MGE detailed information
MGE type: Prophage MGE length: 55021 bp
Accession: NZ_CP075135 Location: 2083606..2138626 Organism: Salmonella enterica strain CFSAN044888 Replicon: chromosome
Accession: NZ_CP075135 Location: 2083606..2138626 Organism: Salmonella enterica strain CFSAN044888 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A7S10_RS09955 () | 2079189..2079641 | + | 453 | WP_000653693.1 | dihydroneopterin triphosphate diphosphatase | - |
| A7S10_RS09960 () | 2079671..2080411 | + | 741 | WP_000907242.1 | YebC/PmpR family DNA-binding transcriptional regulator | - |
| A7S10_RS09965 () | 2080448..2080969 | + | 522 | WP_000022509.1 | crossover junction endodeoxyribonuclease RuvC | - |
| A7S10_RS09970 () | 2080971..2081570 | - | 600 | WP_000716750.1 | YebB family permuted papain-like enzyme | - |
| A7S10_RS09975 () | 2081779..2082471 | + | 693 | WP_023217397.1 | hypothetical protein | - |
| A7S10_RS09980 () | 2082986..2083597 | + | 612 | WP_000580333.1 | Holliday junction branch migration protein RuvA | - |
| A7S10_RS09985 () | 2083606..2084616 | + | 1011 | WP_000568502.1 | Holliday junction branch migration DNA helicase RuvB | - |
| A7S10_RS09990 () | 2084695..2085480 | - | 786 | WP_000571508.1 | hypothetical protein | VF |
| A7S10_RS09995 () | 2085477..2086232 | - | 756 | WP_070794233.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| A7S10_RS10000 () | 2086311..2087255 | + | 945 | WP_000939597.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| A7S10_RS10005 () | 2087271..2088590 | + | 1320 | WP_001184030.1 | murein DD-endopeptidase MepM | - |
| A7S10_RS10010 () | 2088707..2089678 | + | 972 | WP_000448401.1 | Lipid A biosynthesis myristoyltransferase | VF |
| A7S10_RS10015 () | 2089751..2091193 | - | 1443 | WP_000091156.1 | pyruvate kinase | - |
| A7S10_RS10020 () | 2091317..2092186 | - | 870 | WP_001056719.1 | MurR/RpiR family transcriptional regulator | - |
| A7S10_RS10025 () | 2092528..2094003 | + | 1476 | WP_000301711.1 | glucose-6-phosphate dehydrogenase | - |
| A7S10_RS10030 () | 2094238..2096049 | + | 1812 | WP_001069118.1 | phosphogluconate dehydratase | - |
| A7S10_RS10035 () | 2096087..2096728 | + | 642 | WP_000800494.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| A7S10_RS10040 () | 2096828..2098006 | - | 1179 | WP_000173437.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| A7S10_RS10045 () | 2098137..2098427 | + | 291 | WP_000257723.1 | DNA damage-inducible protein YebG | - |
| A7S10_RS10050 () | 2098495..2098848 | + | 354 | WP_001042123.1 | protein YebF | - |
| A7S10_RS10055 () | 2098942..2099601 | + | 660 | WP_000024707.1 | tellurite resistance TerB family protein | - |
| A7S10_RS10060 () | 2099814..2101865 | + | 2052 | WP_000936990.1 | oligopeptidase B | - |
| A7S10_RS10065 () | 2101902..2102600 | - | 699 | WP_000944280.1 | exodeoxyribonuclease X | - |
| A7S10_RS10070 () | 2102624..2103280 | - | 657 | WP_000100257.1 | carbon-nitrogen hydrolase family protein | - |
| A7S10_RS10075 () | 2103387..2103617 | - | 231 | WP_000856225.1 | DNA polymerase III subunit theta | - |
| A7S10_RS10080 () | 2103755..2104129 | + | 375 | WP_000168393.1 | CopC domain-containing protein YobA | - |
| A7S10_RS10085 () | 2104130..2105005 | + | 876 | WP_000979696.1 | copper homeostasis membrane protein CopD | - |
| A7S10_RS10090 () | 2105022..2105375 | + | 354 | WP_000722368.1 | YebY family protein | - |
| - | 2105477..2105620 | - | 144 | - | - | Antitoxin Detail |
| - | 2105515..2105618 | + | 104 | - | - | Toxin Detail |
| A7S10_RS10095 () | 2105758..2106837 | - | 1080 | Protein_1983 | phage integrase Arm DNA-binding domain-containing protein | - |
| A7S10_RS10100 () | 2106870..2108018 | - | 1149 | Protein_1984 | PD-(D/E)XK nuclease-like domain-containing protein | - |
| A7S10_RS10105 () | 2108010..2108258 | + | 249 | Protein_1985 | glycoside hydrolase family 19 protein | - |
| A7S10_RS10110 () | 2108255..2108788 | + | 534 | WP_001529209.1 | DUF2514 domain-containing protein | - |
| A7S10_RS10115 () | 2109057..2109224 | - | 168 | WP_000789530.1 | lytic enzyme | - |
| A7S10_RS10120 () | 2109527..2110018 | + | 492 | WP_001629197.1 | DUF1441 family protein | - |
