MGE detailed information
MGE type: Prophage MGE length: 42442 bp
Accession: NZ_CP075487 Location: 4251472..4293913 Organism: Escherichia coli strain NT1F34 Replicon: chromosome
Accession: NZ_CP075487 Location: 4251472..4293913 Organism: Escherichia coli strain NT1F34 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IGI26_RS20935 (4248200) | 4248200..4248664 | - | 465 | WP_000412428.1 | redox-sensitive transcriptional activator SoxR | - |
| IGI26_RS20940 (4248750) | 4248750..4249073 | + | 324 | WP_000019358.1 | superoxide response transcriptional regulator SoxS | - |
| IGI26_RS20945 (4249076) | 4249076..4250662 | - | 1587 | WP_000019531.1 | c-di-GMP phosphodiesterase PdeC | - |
| IGI26_RS20950 (4251092) | 4251092..4251373 | + | 282 | WP_001295689.1 | YjcB family protein | - |
| IGI26_RS20955 (4251472) | 4251472..4252008 | - | 537 | WP_000168305.1 | single-stranded DNA-binding protein SSB1 | - |
| IGI26_RS20960 (4252262) | 4252262..4255084 | + | 2823 | WP_000357740.1 | excinuclease ABC subunit UvrA | - |
| IGI26_RS20965 (4255119) | 4255119..4255475 | - | 357 | WP_000155657.1 | MmcQ/YjbR family DNA-binding protein | - |
| IGI26_RS20970 (4255479) | 4255479..4255895 | - | 417 | WP_000270375.1 | secondary thiamine-phosphate synthase enzyme YjbQ | - |
| IGI26_RS20975 (4256006) | 4256006..4256718 | - | 713 | Protein_4001 | acid phosphatase AphA | - |
| IGI26_RS23765 (4257120) | 4257120..4257342 | + | 223 | Protein_4002 | hypothetical protein | - |
| IGI26_RS20985 (4257845) | 4257845..4259038 | - | 1194 | WP_000486988.1 | aromatic amino acid transaminase | - |
| IGI26_RS20990 (4259291) | 4259291..4260370 | - | 1080 | WP_001147328.1 | alanine racemase | - |
| IGI26_RS20995 (4260423) | 4260423..4261838 | - | 1416 | WP_000918363.1 | replicative DNA helicase | - |
| IGI26_RS21000 (4261921) | 4261921..4262904 | + | 984 | WP_000235509.1 | hypothetical protein | VF |
| IGI26_RS21005 (4263070) | 4263070..4263312 | - | 243 | WP_000891404.1 | envelope stress response protein PspG | - |
| IGI26_RS21010 (4263446) | 4263446..4264483 | - | 1038 | WP_023277396.1 | tRNA dihydrouridine(20/20a) synthase DusA | - |
| IGI26_RS21015 (4264572) | 4264572..4265669 | + | 1098 | WP_000332259.1 | hypothetical protein ; Integrase | Integrase |
| IGI26_RS21020 (4265730) | 4265730..4265978 | + | 249 | WP_001217553.1 | DinI-like family protein | - |
| IGI26_RS21025 (4266201) | 4266201..4266752 | + | 552 | WP_000543834.1 | SLATT domain-containing protein | - |
| IGI26_RS21030 (4266730) | 4266730..4268100 | + | 1371 | WP_039268535.1 | reverse transcriptase domain-containing protein | - |
| IGI26_RS21035 (4268213) | 4268213..4268797 | - | 585 | WP_051123894.1 | tail fiber assembly protein | - |
| IGI26_RS21040 (4268797) | 4268797..4270137 | - | 1341 | WP_231707768.1 | phage tail protein | - |
| IGI26_RS21045 (4270223) | 4270223..4270477 | - | 255 | Protein_4015 | helix-turn-helix domain-containing protein | - |
| IGI26_RS21050 (4270474) | 4270474..4270710 | - | 237 | WP_001610359.1 | hypothetical protein | - |
| IGI26_RS21055 (4270703) | 4270703..4271281 | - | 579 | WP_225902059.1 | ash family protein | - |
| IGI26_RS23590 (4271211) | 4271211..4271390 | - | 180 | WP_001341559.1 | DUF4222 domain-containing protein | - |
