MGE detailed information
MGE type: Conjugative plasmid MGE length: 95375 bp
Accession: NZ_CP075740 Location: 1..95375 Organism: Escherichia coli strain CPF6 Replicon: plasmid pCPF6-IncI1
Accession: NZ_CP075740 Location: 1..95375 Organism: Escherichia coli strain CPF6 Replicon: plasmid pCPF6-IncI1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KKZ13_RS24415 (46) | 46..1077 | + | 1032 | WP_052980407.1 | plasmid replication initiator RepA | - |
| KKZ13_RS24420 (1981) | 1981..2265 | + | 285 | WP_001178087.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| KKZ13_RS24425 (2265) | 2265..2540 | + | 276 | WP_000421259.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| KKZ13_RS24430 (2646) | 2646..2849 | + | 204 | Protein_3 | hypothetical protein | - |
| KKZ13_RS24435 (3351) | 3351..6236 | - | 2886 | WP_001138082.1 | Tn3 family transposase TnpA_ISRsp12 | Transposase |
| KKZ13_RS24440 (6362) | 6362..6559 | + | 198 | Protein_5 | recombinase family protein | - |
| KKZ13_RS24445 (6613) | 6613..7317 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| KKZ13_RS24450 (7342) | 7342..7575 | + | 234 | WP_000624775.1 | hypothetical protein | - |
| KKZ13_RS24455 (8191) | 8191..8478 | - | 288 | WP_009486461.1 | thermonuclease family protein | - |
| KKZ13_RS24460 (8771) | 8771..9207 | + | 437 | Protein_9 | IS66 family transposase ISPpu13 | Transposase |
| KKZ13_RS24465 (9397) | 9397..9771 | + | 375 | WP_001348195.1 | cupin domain-containing protein | - |
| KKZ13_RS24470 (9842) | 9842..10546 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| KKZ13_RS24475 (10693) | 10693..12264 | - | 1572 | WP_029392005.1 | IS66 family transposase ISCro1 | Transposase |
| KKZ13_RS24480 (12284) | 12284..12631 | - | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| KKZ13_RS24485 (12631) | 12631..13308 | - | 678 | WP_001339397.1 | IS66 family transposase ISCro1 | Transposase |
| KKZ13_RS24490 (13534) | 13534..13845 | + | 312 | Protein_15 | aminoglycoside phosphotransferase family protein | - |
| KKZ13_RS24495 (14024) | 14024..14518 | - | 495 | WP_015058884.1 | hypothetical protein | - |
| KKZ13_RS24500 (14574) | 14574..15176 | - | 603 | WP_000521606.1 | ProQ/FINO family protein | - |
| KKZ13_RS24505 (15352) | 15352..16404 | - | 1053 | WP_000655519.1 | hypothetical protein | - |
| KKZ13_RS24510 (16617) | 16617..17207 | - | 591 | WP_001401589.1 | hypothetical protein | - |
| KKZ13_RS24515 (17207) | 17207..17461 | - | 255 | WP_000343106.1 | hypothetical protein | - |
| KKZ13_RS24520 (17994) | 17994..18374 | + | 381 | WP_000465035.1 | hypothetical protein | - |
| KKZ13_RS24525 (18376) | 18376..19155 | + | 780 | WP_001164198.1 | site-specific integrase | - |
| KKZ13_RS24530 (19335) | 19335..19979 | + | 645 | WP_001144036.1 | ParA family protein | - |
| KKZ13_RS24535 (20066) | 20066..20374 | + | 309 | WP_000030199.1 | hypothetical protein | - |
| KKZ13_RS24540 (20788) | 20788..21768 | + | 981 | WP_000688514.1 | plasmid segregation protein ParM | - |
