MGE detailed information
MGE type: Prophage MGE length: 92430 bp
Accession: NZ_CP075469 Location: 3616085..3708514 Organism: Escherichia coli strain NT1W22 Replicon: chromosome
Accession: NZ_CP075469 Location: 3616085..3708514 Organism: Escherichia coli strain NT1W22 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IGI32_RS17495 (3612694) | 3612694..3613650 | + | 957 | WP_000121359.1 | molybdenum cofactor insertion chaperone PaoD | - |
| IGI32_RS17500 (3613701) | 3613701..3614039 | + | 339 | Protein_3451 | LysR substrate-binding domain-containing protein | - |
| IGI32_RS17505 (3614608) | 3614608..3615624 | + | 1017 | WP_064670530.1 | hypothetical protein | - |
| IGI32_RS17510 (3616085) | 3616085..3617317 | + | 1233 | WP_064670529.1 | hypothetical protein | - |
| IGI32_RS17515 (3617446) | 3617446..3618030 | - | 585 | WP_064670528.1 | tail fiber assembly protein | - |
| IGI32_RS17520 (3618030) | 3618030..3621380 | - | 3351 | WP_151140399.1 | prophage tail fiber N-terminal domain-containing protein | - |
| IGI32_RS17525 (3621445) | 3621445..3621648 | - | 204 | Protein_3456 | Ail/Lom family outer membrane beta-barrel protein | - |
| IGI32_RS17530 (3621645) | 3621645..3621809 | - | 165 | Protein_3457 | phage portal protein | - |
| IGI32_RS23740 (3621811) | 3621811..3621978 | - | 168 | Protein_3458 | terminase | - |
| IGI32_RS17535 (3621953) | 3621953..3622498 | - | 546 | WP_000453558.1 | DNA-packaging protein | - |
| IGI32_RS17540 (3622836) | 3622836..3623156 | + | 321 | WP_000025003.1 | hypothetical protein | - |
| IGI32_RS17545 (3623537) | 3623537..3623980 | - | 444 | WP_085438473.1 | lysis protein | - |
| IGI32_RS17550 (3623977) | 3623977..3624309 | - | 333 | Protein_3462 | lysozyme RrrD | - |
| IGI32_RS17555 (3624310) | 3624310..3624504 | + | 195 | Protein_3463 | phage recombination protein Bet | - |
| IGI32_RS17560 (3624501) | 3624501..3625181 | + | 681 | WP_000186784.1 | YqaJ viral recombinase family protein | - |
| IGI32_RS17565 (3625178) | 3625178..3625360 | + | 183 | WP_072126246.1 | DUF1317 domain-containing protein | - |
| IGI32_RS17570 (3625333) | 3625333..3625524 | + | 192 | WP_000548531.1 | DUF1382 family protein | - |
| IGI32_RS17575 (3625601) | 3625601..3625816 | + | 216 | WP_000188870.1 | hypothetical protein | - |
| IGI32_RS17580 (3625915) | 3625915..3626133 | + | 219 | WP_085438467.1 | TraR/DksA family transcriptional regulator | - |
| IGI32_RS17585 (3626181) | 3626181..3626459 | + | 279 | WP_000488407.1 | DUF4222 domain-containing protein | - |
| IGI32_RS23745 (3626431) | 3626431..3626781 | + | 351 | WP_071791770.1 | helix-turn-helix domain-containing protein | - |
| IGI32_RS17590 (3626703) | 3626703..3627821 | + | 1119 | WP_223411740.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| IGI32_RS23750 (3628324) | 3628324..3628413 | - | 90 | Protein_3472 | tail fiber assembly protein | - |
| IGI32_RS17600 (3628406) | 3628406..3628558 | - | 153 | Protein_3473 | transposase | - |
| IGI32_RS23755 (3628627) | 3628627..3628914 | - | 288 | WP_223411739.1 | S24 family peptidase | - |
| IGI32_RS17605 (3629072) | 3629072..3630154 | + | 1083 | WP_085438563.1 | acyltransferase | - |
| IGI32_RS17610 (3630200) | 3630200..3630364 | - | 165 | WP_021548946.1 | hypothetical protein | - |
