MGE detailed information
MGE type: Conjugative plasmid MGE length: 137164 bp
Accession: NZ_CP075130 Location: 1..137164 Organism: Salmonella enterica subsp. enterica serovar Rubislaw strain CFSAN044921 Replicon: plasmid pCFSAN044921_1
Accession: NZ_CP075130 Location: 1..137164 Organism: Salmonella enterica subsp. enterica serovar Rubislaw strain CFSAN044921 Replicon: plasmid pCFSAN044921_1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A7S43_RS23555 (A7S43_23545) | 19..348 | + | 330 | WP_000493286.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| A7S43_RS23560 (A7S43_23550) | 329..610 | + | 282 | WP_000780222.1 | helix-turn-helix transcriptional regulator | - |
| A7S43_RS24705 | 980..1201 | + | 222 | Protein_2 | sprT domain-containing protein | - |
| A7S43_RS23565 (A7S43_23555) | 1307..1600 | - | 294 | WP_079905948.1 | YqjK family protein | - |
| A7S43_RS23570 (A7S43_23560) | 1597..1998 | - | 402 | WP_001644747.1 | phage holin family protein | - |
| A7S43_RS23575 (A7S43_23565) | 2142..2495 | - | 354 | WP_001644748.1 | hypothetical protein | - |
| A7S43_RS23580 (A7S43_23570) | 2900..3148 | + | 249 | WP_024153731.1 | DUF883 family protein | - |
| A7S43_RS23585 (A7S43_23575) | 3201..3554 | + | 354 | WP_001644748.1 | hypothetical protein | - |
| A7S43_RS23590 (A7S43_23580) | 3698..4099 | + | 402 | WP_001644747.1 | phage holin family protein | - |
| A7S43_RS23600 (A7S43_23590) | 4363..5371 | + | 1009 | Protein_9 | IS110 family transposase ISSaen1 | Transposase |
| A7S43_RS23605 (A7S43_23595) | 5597..5713 | - | 117 | Protein_10 | IS3 family transposase IS1351 | Transposase |
| A7S43_RS23610 (A7S43_23600) | 6438..7193 | - | 756 | WP_023230123.1 | transcriptional activator SprB | - |
| A7S43_RS23615 (A7S43_23605) | 7186..7587 | - | 402 | WP_230319598.1 | CaiF/GrlA family transcriptional regulator | - |
| A7S43_RS23620 (A7S43_23610) | 8339..8632 | - | 294 | WP_024153544.1 | hypothetical protein | - |
| A7S43_RS23625 (A7S43_23615) | 9173..10275 | + | 1103 | WP_094138224.1 | IS3 family transposase | - |
| A7S43_RS23630 (A7S43_23620) | 11214..12068 | - | 855 | WP_001644065.1 | AraC family transcriptional regulator | - |
| A7S43_RS23635 (A7S43_23625) | 13126..13866 | + | 741 | WP_001066959.1 | tyrosine-type recombinase/integrase | - |
| A7S43_RS23640 (A7S43_23630) | 14150..15142 | - | 993 | WP_077909208.1 | RepB family plasmid replication initiator protein | - |
| A7S43_RS23645 (A7S43_23635) | 16643..17920 | + | 1278 | WP_001644073.1 | HlyD family secretion protein | - |
| A7S43_RS23650 (A7S43_23640) | 17922..20021 | + | 2100 | WP_086375341.1 | peptidase domain-containing ABC transporter | - |
| A7S43_RS23655 (A7S43_23645) | 20493..20666 | + | 174 | WP_023230112.1 | hypothetical protein | - |
| A7S43_RS23660 (A7S43_23650) | 20670..20834 | + | 165 | WP_153260078.1 | hypothetical protein | - |
| A7S43_RS24710 | 20985..21548 | + | 564 | WP_070794405.1 | hypothetical protein | - |
| A7S43_RS23670 (A7S43_23660) | 21622..22110 | - | 489 | WP_024153653.1 | hypothetical protein | - |
| A7S43_RS23675 (A7S43_23665) | 22349..23464 | + | 1116 | WP_001644081.1 | DNA-binding protein | - |
| A7S43_RS23680 (A7S43_23670) | 23550..24320 | + | 771 | WP_240494982.1 | 3'-5' exonuclease | - |
