MGE detailed information
MGE type: Conjugative plasmid MGE length: 102015 bp
Accession: NZ_CP075464 Location: 1..102015 Organism: Escherichia coli strain NT1F10 Replicon: plasmid pNT1F10-102k
Accession: NZ_CP075464 Location: 1..102015 Organism: Escherichia coli strain NT1F10 Replicon: plasmid pNT1F10-102k
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IGI19_RS23880 () | 1..858 | + | 858 | WP_123059442.1 | incFII family plasmid replication initiator RepA | - |
| IGI19_RS23885 () | 1822..2073 | + | 252 | WP_001132900.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| IGI19_RS23890 () | 2070..2357 | + | 288 | WP_000222766.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| IGI19_RS23905 () | 5232..5849 | - | 618 | Protein_5 | IS30 family transposase IS30D | Transposase |
| IGI19_RS23910 () | 5917..6174 | - | 258 | Protein_6 | IS3 family transposase IS911 | Transposase |
| IGI19_RS23920 () | 6453..6647 | - | 195 | Protein_7 | IS91 family transposase | - |
| IGI19_RS23925 () | 6815..10948 | + | 4134 | WP_063085579.1 | Hemoglobin-binding protease hbp autotransporter | VF |
| IGI19_RS23930 () | 11057..11448 | + | 392 | Protein_9 | peptide deformylase | - |
| IGI19_RS23935 () | 11495..11761 | - | 267 | Protein_10 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| IGI19_RS23940 () | 11801..12888 | - | 1088 | Protein_11 | IS66 family transposase ISEc8 | Transposase |
| IGI19_RS23945 () | 12923..15889 | - | 2967 | WP_000008826.1 | Tn3 family transposase TnpA_ISPa40 | Transposase |
| IGI19_RS23950 () | 15870..16121 | - | 252 | Protein_13 | helix-turn-helix domain-containing protein | - |
| IGI19_RS23955 () | 16184..16888 | + | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| IGI19_RS23960 () | 16939..17610 | - | 672 | Protein_15 | DUF1281 domain-containing protein | - |
| IGI19_RS23965 () | 18028..18276 | + | 249 | WP_000618110.1 | DinI-like family protein | - |
| IGI19_RS23970 () | 18273..18710 | + | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| IGI19_RS23975 () | 18710..19981 | + | 1272 | WP_000457518.1 | Y-family DNA polymerase | - |
| IGI19_RS23980 () | 19986..20378 | - | 393 | WP_000340829.1 | plasmid partitioning/stability family protein | - |
| IGI19_RS23985 () | 20383..21354 | - | 972 | WP_001103690.1 | plasmid segregation protein ParM | - |
| IGI19_RS23990 () | 21576..22220 | + | 645 | WP_000633913.1 | division plane positioning ATPase MipZ | - |
| IGI19_RS23995 () | 22214..22489 | + | 276 | WP_000239529.1 | hypothetical protein | - |
| IGI19_RS24000 () | 22563..23417 | - | 855 | WP_096309266.1 | site-specific integrase | - |
| IGI19_RS24005 () | 23414..23920 | - | 507 | WP_001505085.1 | hypothetical protein | - |
| IGI19_RS24010 () | 23911..24615 | + | 705 | WP_001505086.1 | IS6-like element IS26 family transposase | - |
| IGI19_RS24015 () | 24764..26089 | - | 1326 | WP_021512928.1 | reactive chlorine resistance oxidoreductase RclA | - |
| IGI19_RS24020 () | 26199..26896 | + | 698 | WP_223417152.1 | IS1 family transposase IS1S | Transposase |
| IGI19_RS24025 () | 26997..27278 | - | 282 | WP_000639434.1 | hypothetical protein | - |
| IGI19_RS24030 () | 27380..28542 | - | 1163 | Protein_29 | IS3 family transposase ISEhe3 | Transposase |
| IGI19_RS24035 () | 28738..32814 | + | 4077 | WP_063121986.1 | Serine protease SepA autotransporter | VF |
| IGI19_RS24040 () | 33000..33767 | - | 768 | WP_001159649.1 | hypothetical protein | VF |
| IGI19_RS24045 () | 33936..34550 | + | 615 | WP_000160640.1 | TIR domain-containing protein | - |
| IGI19_RS24050 () | 34588..35298 | - | 711 | WP_001219114.1 | hypothetical protein | - |
| IGI19_RS24055 () | 35326..35892 | - | 567 | WP_001235698.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| IGI19_RS24060 () | 36056..36556 | + | 501 | Protein_35 | Tn3 family transposase ISEc63 | Transposase |
| IGI19_RS24065 () | 36741..36872 | + | 132 | Protein_36 | Tn3 family transposase TnpR_ISMpo10 | Transposase |
| IGI19_RS24070 () | 36925..37629 | - | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| IGI19_RS24075 () | 37697..38641 | + | 945 | Protein_38 | IS110 family transposase IS5708 | Transposase |
