MGE detailed information
MGE type: Conjugative plasmid MGE length: 87927 bp
Accession: NZ_CP075700 Location: 1..87927 Organism: Escherichia coli strain STEC2018-607 Replicon: plasmid pSTEC2018_607-c
Accession: NZ_CP075700 Location: 1..87927 Organism: Escherichia coli strain STEC2018-607 Replicon: plasmid pSTEC2018_607-c
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JFX52_RS26565 (1) | 1..978 | + | 978 | WP_000361612.1 | RepB family plasmid replication initiator protein | - |
| JFX52_RS26570 (1257) | 1257..1997 | - | 741 | WP_001066941.1 | tyrosine-type recombinase/integrase | - |
| JFX52_RS28430 (2118) | 2118..2252 | - | 135 | Protein_2 | serine/threonine protein kinase | - |
| JFX52_RS26580 (2761) | 2761..3438 | + | 678 | WP_001339397.1 | IS66 family transposase ISCro1 | Transposase |
| JFX52_RS26585 (3438) | 3438..3785 | + | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| JFX52_RS26590 (3805) | 3805..5376 | + | 1572 | WP_000381395.1 | IS66 family transposase ISCro1 | Transposase |
| JFX52_RS26595 (5461) | 5461..6960 | - | 1500 | WP_032285150.1 | alpha/beta hydrolase | - |
| JFX52_RS26600 (7053) | 7053..7999 | - | 947 | Protein_7 | Outer membrane protease OmpP | VF |
| JFX52_RS26605 (8626) | 8626..9854 | + | 1229 | WP_198777257.1 | IS3 family transposase IS2 | Transposase |
| JFX52_RS26610 (10003) | 10003..10290 | - | 288 | WP_000865085.1 | helix-turn-helix transcriptional regulator | - |
| JFX52_RS26615 (10290) | 10290..10601 | - | 312 | WP_000483535.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| JFX52_RS26620 (10707) | 10707..10847 | - | 141 | WP_001315588.1 | hypothetical protein | - |
| JFX52_RS26625 (11546) | 11546..12403 | - | 858 | WP_198777258.1 | incFII family plasmid replication initiator RepA | - |
| JFX52_RS26630 (12396) | 12396..12470 | - | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| JFX52_RS28435 (12496) | 12496..12639 | + | 144 | WP_071988605.1 | replication protein RepA | - |
| JFX52_RS26635 (12712) | 12712..12960 | - | 249 | WP_000083838.1 | replication regulatory protein RepA | - |
| JFX52_RS26640 (13244) | 13244..13393 | - | 150 | WP_001312851.1 | Hok/Gef family protein | Toxin Detail |
| - (13437) | 13437..13498 | + | 62 | NuclAT_1 | - | Antitoxin Detail |
| - (13437) | 13437..13498 | + | 62 | NuclAT_1 | - | Antitoxin Detail |
| - (13437) | 13437..13498 | + | 62 | NuclAT_1 | - | Antitoxin Detail |
| - (13437) | 13437..13498 | + | 62 | NuclAT_1 | - | Antitoxin Detail |
| JFX52_RS26645 (13673) | 13673..14056 | - | 384 | WP_001109067.1 | hypothetical protein | - |
| JFX52_RS26650 (14159) | 14159..14620 | - | 462 | WP_000760085.1 | thermonuclease family protein | - |
| JFX52_RS26655 (15363) | 15363..15566 | - | 204 | WP_001327131.1 | hypothetical protein | - |
| JFX52_RS26660 (15721) | 15721..16278 | - | 558 | WP_000840474.1 | fertility inhibition protein FinO | - |
| JFX52_RS26665 (16381) | 16381..17241 | - | 861 | WP_000704525.1 | putative protein YcjY | VF |
| JFX52_RS26670 (17300) | 17300..18046 | - | 747 | WP_000205769.1 | conjugal transfer pilus acetylase TraX | - |
| JFX52_RS26675 (18066) | 18066..23336 | - | 5271 | WP_000986998.1 | Multifunctional conjugation protein TraI | Relaxase |
| JFX52_RS26680 (23336) | 23336..25543 | - | 2208 | WP_063121798.1 | type IV conjugative transfer system coupling protein TraD | - |
| JFX52_RS26685 (25796) | 25796..26527 | - | 732 | WP_000850422.1 | conjugal transfer complement resistance protein TraT | - |
| JFX52_RS26690 (26552) | 26552..27073 | - | 522 | WP_000632670.1 | conjugal transfer entry exclusion protein TraS | - |
| JFX52_RS26695 (27106) | 27106..29922 | - | 2817 | WP_001007053.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| JFX52_RS26700 (29919) | 29919..31292 | - | 1374 | WP_000944319.1 | conjugal transfer pilus assembly protein TraH | - |
| JFX52_RS26705 (31279) | 31279..31671 | - | 393 | WP_024248460.1 | F-type conjugal transfer protein TrbF | - |
| JFX52_RS26710 (31658) | 31658..31999 | - | 342 | WP_001442101.1 | P-type conjugative transfer protein TrbJ | - |