| A7S43_RS23685 (A7S43_23675) | 24373..24768 | + | 396 | WP_001642926.1 | hypothetical protein | - |
| A7S43_RS23690 (A7S43_23680) | 24765..25380 | + | 616 | Protein_27 | DUF2913 family protein | - |
| A7S43_RS23695 (A7S43_23685) | 25377..26318 | - | 942 | WP_042836637.1 | Recombination-promoting nuclease RpnA | VF |
| A7S43_RS23700 (A7S43_23690) | 26674..27369 | - | 696 | WP_024153690.1 | IS6 family transposase ISEas1 | Transposase |
| A7S43_RS24715 | 27416..27547 | - | 132 | WP_254889306.1 | hypothetical protein | - |
| A7S43_RS23705 (A7S43_23695) | 27794..28384 | - | 591 | WP_042836735.1 | DUF2913 family protein | - |
| A7S43_RS23710 (A7S43_23700) | 29319..29558 | - | 240 | Protein_32 | RNA 2'-phosphotransferase | - |
| A7S43_RS23715 (A7S43_23705) | 29879..32668 | + | 2790 | WP_070801099.1 | Outer membrane protein IcsA autotransporter | VF |
| A7S43_RS23720 (A7S43_23710) | 32815..33204 | + | 390 | Protein_34 | IS3 family transposase | - |
| A7S43_RS23725 (A7S43_23715) | 33257..33520 | - | 264 | WP_024153651.1 | hypothetical protein | - |
| A7S43_RS23730 (A7S43_23720) | 33953..34183 | + | 231 | WP_001644959.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| A7S43_RS23735 (A7S43_23725) | 34180..34596 | + | 417 | WP_001644958.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| A7S43_RS24720 | 34738..34938 | - | 201 | Protein_38 | Lrp/AsnC family transcriptional regulator | - |
| A7S43_RS23740 (A7S43_23730) | 34992..35687 | - | 696 | WP_024153690.1 | IS6 family transposase ISEas1 | Transposase |
| A7S43_RS23745 (A7S43_23735) | 35823..36443 | - | 621 | WP_001644950.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| A7S43_RS23750 (A7S43_23740) | 36691..37896 | + | 1206 | WP_001644949.1 | AAA family ATPase | - |
| A7S43_RS23755 (A7S43_23745) | 37896..38870 | + | 975 | WP_001644948.1 | ParB family protein | - |
| A7S43_RS23760 (A7S43_23750) | 38952..39723 | - | 772 | Protein_43 | translesion error-prone DNA polymerase V subunit UmuC | - |
| A7S43_RS23765 (A7S43_23755) | 39746..40576 | + | 831 | Protein_44 | DUF1281 domain-containing protein | - |
| A7S43_RS23770 (A7S43_23760) | 40609..40956 | + | 348 | WP_001644943.1 | hypothetical protein | - |
| A7S43_RS23775 (A7S43_23765) | 41333..42013 | + | 681 | WP_001644941.1 | DNA methylase | - |
| A7S43_RS23780 (A7S43_23770) | 42013..42234 | + | 222 | WP_001644940.1 | hypothetical protein | - |
| A7S43_RS23785 (A7S43_23775) | 42246..42665 | + | 420 | WP_024153631.1 | DUF1380 family protein | - |
| A7S43_RS23790 (A7S43_23780) | 42722..43126 | + | 405 | WP_001644938.1 | DUF1380 family protein | - |
| A7S43_RS23795 (A7S43_23785) | 43194..43961 | + | 768 | WP_024153630.1 | membrane protein | - |
| A7S43_RS23800 (A7S43_23790) | 44382..44810 | + | 429 | WP_024153629.1 | antirestriction protein | - |
| A7S43_RS23805 (A7S43_23795) | 44878..45300 | + | 423 | WP_001658277.1 | DUF1380 family protein | - |
| A7S43_RS23810 (A7S43_23800) | 45345..45755 | + | 411 | WP_024136731.1 | hypothetical protein | - |
| A7S43_RS23815 (A7S43_23805) | 45770..45961 | + | 192 | WP_001022400.1 | hypothetical protein | - |
| A7S43_RS23820 (A7S43_23810) | 46132..46423 | + | 292 | Protein_55 | DNA polymerase III subunit theta | - |
| A7S43_RS23825 (A7S43_23815) | 46594..46779 | - | 186 | WP_094137830.1 | hypothetical protein | - |