| IGI19_RS24080 () | 39049..39402 | + | 354 | Protein_39 | RNA 3'-terminal phosphate cyclase | - |
| IGI19_RS24085 () | 39445..42150 | - | 2706 | WP_016240421.1 | HTH-type transcriptional regulator MalT | VF |
| IGI19_RS24090 () | 42479..43176 | + | 698 | WP_103215986.1 | IS1 family transposase IS1G | Transposase |
| IGI19_RS24095 () | 43570..44139 | + | 570 | WP_096200282.1 | Major fimbrial subunit SMF-1 | VF |
| IGI19_RS24100 () | 44198..44893 | + | 696 | WP_064160295.1 | putative fimbrial chaperone YadV | VF |
| IGI19_RS24105 () | 44905..47298 | + | 2394 | WP_096200280.1 | Outer membrane usher protein HtrE | VF |
| IGI19_RS24110 () | 47319..48338 | + | 1020 | WP_096180002.1 | fimbrial protein | - |
| IGI19_RS24115 () | 48548..49245 | + | 698 | WP_223429350.1 | IS1 family transposase IS1X3 | Transposase |
| IGI19_RS24120 () | 49309..49884 | - | 576 | WP_166498032.1 | putative cyclic di-GMP phosphodiesterase PdeG | VF |
| IGI19_RS24125 () | 49924..50628 | - | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| IGI19_RS24130 () | 50640..50932 | + | 293 | Protein_49 | hypothetical protein | - |
| IGI19_RS24135 () | 50929..51240 | + | 312 | WP_011254640.1 | hypothetical protein | - |
| IGI19_RS24140 () | 51317..52000 | + | 684 | WP_000086185.1 | DNA methylase | - |
| IGI19_RS24145 () | 52001..52222 | + | 222 | WP_001104873.1 | hypothetical protein | - |
| IGI19_RS24150 () | 52152..52670 | + | 519 | WP_123325260.1 | DUF1380 family protein | - |
| IGI19_RS24155 () | 52721..53497 | + | 777 | WP_001753849.1 | hypothetical protein | - |
| IGI19_RS24160 () | 53574..54686 | + | 1113 | WP_001300563.1 | IS4 family transposase IS421 | Transposase |
| IGI19_RS24165 () | 55263..55688 | + | 426 | WP_001198928.1 | antirestriction protein | - |
| IGI19_RS24170 () | 55735..56157 | + | 423 | WP_000271753.1 | DUF1380 family protein | - |
| IGI19_RS24175 () | 56154..56345 | + | 192 | WP_001027516.1 | hypothetical protein | - |
| IGI19_RS24180 () | 57383..57613 | + | 231 | WP_000218642.1 | hypothetical protein | - |
| IGI19_RS24185 () | 57665..59026 | + | 1362 | WP_000170675.1 | DUF3560 domain-containing protein | - |
| IGI19_RS24190 () | 59074..59637 | + | 564 | WP_001377760.1 | class I SAM-dependent methyltransferase | - |
| IGI19_RS24640 () | 59789..60064 | + | 276 | WP_074156329.1 | hypothetical protein | - |
| IGI19_RS24645 () | 60305..60511 | + | 207 | WP_000547968.1 | hypothetical protein | - |
| IGI19_RS24195 () | 60537..60989 | + | 453 | WP_097331204.1 | single-stranded DNA-binding protein | - |
| IGI19_RS24200 () | 61051..61284 | + | 234 | WP_000006030.1 | DUF905 family protein | - |
| IGI19_RS24205 () | 61349..63307 | + | 1959 | WP_096309213.1 | ParB/RepB/Spo0J family partition protein | - |
| IGI19_RS24210 () | 63362..63796 | + | 435 | WP_096309212.1 | conjugation system SOS inhibitor PsiB | - |
| IGI19_RS24215 () | 63793..64555 | + | 763 | Protein_68 | plasmid SOS inhibition protein A | - |
| IGI19_RS24220 () | 64524..64712 | - | 189 | WP_001299721.1 | hypothetical protein | - |
| - () | 64524..64748 | + | 225 | NuclAT_0 | - | - |
| - () | 64524..64748 | + | 225 | NuclAT_0 | - | - |
| - () | 64524..64748 | + | 225 | NuclAT_0 | - | - |
| - () | 64524..64748 | + | 225 | NuclAT_0 | - | - |
| - | 64681..64746 | - | 66 | - | - | - |
| IGI19_RS24650 () | 64734..64883 | + | 150 | Protein_70 | plasmid maintenance protein Mok | - |
| IGI19_RS24225 () | 64825..64950 | + | 126 | WP_001372321.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| IGI19_RS24655 () | 65170..65400 | + | 231 | WP_072279680.1 | hypothetical protein | - |
| IGI19_RS24660 () | 65398..65571 | - | 174 | Protein_73 | hypothetical protein | - |
| IGI19_RS24665 () | 65641..65847 | + | 207 | WP_000547968.1 | hypothetical protein | - |
| IGI19_RS24230 () | 65872..66159 | + | 288 | WP_000107548.1 | hypothetical protein | - |
| IGI19_RS24235 () | 66278..67099 | + | 822 | WP_001234469.1 | DUF932 domain-containing protein | - |
| IGI19_RS24240 () | 67396..67998 | - | 603 | WP_112918141.1 | hypothetical protein | VF |