| KKZ13_RS24545 (21761) | 21761..22177 | + | 417 | WP_001278818.1 | plasmid partitioning/stability family protein | - |
| KKZ13_RS24550 (22179) | 22179..23453 | - | 1275 | WP_015058887.1 | translesion error-prone DNA polymerase V subunit UmuC | - |
| KKZ13_RS24555 (23453) | 23453..23890 | - | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| KKZ13_RS24560 (23887) | 23887..24135 | - | 249 | WP_000618110.1 | DinI-like family protein | - |
| KKZ13_RS24565 (24553) | 24553..25455 | + | 903 | WP_001442863.1 | DUF1281 domain-containing protein | - |
| KKZ13_RS24570 (25452) | 25452..25763 | + | 312 | WP_052983489.1 | hypothetical protein | - |
| KKZ13_RS24575 (25839) | 25839..26522 | + | 684 | WP_021513974.1 | DNA methylase | - |
| KKZ13_RS24580 (26523) | 26523..26744 | + | 222 | WP_001104885.1 | hypothetical protein | - |
| KKZ13_RS24585 (26725) | 26725..27191 | + | 467 | Protein_34 | DUF1380 domain-containing protein | - |
| KKZ13_RS24590 (27242) | 27242..28012 | + | 771 | WP_001434682.1 | hypothetical protein | - |
| KKZ13_RS24595 (28429) | 28429..28854 | + | 426 | WP_001198928.1 | antirestriction protein | - |
| KKZ13_RS24600 (28901) | 28901..29323 | + | 423 | WP_000271747.1 | DUF1380 family protein | - |
| KKZ13_RS24605 (29320) | 29320..29511 | + | 192 | WP_065809483.1 | hypothetical protein | - |
| KKZ13_RS24610 (29583) | 29583..29897 | + | 315 | WP_001434357.1 | hypothetical protein | - |
| KKZ13_RS24615 (30281) | 30281..30808 | + | 528 | WP_065809482.1 | single-stranded DNA-binding protein | - |
| KKZ13_RS24620 (30866) | 30866..31099 | + | 234 | WP_000006020.1 | DUF905 domain-containing protein | - |
| KKZ13_RS24625 (31158) | 31158..33116 | + | 1959 | WP_057517088.1 | ParB/RepB/Spo0J family partition protein | - |
| KKZ13_RS24630 (33171) | 33171..33605 | + | 435 | WP_000845898.1 | conjugation system SOS inhibitor PsiB | - |
| KKZ13_RS24635 (33602) | 33602..34321 | + | 720 | WP_001276261.1 | plasmid SOS inhibition protein A | - |
| KKZ13_RS24640 (34318) | 34318..34914 | + | 597 | WP_000978012.1 | hypothetical protein | - |
| KKZ13_RS24645 (35377) | 35377..35877 | + | 501 | WP_000117622.1 | antirestriction protein ArdA | - |
| KKZ13_RS24650 (36606) | 36606..37040 | + | 435 | WP_000218863.1 | hypothetical protein | - |
| KKZ13_RS24655 (37133) | 37133..37399 | + | 267 | WP_001247862.1 | hypothetical protein | - |
| KKZ13_RS24660 (37464) | 37464..38354 | + | 891 | WP_000038399.1 | Recombination-promoting nuclease RpnA | VF |
| KKZ13_RS24665 (38417) | 38417..38611 | + | 195 | WP_001496986.1 | hypothetical protein | - |
| KKZ13_RS24670 (38642) | 38642..38893 | - | 252 | WP_000148286.1 | helix-turn-helix transcriptional regulator | - |
| KKZ13_RS24675 (39474) | 39474..40322 | + | 849 | WP_094316398.1 | DUF4942 domain-containing protein | - |
| KKZ13_RS24680 (40408) | 40408..40743 | - | 336 | WP_000157095.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| KKZ13_RS24685 (40977) | 40977..41309 | + | 333 | WP_094316397.1 | IncI1-type relaxosome accessory protein NikA | - |