| A7S43_RS24725 | 46719..46866 | - | 148 | Protein_57 | hypothetical protein | - |
| A7S43_RS23830 (A7S43_23820) | 47170..47397 | + | 228 | WP_024153757.1 | hypothetical protein | - |
| A7S43_RS23835 (A7S43_23825) | 47489..47719 | + | 231 | WP_024153758.1 | hypothetical protein | - |
| A7S43_RS23840 (A7S43_23830) | 47807..49153 | + | 1347 | WP_024153759.1 | DUF3560 domain-containing protein | - |
| A7S43_RS23845 (A7S43_23835) | 49200..49763 | + | 564 | WP_024153760.1 | class I SAM-dependent methyltransferase | - |
| A7S43_RS23850 (A7S43_23840) | 49791..50189 | + | 399 | WP_070800358.1 | hypothetical protein | - |
| A7S43_RS23855 (A7S43_23845) | 50199..50507 | + | 309 | WP_024153761.1 | hypothetical protein | - |
| A7S43_RS23860 (A7S43_23850) | 50488..51033 | + | 546 | WP_024153762.1 | single-stranded DNA-binding protein SSB2 | - |
| A7S43_RS23865 (A7S43_23855) | 51088..51330 | + | 243 | WP_001628022.1 | DUF905 domain-containing protein | - |
| A7S43_RS23870 (A7S43_23860) | 51402..53447 | + | 2046 | WP_024153763.1 | ParB/RepB/Spo0J family partition protein | - |
| A7S43_RS23875 (A7S43_23865) | 53488..53922 | + | 435 | WP_077909245.1 | conjugation system SOS inhibitor PsiB | - |
| A7S43_RS23880 (A7S43_23870) | 53919..54647 | + | 729 | WP_024153764.1 | plasmid SOS inhibition protein A | - |
| A7S43_RS23885 (A7S43_23875) | 54644..54970 | + | 327 | WP_024153765.1 | hypothetical protein | - |
| A7S43_RS24730 | 55146..55256 | + | 111 | WP_253187076.1 | DUF5431 family protein | - |
| A7S43_RS23890 (A7S43_23880) | 55216..55353 | + | 138 | WP_230319590.1 | type I toxin-antitoxin system Hok family toxin | - |
| A7S43_RS23895 (A7S43_23885) | 55910..57583 | + | 1674 | WP_070794376.1 | group II intron reverse transcriptase/maturase | - |
| A7S43_RS23900 (A7S43_23890) | 57829..58098 | - | 270 | WP_000148351.1 | hypothetical protein | - |
| A7S43_RS23905 (A7S43_23895) | 58192..58479 | - | 288 | WP_070799686.1 | hypothetical protein | - |
| A7S43_RS23910 (A7S43_23900) | 58608..59441 | + | 834 | WP_000113357.1 | DUF932 domain-containing protein | - |
| A7S43_RS23915 (A7S43_23905) | 59606..59917 | - | 312 | WP_024153769.1 | hypothetical protein | - |
| A7S43_RS23920 (A7S43_23910) | 60200..60505 | + | 306 | WP_000045230.1 | plasmid mobilization protein MobA | - |
| A7S43_RS23925 (A7S43_23915) | 60508..62463 | + | 1956 | WP_024153770.1 | Protein TraI | Relaxase |
| A7S43_RS23930 (A7S43_23920) | 62572..64221 | - | 1650 | WP_024153771.1 | Methyl-accepting chemotaxis protein IV | VF |
| A7S43_RS23935 (A7S43_23925) | 64604..64891 | - | 288 | Protein_80 | hypothetical protein | VF |
| A7S43_RS23940 (A7S43_23930) | 64887..65351 | - | 465 | WP_042836857.1 | DUF302 domain-containing protein | - |
| A7S43_RS23945 (A7S43_23935) | 65607..65855 | - | 249 | Protein_82 | hypothetical protein | VF |
| A7S43_RS23950 (A7S43_23940) | 66116..68305 | + | 2190 | WP_042836859.1 | Ferric enterobactin receptor | VF |
| A7S43_RS23955 (A7S43_23945) | 68597..68845 | - | 249 | Protein_84 | Recombination-promoting nuclease RpnD | VF |
| A7S43_RS23960 (A7S43_23950) | 69387..69677 | + | 291 | WP_023228541.1 | hypothetical protein | - |
| A7S43_RS23965 (A7S43_23955) | 69805..70758 | - | 954 | WP_058644968.1 | Recombination-promoting nuclease RpnA | VF |
