MGE detailed information
MGE type: Prophage MGE length: 50930 bp
Accession: NZ_CP076230 Location: 2614813..2665742 Organism: Escherichia coli O157:H7 strain Rafaela_II Replicon: chromosome
Accession: NZ_CP076230 Location: 2614813..2665742 Organism: Escherichia coli O157:H7 strain Rafaela_II Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| XF37_RS13325 (2611062) | 2611062..2613488 | - | 2427 | WP_000041704.1 | DmsA/YnfE/YnfF family dimethyl sulfoxide reductase | - |
| XF37_RS13330 (2613687) | 2613687..2613992 | - | 306 | WP_000778147.1 | DUF1161 domain-containing protein | - |
| XF37_RS13335 (2614100) | 2614100..2614810 | + | 711 | WP_001303515.1 | YnfC family lipoprotein | - |
| XF37_RS13340 (2614813) | 2614813..2615373 | - | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| XF37_RS13345 (2615408) | 2615408..2615749 | - | 342 | WP_000705189.1 | DUF1283 family protein | - |
| XF37_RS13350 (2615884) | 2615884..2616210 | + | 327 | WP_001302046.1 | YnfA family protein | - |
| XF37_RS13355 (2616416) | 2616416..2616502 | + | 87 | Protein_2611 | hypothetical protein | - |
| XF37_RS13360 (2616482) | 2616482..2617164 | - | 683 | Protein_2612 | DUF3596 domain-containing protein | - |
| XF37_RS13365 (2617199) | 2617199..2617450 | - | 252 | WP_000005552.1 | excisionase family protein | - |
| XF37_RS13370 (2617523) | 2617523..2619994 | - | 2472 | WP_000048458.1 | exonuclease | - |
| XF37_RS13375 (2620087) | 2620087..2620278 | - | 192 | WP_001090200.1 | DUF1482 family protein | - |
| XF37_RS13380 (2620275) | 2620275..2620463 | - | 189 | WP_000449192.1 | cell division inhibition protein DicB | - |
| XF37_RS13385 (2621032) | 2621032..2621250 | - | 219 | WP_001171930.1 | protein YdfC | - |
| XF37_RS13390 (2621322) | 2621322..2621621 | - | 300 | WP_001240334.1 | hypothetical protein | - |
| XF37_RS13395 (2621973) | 2621973..2622251 | - | 279 | WP_001303511.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| XF37_RS13400 (2622253) | 2622253..2622444 | - | 192 | WP_001302048.1 | hypothetical protein | Antitoxin Detail |
| XF37_RS13405 (2622465) | 2622465..2622836 | - | 372 | WP_001169686.1 | hypothetical protein | - |
| XF37_RS13410 (2622934) | 2622934..2623005 | + | 72 | Protein_2622 | hypothetical protein | - |
| XF37_RS13415 (2623058) | 2623058..2624271 | + | 1214 | WP_162829202.1 | IS3 family transposase IS1203 | Transposase |
| XF37_RS13420 (2624316) | 2624316..2624549 | + | 234 | Protein_2624 | transcriptional regulator | - |
| XF37_RS13425 (2624546) | 2624546..2624971 | + | 426 | WP_000693943.1 | toxin YdaT family protein | - |
| XF37_RS13430 (2624994) | 2624994..2625956 | + | 963 | WP_000095669.1 | helix-turn-helix domain-containing protein | - |
| XF37_RS13435 (2625963) | 2625963..2626703 | + | 741 | WP_000788939.1 | ATP-binding protein | - |
| XF37_RS13440 (2626729) | 2626729..2627498 | + | 770 | Protein_2628 | DUF1627 domain-containing protein | - |
| XF37_RS13445 (2627514) | 2627514..2627909 | + | 396 | WP_001118159.1 | DUF977 family protein | - |
| XF37_RS13450 (2627966) | 2627966..2628550 | + | 585 | WP_000206793.1 | DUF551 domain-containing protein | - |
| XF37_RS13455 (2628666) | 2628666..2628770 | + | 105 | WP_001278450.1 | hypothetical protein | - |
| XF37_RS13460 (2629016) | 2629016..2629171 | + | 156 | WP_001303917.1 | type I toxin-antitoxin system toxin HokD | - |
| XF37_RS13465 (2629339) | 2629339..2629617 | + | 279 | WP_012779366.1 | hypothetical protein | - |
| XF37_RS13470 (2629619) | 2629619..2630668 | + | 1050 | WP_001265161.1 | DUF968 domain-containing protein | - |
| XF37_RS13475 (2630681) | 2630681..2631040 | + | 360 | WP_001217455.1 | RusA family crossover junction endodeoxyribonuclease | - |
| XF37_RS13480 (2631037) | 2631037..2631726 | + | 690 | WP_001059381.1 | bacteriophage antitermination protein Q | - |
| XF37_RS13500 (2632362) | 2632362..2632790 | + | 429 | WP_001303509.1 | tellurite resistance protein | - |
| XF37_RS13505 (2632787) | 2632787..2632954 | + | 168 | WP_000216653.1 | DUF3927 family protein | - |
| XF37_RS13510 (2633149) | 2633149..2633292 | - | 144 | Protein_2639 | hypothetical protein | - |
| XF37_RS13515 (2633269) | 2633269..2635119 | + | 1851 | WP_000023202.1 | SASA family carbohydrate esterase | - |