| IGI26_RS21060 (4271536) | 4271536..4272087 | - | 552 | WP_000515860.1 | protein YmfL | - |
| IGI26_RS21065 (4272131) | 4272131..4272331 | - | 201 | WP_000649477.1 | YdaS family helix-turn-helix protein | - |
| IGI26_RS21070 (4272422) | 4272422..4273096 | + | 675 | WP_000859461.1 | LexA family transcriptional regulator | - |
| IGI26_RS21075 (4273783) | 4273783..4274145 | + | 363 | WP_000135680.1 | protein YfdP | - |
| IGI26_RS21080 (4274211) | 4274211..4275035 | + | 825 | WP_000081311.1 | DUF2303 family protein | - |
| IGI26_RS21085 (4275224) | 4275224..4276006 | + | 783 | WP_032158411.1 | hypothetical protein | - |
| IGI26_RS21090 (4276043) | 4276043..4276324 | + | 282 | WP_001093916.1 | pyocin activator PrtN family protein | - |
| IGI26_RS21095 (4276372) | 4276372..4276545 | - | 174 | WP_000390072.1 | hypothetical protein | - |
| IGI26_RS21100 (4276585) | 4276585..4276971 | - | 387 | WP_014640052.1 | hypothetical protein | Toxin Detail |
| IGI26_RS21105 (4277001) | 4277001..4277510 | - | 510 | WP_024174200.1 | Panacea domain-containing protein | Antitoxin Detail |
| IGI26_RS21110 (4277827) | 4277827..4277931 | - | 105 | Protein_4029 | tRNA-dihydrouridine synthase | - |
| IGI26_RS21115 (4278057) | 4278057..4279025 | - | 969 | WP_000654812.1 | IS5 family transposase IS903B | Transposase |
| IGI26_RS21120 (4279360) | 4279360..4280100 | - | 741 | WP_001485178.1 | DUF2713 family protein | - |
| IGI26_RS23770 (4280091) | 4280091..4280375 | - | 285 | WP_077492761.1 | hypothetical protein | - |
| IGI26_RS21125 (4280694) | 4280694..4281209 | + | 516 | WP_001295691.1 | zinc uptake transcriptional repressor Zur | - |
| IGI26_RS21130 (4281251) | 4281251..4281460 | - | 210 | WP_001030593.1 | CsbD family protein | - |
| IGI26_RS21135 (4281576) | 4281576..4282901 | - | 1326 | WP_001301116.1 | MATE family efflux transporter DinF | - |
| IGI26_RS21140 (4282974) | 4282974..4283582 | - | 609 | WP_000646078.1 | transcriptional repressor LexA | - |
| IGI26_RS21145 (4283692) | 4283692..4284060 | - | 369 | WP_000002907.1 | diacylglycerol kinase | - |
| IGI26_RS21150 (4284231) | 4284231..4286654 | + | 2424 | WP_000017354.1 | glycerol-3-phosphate 1-O-acyltransferase PlsB | - |
| IGI26_RS21155 (4286809) | 4286809..4287681 | - | 873 | WP_000455227.1 | 4-hydroxybenzoate octaprenyltransferase | - |
| IGI26_RS21160 (4287694) | 4287694..4288191 | - | 498 | WP_001295693.1 | chorismate lyase | - |
| IGI26_RS21165 (4288414) | 4288414..4289994 | - | 1581 | Protein_4041 | hypothetical protein | VF |
| IGI26_RS21170 (4290223) | 4290223..4291143 | - | 921 | WP_193115249.1 | maltose operon protein MalM | - |
| IGI26_RS21175 (4291386) | 4291386..4292726 | - | 1341 | WP_000973663.1 | maltoporin LamB | - |
| IGI26_RS21180 (4292798) | 4292798..4293913 | - | 1116 | WP_000179165.1 | hypothetical protein | VF |
| IGI26_RS21185 (4294278) | 4294278..4295468 | + | 1191 | WP_000695387.1 | maltose/maltodextrin ABC transporter substrate-binding protein MalE | - |
| IGI26_RS21190 (4295622) | 4295622..4297166 | + | 1545 | WP_001724187.1 | maltose ABC transporter permease MalF | - |
| IGI26_RS21195 (4297181) | 4297181..4298071 | + | 891 | WP_001252058.1 | maltose ABC transporter permease MalG | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|