| A7S43_RS23970 (A7S43_23960) | 71505..72095 | + | 591 | WP_023228538.1 | dienelactone hydrolase family protein | - |
| A7S43_RS23975 (A7S43_23965) | 72664..73227 | - | 564 | WP_023230347.1 | DUF2913 family protein | - |
| A7S43_RS23980 (A7S43_23970) | 73322..73861 | - | 540 | WP_026037017.1 | Phospholipase D | VF |
| A7S43_RS23985 (A7S43_23975) | 73920..76115 | - | 2196 | WP_024153775.1 | hypothetical protein | VF |
| A7S43_RS23990 (A7S43_23980) | 76102..77121 | - | 1020 | WP_024153776.1 | thioredoxin fold domain-containing protein | - |
| A7S43_RS23995 (A7S43_23985) | 77212..78510 | - | 1299 | WP_024153777.1 | hypothetical protein | - |
| A7S43_RS24000 (A7S43_23990) | 79157..79810 | - | 654 | WP_024153778.1 | DUF5710 domain-containing protein | - |
| A7S43_RS24005 (A7S43_23995) | 80035..80193 | + | 159 | WP_001644829.1 | hypothetical protein | - |
| A7S43_RS24010 (A7S43_24000) | 80282..80575 | + | 294 | WP_000987497.1 | DUF1778 domain-containing protein | - |
| A7S43_RS24015 (A7S43_24005) | 80559..81074 | + | 516 | WP_023228531.1 | GNAT family N-acetyltransferase | - |
| A7S43_RS24020 (A7S43_24010) | 81176..81721 | - | 546 | WP_024153780.1 | hypothetical protein | - |
| A7S43_RS24025 (A7S43_24015) | 81732..83864 | - | 2133 | WP_070809145.1 | DotA/TraY family protein | - |
| A7S43_RS24030 (A7S43_24020) | 83916..84434 | - | 519 | WP_024153782.1 | conjugal transfer protein TraX | - |
| A7S43_RS24035 (A7S43_24025) | 84431..85651 | - | 1221 | WP_024153783.1 | conjugal transfer protein TraW | - |
| A7S43_RS24040 (A7S43_24030) | 85670..88732 | - | 3063 | WP_024153784.1 | conjugal transfer protein | - |
| A7S43_RS24045 (A7S43_24035) | 88729..89337 | - | 609 | WP_024153785.1 | hypothetical protein | - |
| A7S43_RS24050 (A7S43_24040) | 89393..89695 | - | 303 | WP_024153786.1 | hypothetical protein | - |
| A7S43_RS24055 (A7S43_24045) | 89800..90252 | - | 453 | WP_024153787.1 | hypothetical protein | - |
| A7S43_RS24060 (A7S43_24050) | 90310..90708 | - | 399 | WP_000404336.1 | hypothetical protein | - |
| A7S43_RS24065 (A7S43_24055) | 90724..91254 | - | 531 | WP_000348307.1 | conjugal transfer protein TraQ | - |
| A7S43_RS24070 (A7S43_24060) | 91264..92019 | - | 756 | WP_024153789.1 | hypothetical protein | - |
| A7S43_RS24075 (A7S43_24065) | 92016..93218 | - | 1203 | WP_024153790.1 | hypothetical protein | VF |
| A7S43_RS24080 (A7S43_24070) | 93218..94246 | - | 1029 | WP_024153791.1 | hypothetical protein | VF |
| A7S43_RS24085 (A7S43_24075) | 94243..94920 | - | 678 | WP_024153792.1 | hypothetical protein | VF |
| A7S43_RS24090 (A7S43_24080) | 94983..95453 | - | 471 | WP_000735118.1 | hypothetical protein | - |
| A7S43_RS24095 (A7S43_24085) | 95469..98918 | - | 3450 | WP_070794374.1 | DUF5710 domain-containing protein | - |
| A7S43_RS24100 (A7S43_24090) | 98930..99196 | - | 267 | WP_024153795.1 | IcmT/TraK family protein | - |
| A7S43_RS24105 (A7S43_24095) | 99186..100355 | - | 1170 | WP_024153796.1 | putative protein YggR | VF |
| A7S43_RS24110 (A7S43_24100) | 100352..101104 | - | 753 | WP_100218507.1 | hypothetical protein | VF |
| A7S43_RS24115 (A7S43_24105) | 101170..101625 | - | 456 | WP_000775487.1 | hypothetical protein | VF |
| A7S43_RS24120 (A7S43_24110) | 101750..102904 | - | 1155 | WP_000089546.1 | site-specific integrase | - |