| JFX52_RS26715 (31929) | 31929..32474 | - | 546 | WP_000059849.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| JFX52_RS26720 (32461) | 32461..32745 | - | 285 | WP_000624109.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| JFX52_RS26725 (32826) | 32826..33140 | + | 315 | WP_000415568.1 | hypothetical protein | - |
| JFX52_RS26730 (33142) | 33142..33489 | - | 348 | WP_001287914.1 | conjugal transfer protein TrbA | - |
| JFX52_RS26735 (33505) | 33505..34248 | - | 744 | WP_001030378.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| JFX52_RS26740 (34241) | 34241..34498 | - | 258 | WP_000864318.1 | conjugal transfer protein TrbE | - |
| JFX52_RS26745 (34525) | 34525..36333 | - | 1809 | WP_089632924.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| JFX52_RS26750 (36330) | 36330..36968 | - | 639 | WP_000777695.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| JFX52_RS26755 (36977) | 36977..37969 | - | 993 | WP_000830839.1 | conjugal transfer pilus assembly protein TraU | - |
| JFX52_RS26760 (37966) | 37966..38598 | - | 633 | WP_001203717.1 | type-F conjugative transfer system protein TraW | - |
| JFX52_RS26765 (38595) | 38595..38981 | - | 387 | WP_000099690.1 | type-F conjugative transfer system protein TrbI | - |
| JFX52_RS26770 (38978) | 38978..41605 | - | 2628 | WP_001064243.1 | type IV secretion system protein TraC | - |
| JFX52_RS26775 (41765) | 41765..41986 | - | 222 | WP_001278689.1 | conjugal transfer protein TraR | - |
| JFX52_RS26780 (42121) | 42121..42636 | - | 516 | WP_000809838.1 | type IV conjugative transfer system lipoprotein TraV | - |
| JFX52_RS26785 (42633) | 42633..42884 | - | 252 | WP_001038342.1 | conjugal transfer protein TrbG | - |
| JFX52_RS26790 (42877) | 42877..43197 | - | 321 | WP_001057289.1 | conjugal transfer protein TrbD | - |
| JFX52_RS26795 (43184) | 43184..43774 | - | 591 | WP_000002787.1 | conjugal transfer pilus-stabilizing protein TraP | - |
| JFX52_RS26800 (43764) | 43764..45191 | - | 1428 | WP_198777259.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| JFX52_RS26805 (45191) | 45191..45919 | - | 729 | WP_001230787.1 | type-F conjugative transfer system secretin TraK | - |
| JFX52_RS26810 (45906) | 45906..46472 | - | 567 | WP_000399790.1 | type IV conjugative transfer system protein TraE | - |
| JFX52_RS26815 (46494) | 46494..46805 | - | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| JFX52_RS26820 (46820) | 46820..47185 | - | 366 | WP_000340282.1 | type IV conjugative transfer system pilin TraA | - |
| JFX52_RS26825 (47228) | 47228..47443 | - | 216 | WP_001352842.1 | conjugal transfer relaxosome protein TraY | - |
| JFX52_RS26830 (47579) | 47579..48226 | - | 648 | WP_000332520.1 | conjugal transfer transcriptional regulator TraJ | - |
| JFX52_RS26835 (48417) | 48417..48800 | - | 384 | WP_001063020.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| JFX52_RS26840 (49152) | 49152..49742 | + | 591 | WP_277996786.1 | hypothetical protein | VF |
| JFX52_RS26845 (50038) | 50038..50859 | - | 822 | Protein_57 | DUF932 domain-containing protein | - |
| JFX52_RS26850 (50979) | 50979..51266 | - | 288 | WP_000107542.1 | hypothetical protein | - |
| JFX52_RS26855 (51291) | 51291..51497 | - | 207 | WP_032192990.1 | hypothetical protein | - |
| JFX52_RS28440 (51567) | 51567..51704 | + | 138 | Protein_60 | hypothetical protein | - |
| JFX52_RS28445 (51724) | 51724..51954 | - | 231 | WP_071998556.1 | hypothetical protein | - |
| JFX52_RS26860 (52174) | 52174..52299 | - | 126 | WP_001372321.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| JFX52_RS28450 (52241) | 52241..52390 | - | 150 | Protein_63 | plasmid maintenance protein Mok | - |
| - (52376) | 52376..52600 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - (52376) | 52376..52600 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - (52376) | 52376..52600 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - (52376) | 52376..52600 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| JFX52_RS26865 (52412) | 52412..52600 | + | 189 | WP_001299721.1 | hypothetical protein | - |
