MGE detailed information
MGE type: Genomic_island MGE length: 48159 bp
Accession: NZ_CP075469 Location: 4165831..4213989 Organism: Escherichia coli strain NT1W22 Replicon: chromosome
Accession: NZ_CP075469 Location: 4165831..4213989 Organism: Escherichia coli strain NT1W22 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IGI32_RS20275 (4161082) | 4161082..4162113 | + | 1032 | WP_159185526.1 | ABC transporter substrate-binding protein | - |
| IGI32_RS20280 (4162182) | 4162182..4164260 | + | 2079 | WP_016234044.1 | iron ABC transporter permease | - |
| IGI32_RS20285 (4164272) | 4164272..4165318 | + | 1047 | WP_159185527.1 | ferric ABC transporter ATP-binding protein | - |
| IGI32_RS23775 (4165576) | 4165576..4165814 | + | 239 | Protein_4004 | IS66 family insertion sequence element accessory protein TnpB | - |
| IGI32_RS23780 (4165831) | 4165831..4166076 | - | 246 | WP_021536688.1 | hypothetical protein | - |
| IGI32_RS20295 (4166413) | 4166413..4167969 | + | 1557 | WP_000544016.1 | L-lactate permease | - |
| IGI32_RS20300 (4168020) | 4168020..4168739 | + | 720 | WP_001102089.1 | (Fe-S)-binding protein | - |
| IGI32_RS20305 (4168751) | 4168751..4170166 | + | 1416 | WP_000054154.1 | LutB/LldF family L-lactate oxidation iron-sulfur protein | - |
| IGI32_RS20310 (4170171) | 4170171..4170869 | + | 699 | WP_021536687.1 | lactate utilization protein C | - |
| IGI32_RS20315 (4171274) | 4171274..4174528 | - | 3255 | WP_115783952.1 | HsdR family type I site-specific deoxyribonuclease | - |
| IGI32_RS20320 (4174623) | 4174623..4176011 | - | 1389 | WP_159185528.1 | restriction endonuclease subunit S | - |
| IGI32_RS20325 (4176001) | 4176001..4177620 | - | 1620 | WP_147692291.1 | class I SAM-dependent DNA methyltransferase | - |
| IGI32_RS20330 (4177957) | 4177957..4178595 | - | 639 | WP_001260389.1 | hypothetical protein | - |
| IGI32_RS20335 (4178684) | 4178684..4179193 | - | 510 | WP_159185529.1 | inovirus-type Gp2 protein | - |
| IGI32_RS20340 (4179471) | 4179471..4179704 | - | 234 | WP_000958492.1 | AlpA family transcriptional regulator | - |
| IGI32_RS20345 (4179773) | 4179773..4180345 | - | 573 | WP_000991606.1 | hypothetical protein | - |
| IGI32_RS20350 (4180360) | 4180360..4180509 | + | 150 | WP_001385640.1 | hypothetical protein | - |
| IGI32_RS20355 (4180728) | 4180728..4181459 | - | 732 | WP_134242917.1 | inovirus Gp2 family protein | - |
| IGI32_RS20365 (4183655) | 4183655..4184611 | + | 957 | WP_000301136.1 | NotI family restriction endonuclease | - |
| IGI32_RS20370 (4184592) | 4184592..4185521 | - | 930 | WP_001328257.1 | DNA (cytosine-5-)-methyltransferase | - |
| IGI32_RS23785 (4185713) | 4185713..4185878 | - | 166 | Protein_4022 | integrase | - |
| IGI32_RS23830 (4185961) | 4185961..4186011 | + | 51 | Protein_4023 | IS3 family transposase ISRaq1 | Transposase |
| IGI32_RS20385 (4186039) | 4186039..4186335 | + | 297 | Protein_4024 | transposase | - |
| IGI32_RS20390 (4186482) | 4186482..4187672 | - | 1191 | Protein_4025 | IS3 family transposase | - |
| IGI32_RS20395 (4187887) | 4187887..4189434 | - | 1548 | WP_001294844.1 | hypothetical protein | - |
| IGI32_RS20400 (4189434) | 4189434..4194392 | - | 4959 | WP_000877066.1 | AAA domain-containing protein | - |
| IGI32_RS20405 (4194600) | 4194600..4194755 | + | 156 | Protein_4028 | integrase | - |
| IGI32_RS20410 (4194792) | 4194792..4195406 | - | 615 | Protein_4029 | IS3 family transposase ISEc48 | Transposase |