| IGI32_RS17615 (3630375) | 3630375..3630791 | - | 417 | WP_136710480.1 | tail assembly chaperone | - |
| IGI32_RS17620 (3631510) | 3631510..3631806 | - | 297 | Protein_3478 | protein StfP | - |
| IGI32_RS17625 (3631794) | 3631794..3632132 | - | 339 | WP_064670553.1 | crossover junction endodeoxyribonuclease RusA | - |
| IGI32_RS17630 (3632129) | 3632129..3632419 | - | 291 | WP_000774473.1 | DUF1364 domain-containing protein | - |
| IGI32_RS17635 (3632412) | 3632412..3632582 | - | 171 | WP_000211034.1 | NinE family protein | - |
| IGI32_RS17640 (3632582) | 3632582..3633037 | - | 456 | WP_064670554.1 | DNA base-flipping protein YbcN | - |
| IGI32_RS17645 (3633034) | 3633034..3633135 | - | 102 | WP_072097297.1 | hypothetical protein | - |
| IGI32_RS17650 (3633230) | 3633230..3634012 | - | 783 | WP_074400827.1 | hypothetical protein | - |
| IGI32_RS17655 (3634187) | 3634187..3634510 | - | 324 | WP_064670555.1 | P22AR C-terminal domain-containing protein | - |
| IGI32_RS17660 (3634622) | 3634622..3636148 | - | 1527 | WP_000709067.1 | hypothetical protein ; Integrase | Integrase |
| IGI32_RS17665 (3636206) | 3636206..3636355 | - | 150 | WP_001301135.1 | protein YlcJ | - |
| IGI32_RS17670 (3636404) | 3636404..3636736 | - | 333 | WP_001070442.1 | SMR family multidrug efflux protein EmrE | - |
| IGI32_RS17675 (3636804) | 3636804..3637106 | - | 303 | WP_000145915.1 | protein ren | - |
| IGI32_RS17680 (3637103) | 3637103..3637804 | - | 702 | WP_000788886.1 | replication protein P | - |
| IGI32_RS17685 (3637801) | 3637801..3638820 | - | 1020 | WP_077883990.1 | replication protein | - |
| IGI32_RS17690 (3638817) | 3638817..3639356 | - | 540 | WP_064670556.1 | toxin YdaT domain-containing protein | - |
| IGI32_RS17695 (3639387) | 3639387..3639614 | - | 228 | WP_000184665.1 | helix-turn-helix domain-containing protein | - |
| IGI32_RS17700 (3639725) | 3639725..3640417 | + | 693 | WP_001295669.1 | helix-turn-helix transcriptional regulator | - |
| IGI32_RS17705 (3640498) | 3640498..3641559 | + | 1062 | WP_000380252.1 | hypothetical protein | - |
| IGI32_RS17710 (3641537) | 3641537..3641914 | + | 378 | WP_000866321.1 | ASCH domain-containing protein | - |
| IGI32_RS17715 (3642390) | 3642390..3642596 | + | 207 | WP_000233576.1 | phage encoded cell division inhibitor protein | - |
| IGI32_RS17720 (3642672) | 3642672..3642968 | + | 297 | WP_033561765.1 | host-nuclease inhibitor Gam family protein | - |
| IGI32_RS17725 (3642974) | 3642974..3643564 | + | 591 | Protein_3499 | hypothetical protein ; Integrase | Integrase |
| IGI32_RS17730 (3643562) | 3643562..3643801 | + | 240 | Protein_3500 | hypothetical protein ; Integrase | Integrase |
| IGI32_RS17735 (3643852) | 3643852..3644549 | + | 698 | WP_225103636.1 | IS1 family transposase IS1X2 | Transposase |
| IGI32_RS17740 (3644579) | 3644579..3645373 | - | 795 | WP_024220864.1 | P-type conjugative transfer protein TrbJ | - |
| IGI32_RS17745 (3645455) | 3645455..3645808 | - | 354 | WP_000218773.1 | conjugal transfer transcriptional regulator TraJ | - |
| IGI32_RS17750 (3646092) | 3646092..3646373 | - | 282 | WP_029380176.1 | hypothetical protein | - |
| IGI32_RS17755 (3647324) | 3647324..3647581 | + | 258 | WP_071840188.1 | HigA family addiction module antitoxin | - |