| IGI19_RS24245 () | 68319..68702 | + | 384 | WP_166498013.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| IGI19_RS24250 () | 68889..69578 | + | 690 | WP_137440653.1 | conjugal transfer transcriptional regulator TraJ | - |
| IGI19_RS24255 () | 69671..70072 | + | 402 | WP_001369361.1 | conjugal transfer relaxosome DNA-bindin protein TraY | - |
| IGI19_RS24260 () | 70105..70467 | + | 363 | WP_000994784.1 | type IV conjugative transfer system pilin TraA | - |
| IGI19_RS24265 () | 70472..70783 | + | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| IGI19_RS24270 () | 70805..71371 | + | 567 | WP_000399792.1 | type IV conjugative transfer system protein TraE | - |
| IGI19_RS24275 () | 71358..72086 | + | 729 | WP_001230787.1 | type-F conjugative transfer system secretin TraK | - |
| IGI19_RS24280 () | 72086..73513 | + | 1428 | WP_052994575.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| IGI19_RS24285 () | 73503..74090 | + | 588 | WP_000002772.1 | conjugal transfer pilus-stabilizing protein TraP | - |
| IGI19_RS24290 () | 74077..74397 | + | 321 | WP_001057285.1 | conjugal transfer protein TrbD | - |
| IGI19_RS24295 () | 74394..74909 | + | 516 | WP_000724019.1 | type IV conjugative transfer system lipoprotein TraV | - |
| IGI19_RS24300 () | 75044..75265 | + | 222 | WP_001278692.1 | conjugal transfer protein TraR | - |
| IGI19_RS24305 () | 75425..78052 | + | 2628 | WP_001064265.1 | type IV secretion system protein TraC | - |
| IGI19_RS24310 () | 78049..78435 | + | 387 | WP_023148236.1 | type-F conjugative transfer system protein TrbI | - |
| IGI19_RS24315 () | 78432..79064 | + | 633 | WP_001749440.1 | type-F conjugative transfer system protein TraW | - |
| IGI19_RS24320 () | 79061..80053 | + | 993 | WP_023148235.1 | conjugal transfer pilus assembly protein TraU | - |
| IGI19_RS24325 () | 80062..80700 | + | 639 | WP_000777691.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| IGI19_RS24330 () | 80697..82505 | + | 1809 | WP_000821844.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| IGI19_RS24335 () | 82532..82792 | + | 261 | WP_000864348.1 | conjugal transfer protein TrbE | - |
| IGI19_RS24340 () | 82785..83528 | + | 744 | WP_001030376.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| IGI19_RS24345 () | 83689..83925 | + | 237 | WP_001346259.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| IGI19_RS24350 () | 83912..84457 | + | 546 | WP_000052613.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| IGI19_RS24355 () | 84387..84749 | + | 363 | WP_071608404.1 | P-type conjugative transfer protein TrbJ | - |
| IGI19_RS24360 () | 84749..86122 | + | 1374 | WP_001137358.1 | conjugal transfer pilus assembly protein TraH | - |
| IGI19_RS24365 () | 86119..88944 | + | 2826 | WP_001007030.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| IGI19_RS24370 () | 88941..89450 | + | 510 | WP_000628099.1 | conjugal transfer entry exclusion protein TraS | - |
| IGI19_RS24375 () | 89464..90195 | + | 732 | WP_000850424.1 | conjugal transfer complement resistance protein TraT | - |
| IGI19_RS24380 () | 90448..92637 | + | 2190 | WP_193114939.1 | type IV conjugative transfer system coupling protein TraD | - |
| IGI19_RS24385 () | 92637..97907 | + | 5271 | WP_166498016.1 | Multifunctional conjugation protein TraI | Relaxase |
| IGI19_RS24390 () | 97927..98670 | + | 744 | WP_000205704.1 | conjugal transfer pilus acetylase TraX | - |
| IGI19_RS24395 () | 98725..99285 | + | 561 | WP_024184455.1 | fertility inhibition protein FinO | - |
| IGI19_RS24400 () | 99421..99633 | + | 213 | WP_001299730.1 | ANR family transcriptional regulator | - |
| IGI19_RS24405 () | 99879..100340 | + | 462 | WP_000978818.1 | thermonuclease family protein | - |
| IGI19_RS24410 () | 100386..100595 | + | 210 | WP_001299729.1 | hemolysin expression modulator Hha | - |
| IGI19_RS24415 () | 100634..101224 | + | 591 | WP_000766816.1 | DUF2726 domain-containing protein | - |
| IGI19_RS24420 () | 101464..101724 | + | 261 | WP_000083819.1 | replication regulatory protein RepA | - |
| IGI19_RS24685 () | 101818..102003 | + | 186 | Protein_114 | protein CopA/IncA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|