| IGI32_RS20415 (4195594) | 4195594..4195923 | + | 330 | WP_000042910.1 | IS66 family transposase ISEc49 | Transposase |
| IGI32_RS20420 (4195910) | 4195910..4196302 | + | 393 | WP_000950652.1 | IS66 family transposase ISEc49 | Transposase |
| IGI32_RS20425 (4196309) | 4196309..4197183 | + | 875 | Protein_4032 | IS66 family transposase ISEc49 | Transposase |
| IGI32_RS20430 (4197179) | 4197179..4197988 | - | 810 | Protein_4033 | hypothetical protein | VF |
| IGI32_RS20435 (4197952) | 4197952..4199631 | - | 1680 | Protein_4034 | hypothetical protein | VF |
| IGI32_RS20440 (4199624) | 4199624..4199794 | - | 171 | Protein_4035 | hypothetical protein | - |
| IGI32_RS20445 (4199883) | 4199883..4200383 | - | 501 | WP_001167446.1 | hypothetical protein | - |
| IGI32_RS20450 (4200651) | 4200651..4200881 | - | 231 | WP_001389194.1 | AlpA family transcriptional regulator | - |
| IGI32_RS20455 (4200950) | 4200950..4201510 | - | 561 | WP_214479624.1 | hypothetical protein | - |
| IGI32_RS20460 (4201525) | 4201525..4201674 | + | 150 | WP_001385640.1 | hypothetical protein | - |
| IGI32_RS20465 (4201893) | 4201893..4202624 | - | 732 | WP_134242917.1 | inovirus Gp2 family protein | - |
| IGI32_RS20470 (4204337) | 4204337..4205128 | + | 792 | WP_000175256.1 | hypothetical protein | - |
| IGI32_RS20475 (4205125) | 4205125..4206111 | - | 987 | WP_029396404.1 | hypothetical protein | - |
| IGI32_RS20480 (4206218) | 4206218..4207102 | + | 885 | WP_159185569.1 | 50S ribosome-binding GTPase | - |
| IGI32_RS20485 (4207221) | 4207221..4207898 | + | 678 | WP_001097362.1 | hypothetical protein | - |
| IGI32_RS20490 (4207904) | 4207904..4208137 | + | 234 | WP_001278288.1 | DUF905 family protein | - |
| IGI32_RS20495 (4208227) | 4208227..4209045 | + | 819 | WP_001175170.1 | DUF932 domain-containing protein | - |
| IGI32_RS20500 (4209122) | 4209122..4209607 | + | 486 | WP_000213717.1 | antirestriction protein | - |
| IGI32_RS20505 (4209623) | 4209623..4210099 | + | 477 | WP_001186744.1 | RadC family protein | - |
| IGI32_RS20515 (4210963) | 4210963..4211184 | + | 222 | WP_000692287.1 | DUF987 domain-containing protein | - |
| IGI32_RS20520 (4211264) | 4211264..4211632 | + | 369 | WP_001389198.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| IGI32_RS20525 (4211722) | 4211722..4212099 | + | 378 | WP_089614471.1 | TA system toxin CbtA family protein | Toxin Detail |
| IGI32_RS20530 (4212096) | 4212096..4212584 | + | 489 | WP_000761678.1 | DUF5983 family protein | - |
| IGI32_RS20535 (4212596) | 4212596..4212793 | + | 198 | WP_000839291.1 | DUF957 domain-containing protein | - |
| IGI32_RS20540 (4212878) | 4212878..4213726 | + | 849 | WP_159185536.1 | DUF4942 domain-containing protein | - |
| IGI32_RS20545 (4213999) | 4213999..4214649 | - | 651 | WP_000056760.1 | 3-keto-L-gulonate-6-phosphate decarboxylase UlaD | - |
| IGI32_RS20550 (4214663) | 4214663..4215127 | - | 465 | WP_000776505.1 | PTS ascorbate transporter subunit IIA | - |
| IGI32_RS20555 (4215137) | 4215137..4215442 | - | 306 | WP_000218362.1 | PTS ascorbate transporter subunit IIB | - |
| IGI32_RS20560 (4215458) | 4215458..4216855 | - | 1398 | WP_151140407.1 | PTS ascorbate transporter subunit IIC | - |
| IGI32_RS20565 (4217210) | 4217210..4218274 | + | 1065 | WP_001301370.1 | L-ascorbate 6-phosphate lactonase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|