| IGI32_RS17760 (3647636) | 3647636..3649381 | - | 1746 | WP_000470135.1 | DUF2326 domain-containing protein | - |
| IGI32_RS17765 (3649350) | 3649350..3649598 | - | 249 | WP_000926290.1 | hypothetical protein | - |
| IGI32_RS17770 (3649570) | 3649570..3650550 | - | 981 | WP_001082070.1 | SMEK domain-containing protein | - |
| IGI32_RS17775 (3651243) | 3651243..3652382 | + | 1140 | WP_000784327.1 | hypothetical protein | - |
| IGI32_RS17780 (3652942) | 3652942..3654150 | + | 1209 | WP_000110238.1 | type II restriction endonuclease | - |
| IGI32_RS17785 (3654185) | 3654185..3655618 | - | 1434 | WP_094304446.1 | DNA cytosine methyltransferase | - |
| IGI32_RS17790 (3656022) | 3656022..3656795 | + | 774 | WP_000355484.1 | hypothetical protein | - |
| IGI32_RS17795 (3656856) | 3656856..3657410 | - | 555 | WP_151140400.1 | Tn3 family transposase TnpR_ISPa38 | Transposase |
| IGI32_RS17800 (3657440) | 3657440..3657849 | + | 410 | Protein_3514 | phage tail protein | - |
| IGI32_RS17805 (3657870) | 3657870..3658313 | + | 444 | WP_001008234.1 | tail fiber assembly protein | - |
| IGI32_RS17810 (3658285) | 3658285..3658887 | - | 603 | WP_151140401.1 | tail fiber assembly protein | - |
| IGI32_RS17815 (3658887) | 3658887..3659609 | - | 723 | WP_151140402.1 | phage tail protein | - |
| IGI32_RS17820 (3659613) | 3659613..3660197 | - | 585 | WP_063073499.1 | YmfQ family protein | - |
| IGI32_RS17825 (3660188) | 3660188..3661246 | - | 1059 | WP_028125900.1 | baseplate J/gp47 family protein | - |
| IGI32_RS17830 (3661233) | 3661233..3661658 | - | 426 | WP_000424744.1 | phage GP46 family protein | - |
| IGI32_RS17835 (3661658) | 3661658..3662206 | - | 549 | WP_052921837.1 | phage baseplate assembly protein V | - |
| IGI32_RS17840 (3662206) | 3662206..3663285 | - | 1080 | WP_063073500.1 | baseplate protein | - |
| IGI32_RS17845 (3663282) | 3663282..3664610 | - | 1329 | WP_063073501.1 | DNA circularization N-terminal domain-containing protein | - |
| IGI32_RS17850 (3664664) | 3664664..3665341 | - | 678 | WP_040072272.1 | hypothetical protein | - |
| IGI32_RS17855 (3665423) | 3665423..3667204 | - | 1782 | WP_063073503.1 | phage tail tape measure protein | - |
| IGI32_RS17860 (3667346) | 3667346..3667615 | - | 270 | WP_000661054.1 | phage tail assembly protein | - |
| IGI32_RS17865 (3667615) | 3667615..3667971 | - | 357 | WP_000090998.1 | phage tail tube protein | - |
| IGI32_RS17870 (3667971) | 3667971..3669467 | - | 1497 | WP_151140403.1 | phage tail sheath subtilisin-like domain-containing protein | - |
| IGI32_RS17875 (3669451) | 3669451..3669621 | - | 171 | WP_063073505.1 | DUF2635 domain-containing protein | - |
| IGI32_RS17880 (3669630) | 3669630..3670190 | - | 561 | WP_000779292.1 | hypothetical protein | - |
| IGI32_RS17885 (3670187) | 3670187..3670693 | - | 507 | WP_000224836.1 | hypothetical protein | - |
| IGI32_RS17890 (3670668) | 3670668..3671078 | - | 411 | WP_000702401.1 | phage head closure protein | - |
| IGI32_RS17895 (3671075) | 3671075..3671398 | - | 324 | WP_000927711.1 | head-tail connector protein | - |
| IGI32_RS17900 (3671401) | 3671401..3671601 | - | 201 | WP_000601360.1 | hypothetical protein | - |