| KKZ13_RS24690 (41320) | 41320..44019 | + | 2700 | WP_001405892.1 | Protein TraI | Relaxase |
| KKZ13_RS24695 (44056) | 44056..46347 | - | 2292 | WP_001289276.1 | F-type conjugative transfer protein TrbC | - |
| KKZ13_RS24700 (46340) | 46340..47410 | - | 1071 | WP_000151583.1 | IncI1-type conjugal transfer protein TrbB | - |
| KKZ13_RS24705 (47429) | 47429..48637 | - | 1209 | WP_052980401.1 | IncI1-type conjugal transfer protein TrbA | - |
| - (48801) | 48801..48858 | - | 58 | NuclAT_0 | - | - |
| - (48801) | 48801..48858 | - | 58 | NuclAT_0 | - | - |
| - (48801) | 48801..48858 | - | 58 | NuclAT_0 | - | - |
| - (48801) | 48801..48858 | - | 58 | NuclAT_0 | - | - |
| KKZ13_RS24710 (48913) | 48913..49065 | + | 153 | WP_001331364.1 | Hok/Gef family protein | Toxin Detail |
| KKZ13_RS24715 (49137) | 49137..49388 | - | 252 | WP_001291964.1 | hypothetical protein | - |
| KKZ13_RS24720 (49750) | 49750..49982 | + | 233 | Protein_61 | hypothetical protein | - |
| KKZ13_RS24725 (50047) | 50047..50184 | - | 138 | WP_047088497.1 | hypothetical protein | - |
| KKZ13_RS24730 (50229) | 50229..51455 | - | 1227 | WP_024186316.1 | IS200-IS605 family transposase ISSen6 | Transposase |
| KKZ13_RS24735 (51514) | 51514..51918 | + | 405 | WP_001175009.1 | IS200-IS605 family transposase ISSen6 | Transposase |
| KKZ13_RS24740 (52250) | 52250..52459 | - | 210 | WP_001140543.1 | hemolysin expression modulator Hha | - |
| KKZ13_RS24745 (52557) | 52557..53219 | - | 663 | WP_000644794.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| KKZ13_RS24750 (53290) | 53290..55458 | - | 2169 | WP_000698368.1 | DotA/TraY family protein | - |
| KKZ13_RS24755 (55555) | 55555..56139 | - | 585 | WP_001037985.1 | IncI1-type conjugal transfer protein TraX | - |
| KKZ13_RS24760 (56168) | 56168..57370 | - | 1203 | WP_052980400.1 | IncI1-type conjugal transfer protein TraW | - |
| KKZ13_RS24765 (57337) | 57337..57951 | - | 615 | WP_000337400.1 | IncI1-type conjugal transfer protein TraV | - |
| KKZ13_RS24770 (57951) | 57951..60995 | - | 3045 | WP_052980399.1 | IncI1-type conjugal transfer protein TraU | - |
| KKZ13_RS24775 (61085) | 61085..61885 | - | 801 | WP_001164788.1 | IncI1-type conjugal transfer protein TraT | - |
| KKZ13_RS24780 (61869) | 61869..62057 | - | 189 | WP_001277255.1 | putative conjugal transfer protein TraS | - |
| KKZ13_RS24785 (62121) | 62121..62525 | - | 405 | WP_000086960.1 | IncI1-type conjugal transfer protein TraR | - |
| KKZ13_RS24790 (62576) | 62576..63103 | - | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| KKZ13_RS24795 (63103) | 63103..63807 | - | 705 | WP_000801920.1 | IncI1-type conjugal transfer protein TraP | - |
| KKZ13_RS24800 (63807) | 63807..65096 | - | 1290 | WP_001271994.1 | conjugal transfer protein TraO | - |
| KKZ13_RS24805 (65099) | 65099..66082 | - | 984 | WP_001191879.1 | hypothetical protein | VF |