| JFX52_RS26870 (52569) | 52569..53331 | - | 763 | Protein_65 | plasmid SOS inhibition protein A | - |
| JFX52_RS26875 (53328) | 53328..53762 | - | 435 | WP_000845953.1 | conjugation system SOS inhibitor PsiB | - |
| JFX52_RS26880 (53817) | 53817..55775 | - | 1959 | WP_062859180.1 | ParB/RepB/Spo0J family partition protein | - |
| JFX52_RS26885 (55841) | 55841..56074 | - | 234 | WP_000005990.1 | DUF905 family protein | - |
| JFX52_RS26890 (56137) | 56137..56676 | - | 540 | WP_000290838.1 | single-stranded DNA-binding protein | - |
| JFX52_RS26895 (56702) | 56702..56908 | - | 207 | WP_000275853.1 | hypothetical protein | - |
| JFX52_RS28455 (57149) | 57149..57421 | - | 273 | WP_072118979.1 | hypothetical protein | - |
| JFX52_RS28460 (57319) | 57319..57555 | - | 237 | WP_062876510.1 | hypothetical protein | - |
| JFX52_RS26900 (57555) | 57555..58118 | - | 564 | WP_001315564.1 | class I SAM-dependent methyltransferase | - |
| JFX52_RS26905 (58166) | 58166..59527 | - | 1362 | WP_000199439.1 | DUF3560 domain-containing protein | - |
| JFX52_RS26910 (59579) | 59579..59809 | - | 231 | WP_000218642.1 | hypothetical protein | - |
| JFX52_RS26915 (60730) | 60730..61221 | - | 492 | WP_047090239.1 | DUF1380 family protein | - |
| JFX52_RS26920 (61221) | 61221..61646 | - | 426 | WP_001198893.1 | antirestriction protein | - |
| JFX52_RS26925 (62060) | 62060..62830 | - | 771 | WP_001044386.1 | hypothetical protein | - |
| JFX52_RS26930 (62875) | 62875..63342 | - | 468 | WP_223718850.1 | DUF1380 family protein | - |
| JFX52_RS26935 (63323) | 63323..63544 | - | 222 | WP_000558823.1 | hypothetical protein | - |
| JFX52_RS26940 (63545) | 63545..64228 | - | 684 | WP_044867467.1 | DNA methylase | - |
| JFX52_RS26945 (64304) | 64304..64615 | - | 312 | WP_032236158.1 | hypothetical protein | - |
| JFX52_RS26950 (64612) | 64612..65514 | - | 903 | WP_032284999.1 | DUF1281 domain-containing protein | - |
| JFX52_RS26955 (65591) | 65591..67315 | - | 1725 | WP_000138832.1 | group II intron reverse transcriptase/maturase | - |
| JFX52_RS28465 (68451) | 68451..68585 | + | 135 | WP_229997119.1 | DinI-like family protein | - |
| JFX52_RS26965 (68582) | 68582..69001 | + | 420 | WP_000109083.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| JFX52_RS26970 (68991) | 68991..69958 | + | 968 | Protein_87 | translesion error-prone DNA polymerase V subunit UmuC | - |
| JFX52_RS26975 (69960) | 69960..70376 | - | 417 | WP_001278818.1 | plasmid partitioning/stability family protein | - |
| JFX52_RS26980 (70369) | 70369..71349 | - | 981 | WP_000688502.1 | plasmid segregation protein ParM | - |
| JFX52_RS26985 (71763) | 71763..72071 | - | 309 | WP_000030206.1 | molecular chaperone GroEL | - |
| JFX52_RS26990 (72158) | 72158..72802 | - | 645 | WP_001144036.1 | ParA family protein | - |
| JFX52_RS26995 (72983) | 72983..73504 | - | 522 | Protein_92 | Tyrosine recombinase XerD | VF |
| JFX52_RS27000 (73747) | 73747..74331 | - | 585 | WP_000517560.1 | hypothetical protein | - |
| JFX52_RS27005 (74520) | 74520..75733 | + | 1214 | WP_167774810.1 | IS3 family transposase IS629 | Transposase |
| JFX52_RS27010 (75905) | 75905..78100 | - | 2196 | WP_073972931.1 | Ferric aerobactin receptor | VF |
| JFX52_RS27015 (78106) | 78106..79443 | - | 1338 | WP_000750141.1 | L-lysine N6-monooxygenase | VF |
| JFX52_RS27020 (79440) | 79440..81182 | - | 1743 | WP_001015709.1 | Aerobactin synthase | VF |
| JFX52_RS27025 (81182) | 81182..82129 | - | 948 | WP_001287497.1 | N(6)-hydroxylysine O-acetyltransferase | VF |
| JFX52_RS27030 (82130) | 82130..83854 | - | 1725 | WP_001299620.1 | N(2)-citryl-N(6)-acetyl-N(6)-hydroxylysine synthase | VF |
| JFX52_RS27035 (83990) | 83990..85183 | + | 1194 | WP_000074481.1 | MFS transporter | - |
| JFX52_RS27040 (85569) | 85569..86566 | + | 998 | Protein_101 | IS3 family transposase IS629 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|