| A7S43_RS24735 | 102992..103246 | + | 255 | Protein_118 | shufflon system plasmid conjugative transfer pilus tip adhesin PilV | - |
| A7S43_RS24125 (A7S43_24115) | 103330..104763 | - | 1434 | WP_070809146.1 | hypothetical protein | VF |
| A7S43_RS24130 (A7S43_24120) | 104862..105473 | - | 612 | WP_024153798.1 | hypothetical protein | VF |
| A7S43_RS24135 (A7S43_24125) | 105473..105943 | - | 471 | WP_023208005.1 | hypothetical protein | VF |
| A7S43_RS24140 (A7S43_24130) | 105957..106550 | - | 594 | WP_024153799.1 | hypothetical protein | VF |
| A7S43_RS24145 (A7S43_24135) | 106576..107691 | - | 1116 | WP_051142411.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| A7S43_RS24150 (A7S43_24140) | 107684..109183 | - | 1500 | WP_001644792.1 | Type II secretion system protein E | VF |
| A7S43_RS24155 (A7S43_24145) | 109215..109745 | - | 531 | WP_024153800.1 | type IV pilus biogenesis protein PilP | - |
| A7S43_RS24160 (A7S43_24150) | 109732..111015 | - | 1284 | WP_024153801.1 | type 4b pilus protein PilO2 | - |
| A7S43_RS24165 (A7S43_24155) | 111020..112642 | - | 1623 | WP_077957289.1 | Outer membrane lipoprotein BfpB | VF |
| A7S43_RS24170 (A7S43_24160) | 112657..113088 | - | 432 | WP_001644787.1 | hypothetical protein | VF |
| A7S43_RS24175 (A7S43_24165) | 113088..114056 | - | 969 | WP_051142412.1 | hypothetical protein | VF |
| A7S43_RS24180 (A7S43_24170) | 114134..114640 | - | 507 | WP_024153805.1 | hypothetical protein | - |
| A7S43_RS24185 (A7S43_24175) | 114637..114831 | - | 195 | WP_001188429.1 | hypothetical protein | - |
| A7S43_RS24190 (A7S43_24180) | 114843..115019 | - | 177 | WP_086375328.1 | TraR/DksA C4-type zinc finger protein | - |
| A7S43_RS24195 (A7S43_24185) | 115121..115777 | - | 657 | WP_023229167.1 | hypothetical protein | - |
| A7S43_RS24200 (A7S43_24190) | 115959..116504 | - | 546 | WP_024153807.1 | transcription termination factor NusG | - |
| A7S43_RS24205 (A7S43_24195) | 117450..118468 | + | 1019 | Protein_135 | plasmid replication initiator RepA | - |
| A7S43_RS24210 (A7S43_24200) | 120183..125222 | + | 5040 | WP_077957288.1 | YadA-like family protein | - |
| A7S43_RS24215 (A7S43_24205) | 125276..126106 | + | 831 | WP_223156232.1 | Outer membrane protein A | VF |
| A7S43_RS24220 (A7S43_24210) | 126125..126613 | + | 489 | WP_023230137.1 | hypothetical protein | - |
| A7S43_RS24225 (A7S43_24215) | 127032..128702 | + | 1671 | WP_024153810.1 | Hemolysin transporter protein ShlB | VF |
| A7S43_RS24230 (A7S43_24220) | 128748..133280 | + | 4533 | WP_024153811.1 | Hemolysin | VF |
| A7S43_RS24235 (A7S43_24225) | 133333..133683 | + | 351 | Protein_141 | alpha/beta hydrolase | - |
| A7S43_RS24740 | 134015..134191 | + | 177 | WP_230319613.1 | fimbria/pilus outer membrane usher protein | - |
| A7S43_RS24245 (A7S43_24235) | 135165..135431 | - | 267 | WP_024153813.1 | hypothetical protein | - |
| A7S43_RS24250 (A7S43_24240) | 135687..135918 | + | 232 | Protein_144 | IS6 family transposase | - |
| A7S43_RS24745 | 135938..136438 | - | 501 | Protein_145 | DegT/DnrJ/EryC1/StrS family aminotransferase | - |
| A7S43_RS24750 | 136462..136809 | - | 348 | WP_253185255.1 | UDP-2-acetamido-2-deoxy-3-oxo-D-glucuronate aminotransferase | VF |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|