MGE detailed information
MGE type: Prophage MGE length: 55020 bp
Accession: NZ_CP075129 Location: 2035569..2090588 Organism: Salmonella enterica subsp. enterica serovar Rubislaw strain CFSAN044921 Replicon: chromosome
Accession: NZ_CP075129 Location: 2035569..2090588 Organism: Salmonella enterica subsp. enterica serovar Rubislaw strain CFSAN044921 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A7S43_RS09630 () | 2031152..2031604 | + | 453 | WP_000653693.1 | dihydroneopterin triphosphate diphosphatase | - |
| A7S43_RS09635 () | 2031634..2032374 | + | 741 | WP_000907242.1 | YebC/PmpR family DNA-binding transcriptional regulator | - |
| A7S43_RS09640 () | 2032411..2032932 | + | 522 | WP_000022509.1 | crossover junction endodeoxyribonuclease RuvC | - |
| A7S43_RS09645 () | 2032934..2033533 | - | 600 | WP_000716750.1 | YebB family permuted papain-like enzyme | - |
| A7S43_RS09650 () | 2033742..2034434 | + | 693 | WP_023217397.1 | hypothetical protein | - |
| A7S43_RS09655 () | 2034949..2035560 | + | 612 | WP_000580333.1 | Holliday junction branch migration protein RuvA | - |
| A7S43_RS09660 () | 2035569..2036579 | + | 1011 | WP_000568502.1 | Holliday junction branch migration DNA helicase RuvB | - |
| A7S43_RS09665 () | 2036658..2037443 | - | 786 | WP_000571508.1 | hypothetical protein | VF |
| A7S43_RS09670 () | 2037440..2038195 | - | 756 | WP_070794233.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| A7S43_RS09675 () | 2038274..2039218 | + | 945 | WP_000939597.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| A7S43_RS09680 () | 2039234..2040553 | + | 1320 | WP_001184030.1 | murein DD-endopeptidase MepM | - |
| A7S43_RS09685 () | 2040670..2041641 | + | 972 | WP_000448401.1 | Lipid A biosynthesis myristoyltransferase | VF |
| A7S43_RS09690 () | 2041714..2043156 | - | 1443 | WP_000091156.1 | pyruvate kinase | - |
| A7S43_RS09695 () | 2043280..2044149 | - | 870 | WP_001056719.1 | MurR/RpiR family transcriptional regulator | - |
| A7S43_RS09700 () | 2044491..2045966 | + | 1476 | WP_000301711.1 | glucose-6-phosphate dehydrogenase | - |
| A7S43_RS09705 () | 2046201..2048012 | + | 1812 | WP_001069118.1 | phosphogluconate dehydratase | - |
| A7S43_RS09710 () | 2048050..2048691 | + | 642 | WP_000800494.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| A7S43_RS09715 () | 2048791..2049969 | - | 1179 | WP_000173437.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| A7S43_RS09720 () | 2050100..2050390 | + | 291 | WP_000257723.1 | DNA damage-inducible protein YebG | - |
| A7S43_RS09725 () | 2050458..2050811 | + | 354 | WP_001042123.1 | protein YebF | - |
| A7S43_RS09730 () | 2050905..2051564 | + | 660 | WP_000024707.1 | tellurite resistance TerB family protein | - |
| A7S43_RS09735 () | 2051777..2053828 | + | 2052 | WP_000936990.1 | oligopeptidase B | - |
| A7S43_RS09740 () | 2053865..2054563 | - | 699 | WP_000944280.1 | exodeoxyribonuclease X | - |
| A7S43_RS09745 () | 2054587..2055243 | - | 657 | WP_000100257.1 | carbon-nitrogen hydrolase family protein | - |
| A7S43_RS09750 () | 2055350..2055580 | - | 231 | WP_000856225.1 | DNA polymerase III subunit theta | - |
| A7S43_RS09755 () | 2055718..2056092 | + | 375 | WP_000168393.1 | CopC domain-containing protein YobA | - |
| A7S43_RS09760 () | 2056093..2056968 | + | 876 | WP_000979696.1 | copper homeostasis membrane protein CopD | - |
| A7S43_RS09765 () | 2056985..2057338 | + | 354 | WP_000722368.1 | YebY family protein | - |
| - | 2057440..2057583 | - | 144 | - | - | Antitoxin Detail |
| - | 2057478..2057581 | + | 104 | - | - | Toxin Detail |
| A7S43_RS09770 () | 2057721..2058800 | - | 1080 | Protein_1918 | phage integrase Arm DNA-binding domain-containing protein | - |
| A7S43_RS09775 () | 2058833..2059981 | - | 1149 | Protein_1919 | PD-(D/E)XK nuclease-like domain-containing protein | - |
| A7S43_RS09780 () | 2059973..2060221 | + | 249 | Protein_1920 | glycoside hydrolase family 19 protein | - |
| A7S43_RS09785 () | 2060218..2060751 | + | 534 | WP_001529209.1 | DUF2514 domain-containing protein | - |
| A7S43_RS09790 () | 2061020..2061187 | - | 168 | WP_000789530.1 | lytic enzyme | - |
| A7S43_RS09795 () | 2061490..2061981 | + | 492 | WP_070809055.1 | DUF1441 family protein | - |