| KKZ13_RS24810 (66093) | 66093..66785 | - | 693 | WP_000138552.1 | DotI/IcmL family type IV secretion protein | - |
| KKZ13_RS24815 (66782) | 66782..67129 | - | 348 | WP_001055900.1 | conjugal transfer protein | - |
| KKZ13_RS24820 (67147) | 67147..70914 | - | 3768 | WP_001141537.1 | DUF5710 domain-containing protein | - |
| KKZ13_RS24825 (71004) | 71004..71555 | - | 552 | WP_000014584.1 | Phospholipase D | VF |
| KKZ13_RS24830 (71570) | 71570..71860 | - | 291 | WP_001299214.1 | hypothetical protein | - |
| KKZ13_RS24835 (71857) | 71857..73005 | - | 1149 | WP_001024974.1 | putative protein YggR | VF |
| KKZ13_RS24840 (73002) | 73002..73820 | - | 819 | WP_000646095.1 | hypothetical protein | VF |
| KKZ13_RS24845 (73817) | 73817..74275 | - | 459 | WP_001079808.1 | hypothetical protein | VF |
| KKZ13_RS24850 (74670) | 74670..75254 | - | 585 | WP_000977522.1 | histidine phosphatase family protein | - |
| KKZ13_RS24855 (75314) | 75314..76516 | - | 1203 | WP_000976353.1 | conjugal transfer protein TraF | - |
| KKZ13_RS24860 (76602) | 76602..77426 | - | 825 | WP_001545755.1 | conjugal transfer protein TraE | - |
| KKZ13_RS24865 (77577) | 77577..78731 | - | 1155 | WP_001139957.1 | site-specific integrase | - |
| KKZ13_RS24870 (79923) | 79923..80174 | + | 252 | WP_114026219.1 | hypothetical protein | - |
| KKZ13_RS24875 (80167) | 80167..81459 | - | 1293 | WP_060615641.1 | hypothetical protein | VF |
| KKZ13_RS24880 (81459) | 81459..82115 | - | 657 | WP_001401940.1 | hypothetical protein | VF |
| KKZ13_RS24885 (82100) | 82100..82660 | - | 561 | WP_000014005.1 | hypothetical protein | VF |
| KKZ13_RS24890 (82670) | 82670..83284 | - | 615 | WP_052980409.1 | hypothetical protein | VF |
| KKZ13_RS24895 (83301) | 83301..84386 | - | 1086 | WP_001208802.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| KKZ13_RS24900 (84399) | 84399..85952 | - | 1554 | WP_001697923.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| KKZ13_RS24905 (85963) | 85963..86415 | - | 453 | WP_001247333.1 | hypothetical protein | VF |
| KKZ13_RS24910 (86402) | 86402..87697 | - | 1296 | WP_052980408.1 | type 4b pilus protein PilO2 | - |
| KKZ13_RS24915 (87690) | 87690..89372 | - | 1683 | WP_000748143.1 | Outer membrane lipoprotein BfpB | VF |
| KKZ13_RS24920 (89386) | 89386..89823 | - | 438 | WP_000539811.1 | hypothetical protein | VF |
| KKZ13_RS24925 (89823) | 89823..90890 | - | 1068 | WP_001442752.1 | hypothetical protein | VF |
| KKZ13_RS24930 (91642) | 91642..91896 | - | 255 | WP_001136187.1 | PilI type IV pilus biogenesis protein | - |
| KKZ13_RS24935 (92068) | 92068..92751 | - | 684 | WP_000213863.1 | hypothetical protein | - |
| KKZ13_RS24940 (93005) | 93005..93538 | - | 534 | WP_001372168.1 | transcription termination/antitermination NusG family protein | - |
| KKZ13_RS24945 (93980) | 93980..94267 | - | 288 | WP_000074849.1 | conjugal transfer protein TraA | - |
| KKZ13_RS24950 (94185) | 94185..94415 | - | 231 | WP_228772074.1 | ash family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|