MGE detailed information
MGE type: Mobilizable plasmid MGE length: 48292 bp
Accession: NZ_CP075060 Location: 1..48292 Organism: Escherichia coli strain TCM_B_2 Replicon: plasmid pCMY_B2_5
Accession: NZ_CP075060 Location: 1..48292 Organism: Escherichia coli strain TCM_B_2 Replicon: plasmid pCMY_B2_5
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H4F95_RS02855 (46) | 46..1077 | + | 1032 | WP_023518831.1 | plasmid replication initiator RepA | - |
| H4F95_RS02860 (1773) | 1773..1913 | + | 141 | WP_032072206.1 | hypothetical protein | - |
| H4F95_RS02865 (2146) | 2146..2655 | - | 510 | WP_012783913.1 | hypothetical protein | - |
| H4F95_RS02870 (2711) | 2711..3313 | - | 603 | WP_001703912.1 | ProQ/FINO family protein | - |
| H4F95_RS02875 (3667) | 3667..5013 | + | 1347 | WP_039052405.1 | protein YagA | - |
| H4F95_RS02880 (5536) | 5536..5838 | - | 303 | WP_001245884.1 | hypothetical protein | - |
| H4F95_RS02885 (5835) | 5835..6461 | - | 627 | WP_000587689.1 | ParA family plasmid-partitioning AAA ATPase | - |
| H4F95_RS02890 (6649) | 6649..7920 | - | 1272 | WP_001703910.1 | Y-family DNA polymerase | - |
| H4F95_RS02895 (7920) | 7920..8357 | - | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| H4F95_RS02900 (8354) | 8354..8602 | - | 249 | WP_000618110.1 | DinI-like family protein | - |
| H4F95_RS02905 (9020) | 9020..9922 | + | 903 | WP_001739825.1 | DUF1281 domain-containing protein | - |
| H4F95_RS26320 (9926) | 9926..10012 | + | 87 | Protein_11 | hypothetical protein | - |
| H4F95_RS02910 (10017) | 10017..10352 | - | 336 | WP_001340323.1 | hypothetical protein | - |
| H4F95_RS02915 (10690) | 10690..11670 | + | 981 | WP_012783921.1 | plasmid segregation protein ParM | - |
| H4F95_RS02920 (11673) | 11673..12095 | + | 423 | WP_000774832.1 | plasmid partitioning/stability family protein | - |
| H4F95_RS02925 (12099) | 12099..12409 | + | 311 | Protein_15 | hypothetical protein | - |
| H4F95_RS02930 (12485) | 12485..13168 | + | 684 | WP_000086127.1 | DNA methylase | - |
| H4F95_RS02935 (13169) | 13169..13390 | + | 222 | WP_001104873.1 | hypothetical protein | - |
| H4F95_RS02940 (13320) | 13320..13838 | + | 519 | WP_202864534.1 | DUF1380 family protein | - |
| H4F95_RS02945 (13883) | 13883..14653 | + | 771 | WP_011264064.1 | hypothetical protein | - |
| H4F95_RS02950 (15071) | 15071..15496 | + | 426 | WP_001198928.1 | antirestriction protein | - |
| H4F95_RS02955 (15543) | 15543..15965 | + | 423 | WP_000271762.1 | DUF1380 family protein | - |
| H4F95_RS02960 (15962) | 15962..16153 | + | 192 | WP_001027495.1 | hypothetical protein | - |
| H4F95_RS02965 (16224) | 16224..16538 | + | 315 | WP_001434357.1 | hypothetical protein | - |
| H4F95_RS02970 (17574) | 17574..19475 | + | 1902 | WP_000936285.1 | group II intron reverse transcriptase/maturase | - |
| H4F95_RS02975 (19658) | 19658..20947 | + | 1290 | Protein_25 | hypothetical protein | - |
| H4F95_RS02980 (21000) | 21000..21434 | + | 435 | WP_001402001.1 | conjugation system SOS inhibitor PsiB | - |
| H4F95_RS02985 (21431) | 21431..22150 | + | 720 | WP_001276270.1 | plasmid SOS inhibition protein A | - |
| H4F95_RS02990 (22147) | 22147..22743 | + | 597 | WP_000977995.1 | hypothetical protein | - |
| H4F95_RS02995 (23205) | 23205..23705 | + | 501 | WP_000117626.1 | antirestriction protein ArdA | - |
| H4F95_RS03000 (24434) | 24434..24868 | + | 435 | WP_000218858.1 | hypothetical protein | - |
| H4F95_RS03005 (24962) | 24962..25228 | + | 267 | WP_000804663.1 | hypothetical protein | - |