| XF37_RS13520 (2635559) | 2635559..2635774 | + | 216 | WP_024180155.1 | class II holin family protein | - |
| XF37_RS13525 (2635779) | 2635779..2636123 | + | 345 | WP_000731241.1 | YdfR family protein | - |
| XF37_RS13530 (2636174) | 2636174..2636707 | + | 534 | WP_000992137.1 | lysozyme | - |
| XF37_RS13535 (2636978) | 2636978..2637547 | + | 570 | WP_001056806.1 | phage antirepressor N-terminal domain-containing protein | - |
| XF37_RS13540 (2637547) | 2637547..2637693 | + | 147 | WP_000539792.1 | hypothetical protein | - |
| XF37_RS13550 (2637921) | 2637921..2638106 | + | 186 | WP_012816791.1 | Rz1 family lipoprotein | - |
| XF37_RS13555 (2638531) | 2638531..2638758 | - | 228 | WP_000095736.1 | YlcI/YnfO family protein | - |
| XF37_RS13560 (2638800) | 2638800..2639165 | + | 366 | WP_000279796.1 | HNH endonuclease | - |
| XF37_RS13565 (2639457) | 2639457..2640020 | + | 564 | WP_000958360.1 | terminase small subunit | - |
| XF37_RS13570 (2640017) | 2640017..2641678 | + | 1662 | WP_001301491.1 | terminase large subunit | - |
| XF37_RS13575 (2641742) | 2641742..2643679 | + | 1938 | WP_000173030.1 | phage major capsid protein | - |
| XF37_RS13580 (2643724) | 2643724..2643945 | + | 222 | WP_001063099.1 | hypothetical protein | - |
| XF37_RS13585 (2643891) | 2643891..2646470 | + | 2580 | WP_226209119.1 | phage portal protein | - |
| XF37_RS13590 (2646473) | 2646473..2646799 | + | 327 | WP_000125988.1 | head-tail connector protein | - |
| XF37_RS13595 (2646809) | 2646809..2647159 | + | 351 | WP_001007905.1 | phage head closure protein | - |
| XF37_RS13600 (2647156) | 2647156..2647602 | + | 447 | WP_000573391.1 | HK97 gp10 family phage protein | - |
| XF37_RS13605 (2647599) | 2647599..2647943 | + | 345 | WP_000133388.1 | DUF3168 domain-containing protein | - |
| XF37_RS13610 (2648009) | 2648009..2648725 | + | 717 | WP_062876526.1 | major tail subunit | - |
| XF37_RS13615 (2648740) | 2648740..2649114 | + | 375 | WP_000710952.1 | phage tail assembly chaperone | - |
| XF37_RS13620 (2649210) | 2649210..2649419 | + | 210 | WP_001453746.1 | DUF4035 domain-containing protein | - |
| XF37_RS13625 (2649467) | 2649467..2652709 | + | 3243 | WP_000212818.1 | phage tail tape measure protein | - |
| XF37_RS13630 (2652702) | 2652702..2653043 | + | 342 | WP_000807954.1 | phage tail protein | - |
| XF37_RS13635 (2653043) | 2653043..2653741 | + | 699 | WP_001303180.1 | phage minor tail protein L | - |
| XF37_RS13640 (2653752) | 2653752..2654495 | + | 744 | WP_000194720.1 | C40 family peptidase | - |
| XF37_RS13645 (2654492) | 2654492..2655073 | + | 582 | WP_001089999.1 | tail assembly protein | - |
| XF37_RS13650 (2655416) | 2655416..2656926 | + | 1511 | Protein_2666 | host specificity protein J | - |
| XF37_RS13655 (2656926) | 2656926..2659493 | + | 2568 | Protein_2667 | host specificity protein J | - |
| XF37_RS13660 (2659561) | 2659561..2660160 | + | 600 | WP_001230508.1 | hypothetical protein | VF |
| XF37_RS13665 (2660225) | 2660225..2661538 | + | 1314 | WP_000268849.1 | ISNCY family transposase KIS | Transposase |
| XF37_RS13670 (2661540) | 2661540..2661809 | + | 270 | WP_001023407.1 | phage tail fiber C-terminal domain-containing protein | - |
| XF37_RS13675 (2661923) | 2661923..2662498 | + | 576 | WP_001131658.1 | hypothetical protein | VF |
| XF37_RS13680 (2662571) | 2662571..2663200 | + | 630 | WP_001356599.1 | hypothetical protein | VF |
| XF37_RS13685 (2663282) | 2663282..2663923 | + | 642 | WP_001143804.1 | hypothetical protein | VF |
| XF37_RS13690 (2664085) | 2664085..2664327 | - | 243 | WP_001120551.1 | DinI-like family protein | - |
| XF37_RS13695 (2664459) | 2664459..2665742 | + | 1284 | Protein_2675 | MHS family MFS transporter YdfJ | - |
| XF37_RS13700 (2665831) | 2665831..2667291 | + | 1461 | WP_000527769.1 | mannitol dehydrogenase family protein | - |
| XF37_RS13705 (2667327) | 2667327..2667530 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| XF37_RS13710 (2667707) | 2667707..2668393 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator rspR | - |
| XF37_RS13715 (2668482) | 2668482..2669228 | - | 747 | WP_000636568.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|