| A7S43_RS09800 () | 2062073..2062535 | + | 463 | Protein_1924 | phage terminase large subunit family protein | - |
| A7S43_RS09805 () | 2062576..2063514 | + | 939 | Protein_1925 | tail fiber protein | - |
| A7S43_RS24525 () | 2063515..2063862 | + | 348 | Protein_1926 | tail assembly chaperone | - |
| A7S43_RS09810 () | 2063959..2064159 | - | 201 | WP_031615635.1 | PagK family vesicle-borne virulence factor | - |
| A7S43_RS24530 () | 2064549..2064729 | - | 181 | Protein_1928 | IS3 family transposase | - |
| A7S43_RS09815 () | 2064720..2064821 | + | 102 | Protein_1929 | arsenic transporter | - |
| A7S43_RS24535 () | 2065443..2065675 | + | 233 | Protein_1930 | helix-turn-helix domain-containing protein | - |
| A7S43_RS09830 () | 2066002..2066616 | - | 615 | WP_058344224.1 | disulfide bond formation protein B | - |
| A7S43_RS09835 () | 2066626..2066784 | - | 159 | WP_000480735.1 | DUF5993 family protein | - |
| A7S43_RS09840 () | 2066917..2067831 | - | 915 | WP_001233453.1 | DMT family transporter | - |
| A7S43_RS09845 () | 2068623..2069242 | - | 620 | Protein_1934 | fimbrial protein | - |
| A7S43_RS09850 () | 2069181..2069342 | + | 162 | Protein_1935 | IS256 family transposase IS285 | Transposase |
| A7S43_RS09855 () | 2069352..2069880 | + | 529 | Protein_1936 | IS256 family transposase ISEc39 | Transposase |
| A7S43_RS09860 () | 2070026..2070166 | - | 141 | WP_001576018.1 | hypothetical protein | - |
| A7S43_RS09865 () | 2070332..2070601 | - | 270 | WP_077909932.1 | hypothetical protein | - |
| A7S43_RS09870 () | 2070970..2071389 | + | 420 | WP_000354406.1 | GNAT family N-acetyltransferase | - |
| A7S43_RS09875 () | 2071518..2071994 | - | 477 | WP_001529212.1 | hypothetical protein | - |
| A7S43_RS09880 () | 2072323..2072718 | - | 396 | WP_000422881.1 | DUF1398 domain-containing protein | - |
| A7S43_RS09885 () | 2073402..2074124 | + | 723 | WP_000182069.1 | hypothetical protein | VF |
| A7S43_RS09890 () | 2074409..2074573 | + | 165 | WP_001134850.1 | hypothetical protein | - |
| A7S43_RS09895 () | 2074797..2075447 | + | 651 | WP_070809056.1 | protein-serine/threonine phosphatase | - |
| A7S43_RS09900 () | 2075466..2075657 | - | 192 | WP_000457838.1 | DUF1482 family protein | - |
| A7S43_RS09905 () | 2075768..2076004 | - | 237 | WP_024131167.1 | YebV family protein | - |
| A7S43_RS09910 () | 2076121..2077560 | - | 1440 | WP_058344257.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| A7S43_RS09915 () | 2077638..2080271 | - | 2634 | WP_001644112.1 | hypothetical protein | VF |
| A7S43_RS09920 () | 2080240..2081523 | - | 1284 | WP_001207293.1 | membrane integrity lipid transport subunit YebS | - |
| A7S43_RS09925 () | 2081652..2082149 | + | 498 | WP_001518229.1 | GAF domain-containing protein | - |
| A7S43_RS09930 () | 2082247..2082933 | + | 687 | WP_023207867.1 | RNA chaperone ProQ | - |
| A7S43_RS09935 () | 2082953..2085001 | + | 2049 | WP_023207866.1 | carboxy terminal-processing peptidase | - |
| A7S43_RS09940 () | 2085195..2086076 | + | 882 | WP_000984498.1 | protease HtpX | - |
| A7S43_RS09945 () | 2086124..2087497 | - | 1374 | WP_000416142.1 | MFS transporter | - |
| A7S43_RS09950 () | 2087673..2088464 | + | 792 | WP_001262196.1 | DNA-binding transcriptional regulator KdgR | - |
| A7S43_RS09955 () | 2088676..2088915 | - | 240 | WP_001236778.1 | invasion protein YobH | - |
| A7S43_RS09960 () | 2089073..2089216 | + | 144 | WP_000714547.1 | PhoP/PhoQ regulator MgrB | - |
| A7S43_RS09965 () | 2089287..2089574 | + | 288 | WP_001000660.1 | YebO family protein | - |
| A7S43_RS09970 () | 2090223..2090366 | + | 144 | WP_001537930.1 | DUF2627 domain-containing protein | - |
| A7S43_RS09975 () | 2090379..2090588 | + | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| A7S43_RS09980 () | 2090808..2092553 | + | 1746 | WP_058344220.1 | peptidoglycan glycosyltransferase FtsI | - |
| A7S43_RS09985 () | 2092619..2093428 | + | 810 | WP_058344219.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| A7S43_RS09990 () | 2093425..2093991 | - | 567 | WP_023207864.1 | manganese efflux pump MntP | - |
| A7S43_RS09995 () | 2094401..2094859 | - | 459 | WP_000156280.1 | DUF986 family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|