| A7S10_RS10125 () | 2110110..2110572 | + | 463 | Protein_1989 | phage terminase large subunit family protein | - |
| A7S10_RS10130 () | 2110613..2111551 | + | 939 | Protein_1990 | tail fiber protein | - |
| A7S10_RS23860 () | 2111552..2111899 | + | 348 | Protein_1991 | tail assembly chaperone | - |
| A7S10_RS10135 () | 2111996..2112196 | - | 201 | WP_031615635.1 | PagK family vesicle-borne virulence factor | - |
| A7S10_RS23865 () | 2112586..2112766 | - | 181 | Protein_1993 | IS3 family transposase | - |
| A7S10_RS10140 () | 2112757..2112858 | + | 102 | Protein_1994 | arsenic transporter | - |
| A7S10_RS23870 () | 2113480..2113712 | + | 233 | Protein_1995 | helix-turn-helix domain-containing protein | - |
| A7S10_RS10155 () | 2114039..2114653 | - | 615 | WP_058344224.1 | disulfide bond formation protein B | - |
| A7S10_RS10160 () | 2114663..2114821 | - | 159 | WP_000480735.1 | DUF5993 family protein | - |
| A7S10_RS10165 () | 2114954..2115868 | - | 915 | WP_001233453.1 | DMT family transporter | - |
| A7S10_RS10170 () | 2116660..2117279 | - | 620 | Protein_1999 | fimbrial protein | - |
| A7S10_RS10175 () | 2117218..2117379 | + | 162 | Protein_2000 | IS256 family transposase IS285 | Transposase |
| A7S10_RS10180 () | 2117389..2117917 | + | 529 | Protein_2001 | IS256 family transposase ISEc39 | Transposase |
| A7S10_RS10185 () | 2118063..2118203 | - | 141 | WP_001576018.1 | hypothetical protein | - |
| A7S10_RS10190 () | 2118369..2118638 | - | 270 | WP_077909932.1 | hypothetical protein | - |
| A7S10_RS10195 () | 2119007..2119426 | + | 420 | WP_000354406.1 | GNAT family N-acetyltransferase | - |
| A7S10_RS10200 () | 2119555..2120031 | - | 477 | WP_001529212.1 | hypothetical protein | - |
| A7S10_RS10205 () | 2120360..2120755 | - | 396 | WP_000422881.1 | DUF1398 domain-containing protein | - |
| A7S10_RS10210 () | 2121439..2122161 | + | 723 | WP_000182069.1 | hypothetical protein | VF |
| A7S10_RS10215 () | 2122446..2122610 | + | 165 | WP_001134850.1 | hypothetical protein | - |
| A7S10_RS10220 () | 2122834..2123484 | + | 651 | WP_058344223.1 | protein-serine/threonine phosphatase | - |
| A7S10_RS10225 () | 2123503..2123694 | - | 192 | WP_000457838.1 | DUF1482 family protein | - |
| A7S10_RS10230 () | 2123805..2124041 | - | 237 | WP_024131167.1 | YebV family protein | - |
| A7S10_RS10235 () | 2124158..2125597 | - | 1440 | WP_058344257.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| A7S10_RS10240 () | 2125676..2128309 | - | 2634 | WP_001644112.1 | hypothetical protein | VF |
| A7S10_RS10245 () | 2128278..2129561 | - | 1284 | WP_001207293.1 | membrane integrity lipid transport subunit YebS | - |
| A7S10_RS10250 () | 2129690..2130187 | + | 498 | WP_001518229.1 | GAF domain-containing protein | - |
| A7S10_RS10255 () | 2130285..2130971 | + | 687 | WP_023207867.1 | RNA chaperone ProQ | - |
| A7S10_RS10260 () | 2130991..2133039 | + | 2049 | WP_023207866.1 | carboxy terminal-processing peptidase | - |
| A7S10_RS10265 () | 2133233..2134114 | + | 882 | WP_000984498.1 | protease HtpX | - |
| A7S10_RS10270 () | 2134162..2135535 | - | 1374 | WP_000416142.1 | MFS transporter | - |
| A7S10_RS10275 () | 2135711..2136502 | + | 792 | WP_001262196.1 | DNA-binding transcriptional regulator KdgR | - |
| A7S10_RS10280 () | 2136714..2136953 | - | 240 | WP_001236778.1 | invasion protein YobH | - |
| A7S10_RS10285 () | 2137111..2137254 | + | 144 | WP_000714547.1 | PhoP/PhoQ regulator MgrB | - |
| A7S10_RS10290 () | 2137325..2137612 | + | 288 | WP_001000660.1 | YebO family protein | - |
| A7S10_RS10295 () | 2138261..2138404 | + | 144 | WP_001537930.1 | DUF2627 domain-containing protein | - |
| A7S10_RS10300 () | 2138417..2138626 | + | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| A7S10_RS10305 () | 2138846..2140591 | + | 1746 | WP_058344220.1 | peptidoglycan glycosyltransferase FtsI | - |
| A7S10_RS10310 () | 2140657..2141466 | + | 810 | WP_058344219.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| A7S10_RS10315 () | 2141463..2142029 | - | 567 | WP_023207864.1 | manganese efflux pump MntP | - |
| A7S10_RS10320 () | 2142439..2142897 | - | 459 | WP_000156280.1 | DUF986 family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|