MGE detailed information
MGE type: Genomic_island MGE length: 21260 bp
Accession: NZ_CP076723 Location: 4318848..4340107 Organism: Geomonas oryzisoli strain RG10 Replicon: chromosome
Accession: NZ_CP076723 Location: 4318848..4340107 Organism: Geomonas oryzisoli strain RG10 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KP004_RS18720 (KP004_18720) | 4314157..4314894 | - | 738 | WP_216799918.1 | LytTR family DNA-binding domain-containing protein | - |
| KP004_RS18725 (KP004_18725) | 4314898..4315293 | - | 396 | WP_216799919.1 | type II toxin-antitoxin system VapC family toxin | - |
| KP004_RS18730 (KP004_18730) | 4315280..4315519 | - | 240 | WP_216799920.1 | type II toxin-antitoxin system prevent-host-death family antitoxin | - |
| KP004_RS18735 (KP004_18735) | 4315830..4318142 | + | 2313 | WP_216799921.1 | hypothetical protein | - |
| KP004_RS18740 (KP004_18740) | 4318326..4318811 | - | 486 | WP_216799922.1 | VOC family protein | - |
| KP004_RS18745 (KP004_18745) | 4318848..4319162 | - | 315 | WP_199390330.1 | HigA family addiction module antitoxin | Antitoxin Detail |
| KP004_RS18750 (KP004_18750) | 4319171..4319452 | - | 282 | WP_199390331.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| KP004_RS18755 (KP004_18755) | 4319602..4320867 | - | 1266 | WP_216799923.1 | hypothetical protein | - |
| KP004_RS18760 (KP004_18760) | 4321360..4321911 | - | 552 | WP_216799924.1 | chalcone isomerase family protein | - |
| KP004_RS18765 (KP004_18765) | 4322204..4322497 | + | 294 | WP_216799925.1 | hypothetical protein | - |
| KP004_RS18770 (KP004_18770) | 4322506..4322808 | + | 303 | WP_216799926.1 | hypothetical protein | - |
| KP004_RS18775 (KP004_18775) | 4323085..4323261 | + | 177 | WP_216799927.1 | hypothetical protein | - |
| KP004_RS18780 (KP004_18780) | 4323794..4325290 | - | 1497 | WP_216799928.1 | hypothetical protein | - |
| KP004_RS18785 (KP004_18785) | 4326464..4326793 | - | 330 | WP_216799929.1 | hypothetical protein | - |
| KP004_RS18790 (KP004_18790) | 4326901..4327905 | - | 1005 | WP_216799930.1 | transposase | - |
| KP004_RS18795 (KP004_18795) | 4328206..4328754 | - | 549 | WP_216799931.1 | hypothetical protein | - |
| KP004_RS18800 (KP004_18800) | 4328784..4329281 | - | 498 | WP_216799932.1 | hypothetical protein | - |
| KP004_RS18805 (KP004_18805) | 4329312..4330313 | - | 1002 | WP_239026861.1 | transposase | - |
| KP004_RS18810 (KP004_18810) | 4330345..4330698 | - | 354 | WP_216799933.1 | transposase | - |
| KP004_RS18815 (KP004_18815) | 4330773..4331096 | - | 324 | Protein_3701 | transposase | - |
| KP004_RS18820 (KP004_18820) | 4331252..4333936 | - | 2685 | WP_216799934.1 | hypothetical protein | - |
| KP004_RS18825 (KP004_18825) | 4333961..4334638 | - | 678 | WP_216799935.1 | restriction endonuclease | - |
| KP004_RS18830 (KP004_18830) | 4335545..4336195 | - | 651 | WP_216799936.1 | fibronectin type III domain-containing protein | - |
| KP004_RS18835 (KP004_18835) | 4336562..4336864 | + | 303 | WP_216799937.1 | helix-turn-helix domain-containing protein | - |
| KP004_RS18840 (KP004_18840) | 4336988..4337272 | + | 285 | WP_216799938.1 | DUF2442 domain-containing protein | - |
| KP004_RS18845 (KP004_18845) | 4337393..4337722 | - | 330 | WP_216799939.1 | type II toxin-antitoxin system PemK/MazF family toxin | Toxin Detail |
| KP004_RS18850 (KP004_18850) | 4337719..4337925 | - | 207 | WP_216799940.1 | antitoxin MazE family protein | Antitoxin Detail |
| KP004_RS18855 (KP004_18855) | 4337981..4338517 | - | 537 | WP_216799941.1 | hypothetical protein | - |
| KP004_RS18860 (KP004_18860) | 4339127..4340107 | - | 981 | WP_216799942.1 | hypothetical protein | - |
| KP004_RS18865 (KP004_18865) | 4340441..4341895 | - | 1455 | WP_216799943.1 | NADH-quinone oxidoreductase subunit N | - |
| KP004_RS18870 (KP004_18870) | 4341927..4343606 | - | 1680 | WP_216799944.1 | NADH-quinone oxidoreductase subunit M | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|