | 126926..128092 | + | 1167 | WP_087905634.1 | plasmid-partitioning protein SopA | - |
| KW063_RS00685 (128092) | 128092..129063 | + | 972 | WP_087905635.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| KW063_RS23660 (129504) | 129504..129697 | + | 194 | Protein_139 | hypothetical protein | - |
| KW063_RS00690 (129800) | 129800..130990 | + | 1191 | Protein_140 | IS4 family transposase | - |
| KW063_RS00695 (131415) | 131415..131840 | + | 426 | Protein_141 | antirestriction protein | - |
| KW063_RS00700 (131887) | 131887..132306 | + | 420 | WP_218335121.1 | DUF1380 domain-containing protein | - |
| KW063_RS00705 (132306) | 132306..132497 | + | 192 | WP_218335123.1 | hypothetical protein | - |
| KW063_RS00715 (133477) | 133477..133707 | + | 231 | WP_000218637.1 | hypothetical protein | - |
| KW063_RS00720 (133759) | 133759..135120 | + | 1362 | WP_218335126.1 | DUF3560 domain-containing protein | - |
| KW063_RS00725 (135167) | 135167..135730 | + | 564 | WP_218335128.1 | class I SAM-dependent methyltransferase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|