| IGI32_RS17905 (3671651) | 3671651..3672856 | - | 1206 | WP_063073507.1 | phage major capsid protein | - |
| IGI32_RS17910 (3672871) | 3672871..3673521 | - | 651 | WP_001193640.1 | HK97 family phage prohead protease | - |
| IGI32_RS17915 (3673499) | 3673499..3674740 | - | 1242 | WP_000466255.1 | phage portal protein | - |
| IGI32_RS17920 (3674740) | 3674740..3674922 | - | 183 | WP_000605605.1 | protein YmfR | - |
| IGI32_RS17925 (3674934) | 3674934..3676655 | - | 1722 | WP_223411732.1 | terminase large subunit | - |
| IGI32_RS17930 (3676669) | 3676669..3677154 | - | 486 | WP_063073508.1 | phage terminase small subunit P27 family | - |
| IGI32_RS17935 (3677280) | 3677280..3677630 | - | 351 | WP_001135220.1 | HNH endonuclease signature motif containing protein | - |
| IGI32_RS17940 (3678155) | 3678155..3678448 | + | 294 | WP_000738423.1 | increased serum survival lipoprotein Iss | - |
| IGI32_RS23825 (3678539) | 3678539..3678721 | - | 183 | WP_123010240.1 | prophage lysis lipoprotein RzoD | - |
| IGI32_RS17950 (3678938) | 3678938..3679414 | - | 477 | WP_001197766.1 | glycoside hydrolase family protein | - |
| IGI32_RS17955 (3679418) | 3679418..3679744 | - | 327 | WP_001120496.1 | phage holin, lambda family | - |
| IGI32_RS17960 (3680063) | 3680063..3681160 | + | 1098 | WP_001532221.1 | hypothetical protein | - |
| IGI32_RS17965 (3681171) | 3681171..3681593 | + | 423 | WP_021552536.1 | hypothetical protein | - |
| IGI32_RS17970 (3681586) | 3681586..3682221 | + | 636 | WP_063073510.1 | hypothetical protein | - |
| IGI32_RS17975 (3682197) | 3682197..3682586 | - | 390 | WP_195686759.1 | antiterminator Q family protein | - |
| IGI32_RS17980 (3682602) | 3682602..3683591 | - | 990 | WP_021552534.1 | DUF968 domain-containing protein | - |
| IGI32_RS17985 (3683599) | 3683599..3684408 | - | 810 | WP_001061445.1 | KilA-N domain-containing protein | - |
| IGI32_RS17990 (3684428) | 3684428..3684817 | - | 390 | WP_000767103.1 | RusA family crossover junction endodeoxyribonuclease | - |
| IGI32_RS17995 (3684814) | 3684814..3685140 | - | 327 | WP_061356387.1 | LexA family transcriptional regulator | - |
| IGI32_RS18000 (3685140) | 3685140..3685634 | - | 495 | WP_074149693.1 | PerC family transcriptional regulator | - |
| IGI32_RS18005 (3685631) | 3685631..3686572 | - | 942 | WP_061356389.1 | helix-turn-helix domain-containing protein | - |
| IGI32_RS18010 (3686562) | 3686562..3686741 | - | 180 | WP_001250269.1 | DUF4222 domain-containing protein | - |
| IGI32_RS18015 (3686917) | 3686917..3687474 | - | 558 | WP_063073513.1 | protein YmfL | - |
| IGI32_RS18020 (3687518) | 3687518..3687718 | - | 201 | WP_000649477.1 | YdaS family helix-turn-helix protein | - |
| IGI32_RS18025 (3687809) | 3687809..3688483 | + | 675 | WP_000848748.1 | LexA family transcriptional repressor | - |
| IGI32_RS18030 (3688718) | 3688718..3688924 | + | 207 | WP_000549626.1 | hypothetical protein | - |
| IGI32_RS18035 (3688896) | 3688896..3689330 | - | 435 | WP_000016389.1 | hypothetical protein | - |
| IGI32_RS23765 (3689474) | 3689474..3689793 | + | 320 | Protein_3562 | hypothetical protein | - |
| IGI32_RS18040 (3689875) | 3689875..3690411 | + | 537 | WP_000008236.1 | 5'-deoxynucleotidase | - |
| IGI32_RS18045 (3690402) | 3690402..3690764 | + | 363 | WP_001242749.1 | phage protein | - |