| H4F95_RS03010 (25405) | 25405..25794 | + | 390 | WP_000833767.1 | hypothetical protein | - |
| H4F95_RS03015 (25791) | 25791..26693 | + | 903 | WP_011264057.1 | Recombination-promoting nuclease RpnA | VF |
| H4F95_RS03020 (26755) | 26755..26961 | + | 207 | WP_000150314.1 | hypothetical protein | VF |
| H4F95_RS03025 (26992) | 26992..27243 | - | 252 | WP_000148285.1 | helix-turn-helix transcriptional regulator | - |
| H4F95_RS03035 (27823) | 27823..28671 | + | 849 | WP_001599394.1 | DUF4942 domain-containing protein | - |
| H4F95_RS03040 (28758) | 28758..29093 | - | 336 | WP_021529212.1 | hypothetical protein | - |
| H4F95_RS03045 (29327) | 29327..29659 | + | 333 | WP_001283947.1 | IncI1-type relaxosome accessory protein NikA | - |
| H4F95_RS03050 (29670) | 29670..32369 | + | 2700 | WP_011264053.1 | Protein TraI | Relaxase |
| H4F95_RS03055 (32407) | 32407..34698 | - | 2292 | WP_011264051.1 | F-type conjugative transfer protein TrbC | - |
| H4F95_RS03060 (34691) | 34691..35761 | - | 1071 | WP_011264050.1 | IncI1-type conjugal transfer protein TrbB | - |
| H4F95_RS03065 (35780) | 35780..36988 | - | 1209 | WP_011264049.1 | IncI1-type conjugal transfer protein TrbA | - |
| - (37168) | 37168..37225 | - | 58 | NuclAT_1 | - | - |
| - (37168) | 37168..37225 | - | 58 | NuclAT_1 | - | - |
| - (37168) | 37168..37225 | - | 58 | NuclAT_1 | - | - |
| - (37168) | 37168..37225 | - | 58 | NuclAT_1 | - | - |
| H4F95_RS03070 (37295) | 37295..38077 | - | 783 | WP_023063753.1 | protein FinQ | - |
| H4F95_RS03075 (38273) | 38273..38590 | + | 318 | WP_000118520.1 | quaternary ammonium compound efflux SMR transporter SugE | - |
| H4F95_RS03080 (38587) | 38587..39120 | - | 534 | WP_001221666.1 | lipocalin family protein | - |
| H4F95_RS03085 (39214) | 39214..40359 | - | 1146 | WP_039023136.1 | Beta-lactamase | ARG |
| H4F95_RS26325 (41296) | 41296..41394 | + | 99 | Protein_48 | ethanolamine utilization protein EutE | - |
| H4F95_RS03095 (41466) | 41466..41675 | - | 210 | WP_000062603.1 | HEAT repeat domain-containing protein | - |
| H4F95_RS03100 (42067) | 42067..42243 | + | 177 | WP_001054897.1 | hypothetical protein | - |
| H4F95_RS26550 (42308) | 42308..42403 | - | 96 | WP_000609148.1 | DinQ-like type I toxin DqlB | - |
| H4F95_RS03110 (42904) | 42904..43155 | + | 252 | WP_001291964.1 | hypothetical protein | - |
| H4F95_RS03115 (43227) | 43227..43379 | - | 153 | WP_001387489.1 | Hok/Gef family protein | Toxin Detail |
| - (43431) | 43431..43491 | + | 61 | NuclAT_0 | - | Antitoxin Detail |
| - (43431) | 43431..43491 | + | 61 | NuclAT_0 | - | Antitoxin Detail |
| - (43431) | 43431..43491 | + | 61 | NuclAT_0 | - | Antitoxin Detail |
| - (43431) | 43431..43491 | + | 61 | NuclAT_0 | - | Antitoxin Detail |
| H4F95_RS03120 (43700) | 43700..44074 | + | 375 | WP_223349261.1 | hypothetical protein | - |
| H4F95_RS03125 (44227) | 44227..45384 | + | 1158 | Protein_55 | IS1380 family transposase ISEcp1 | Transposase |
| H4F95_RS03130 (45440) | 45440..46137 | + | 698 | WP_095033700.1 | IS1-like element IS1B family transposase | - |
| H4F95_RS03135 (46148) | 46148..46456 | - | 309 | WP_039023235.1 | transcription termination/antitermination NusG family protein | - |
| H4F95_RS03140 (46898) | 46898..47185 | - | 288 | WP_000074855.1 | conjugal transfer protein TraA | - |
| H4F95_RS26330 (47223) | 47223..47381 | - | 159 | Protein_59 | ash family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|