| IGI32_RS18050 (3690764) | 3690764..3691069 | + | 306 | WP_000206732.1 | protein YfdT | - |
| IGI32_RS23770 (3691069) | 3691069..3691419 | + | 351 | WP_000433939.1 | helix-turn-helix domain-containing protein | - |
| IGI32_RS18055 (3691341) | 3691341..3692459 | + | 1119 | WP_001132557.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| IGI32_RS18065 (3692664) | 3692664..3693917 | - | 1254 | WP_000893278.1 | glutamate-5-semialdehyde dehydrogenase | - |
| IGI32_RS18070 (3693929) | 3693929..3695032 | - | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| IGI32_RS18075 (3695320) | 3695320..3696375 | + | 1056 | WP_000749863.1 | phosphoporin PhoE | - |
| IGI32_RS18080 (3696414) | 3696414..3696815 | - | 402 | WP_000174677.1 | sigma factor-binding protein Crl | - |
| - (3697533) | 3697533..3697613 | - | 81 | NuclAT_11 | - | - |
| - (3697533) | 3697533..3697613 | - | 81 | NuclAT_11 | - | - |
| - (3697533) | 3697533..3697613 | - | 81 | NuclAT_11 | - | - |
| - (3697533) | 3697533..3697613 | - | 81 | NuclAT_11 | - | - |
| IGI32_RS18085 (3696873) | 3696873..3698117 | - | 1245 | WP_000189541.1 | esterase FrsA | - |
| IGI32_RS18090 (3698209) | 3698209..3698667 | - | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| IGI32_RS18095 (3698928) | 3698928..3700385 | + | 1458 | WP_001293003.1 | cytosol nonspecific dipeptidase | - |
| IGI32_RS18100 (3700442) | 3700442..3700963 | - | 522 | Protein_3575 | peptide chain release factor H | - |
| IGI32_RS18105 (3700962) | 3700962..3701165 | - | 204 | Protein_3576 | RtcB family protein | - |
| IGI32_RS18110 (3701411) | 3701411..3701863 | - | 453 | WP_001059847.1 | GNAT family N-acetyltransferase | - |
| IGI32_RS18115 (3701937) | 3701937..3702634 | + | 698 | WP_223367350.1 | IS1 family transposase | - |
| IGI32_RS18120 (3702650) | 3702650..3703048 | - | 399 | WP_001263493.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| IGI32_RS18125 (3703051) | 3703051..3703344 | - | 294 | WP_000554757.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| IGI32_RS18130 (3703396) | 3703396..3704451 | - | 1056 | WP_001226164.1 | DNA polymerase IV | - |
| IGI32_RS18135 (3704522) | 3704522..3705307 | - | 786 | WP_000207587.1 | hypothetical protein | VF |
| IGI32_RS18140 (3705279) | 3705279..3706991 | + | 1713 | Protein_3583 | hypothetical protein | VF |
| IGI32_RS18145 (3707215) | 3707215..3707712 | - | 498 | WP_000006255.1 | REP-associated tyrosine transposase RayT | - |
| IGI32_RS18150 (3707888) | 3707888..3708637 | - | 750 | WP_024192679.1 | hypothetical protein | VF |
| IGI32_RS18155 (3708847) | 3708847..3709107 | + | 261 | WP_000729703.1 | type II toxin-antitoxin system antitoxin DinJ | - |
| IGI32_RS18160 (3709110) | 3709110..3709388 | + | 279 | WP_000615983.1 | type II toxin-antitoxin system mRNA interferase toxin YafQ | - |
| IGI32_RS18165 (3709544) | 3709544..3710284 | + | 741 | WP_001225679.1 | peptidoglycan meso-diaminopimelic acid protein amidase | - |
| IGI32_RS18170 (3710255) | 3710255..3711022 | - | 768 | WP_000333380.1 | class II glutamine amidotransferase | - |
| IGI32_RS18175 (3711228) | 3711228..3711806 | - | 579 | WP_000284050.1 | D-sedoheptulose 7-phosphate isomerase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|