MGE detailed information
MGE type: Prophage MGE length: 75915 bp
Accession: NZ_CP074428 Location: 2639590..2715504 Organism: Salmonella sp. SJTUF14523 Replicon: chromosome
Accession: NZ_CP074428 Location: 2639590..2715504 Organism: Salmonella sp. SJTUF14523 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KFD69_RS12815 () | 2635319..2635777 | + | 459 | WP_000156284.1 | DUF986 family protein | - |
| KFD69_RS12820 () | 2636187..2636753 | + | 567 | WP_001518359.1 | manganese efflux pump MntP | - |
| KFD69_RS12825 () | 2636750..2637559 | - | 810 | WP_000010923.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| KFD69_RS12830 () | 2637625..2639370 | - | 1746 | WP_000730322.1 | peptidoglycan glycosyltransferase FtsI | - |
| KFD69_RS12835 () | 2639590..2639799 | - | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| KFD69_RS12840 () | 2639812..2639955 | - | 144 | WP_001537930.1 | DUF2627 domain-containing protein | - |
| KFD69_RS12845 () | 2640604..2640891 | - | 288 | WP_001000660.1 | YebO family protein | - |
| KFD69_RS12850 () | 2640962..2641105 | - | 144 | WP_000714547.1 | PhoP/PhoQ regulator MgrB | - |
| KFD69_RS12855 () | 2641263..2641502 | + | 240 | WP_001236777.1 | invasion protein YobH | - |
| KFD69_RS12860 () | 2641714..2642505 | - | 792 | WP_001262195.1 | DNA-binding transcriptional regulator KdgR | - |
| KFD69_RS12865 () | 2642681..2644054 | + | 1374 | WP_000416139.1 | MFS transporter | - |
| KFD69_RS12870 () | 2644102..2644983 | - | 882 | WP_000984498.1 | protease HtpX | - |
| KFD69_RS12875 () | 2645177..2647225 | - | 2049 | WP_001091237.1 | carboxy terminal-processing peptidase | - |
| KFD69_RS12880 () | 2647245..2647931 | - | 687 | WP_000431401.1 | RNA chaperone ProQ | - |
| KFD69_RS12885 () | 2648029..2648526 | - | 498 | WP_001518229.1 | GAF domain-containing protein | - |
| KFD69_RS12890 () | 2648655..2649938 | + | 1284 | WP_001207294.1 | membrane integrity lipid transport subunit YebS | - |
| KFD69_RS12895 () | 2649907..2652540 | + | 2634 | WP_001529852.1 | hypothetical protein | VF |
| KFD69_RS12900 () | 2652618..2654057 | + | 1440 | WP_001531515.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| KFD69_RS12905 () | 2654175..2654411 | + | 237 | WP_024131108.1 | YebV family protein | - |
| KFD69_RS12910 () | 2654522..2654713 | + | 192 | WP_000457838.1 | DUF1482 family protein | - |
| KFD69_RS12915 () | 2654732..2655382 | - | 651 | WP_000986173.1 | protein-serine/threonine phosphatase | - |
| KFD69_RS12920 () | 2655606..2655770 | - | 165 | WP_001134856.1 | membrane protein | - |
| KFD69_RS12925 () | 2656055..2656777 | - | 723 | WP_000182071.1 | hypothetical protein | VF |
| KFD69_RS12930 () | 2657461..2657856 | + | 396 | WP_000422882.1 | DUF1398 domain-containing protein | - |
| KFD69_RS12935 () | 2658186..2658662 | + | 477 | WP_000030934.1 | hypothetical protein | - |
| KFD69_RS12940 () | 2659035..2659454 | - | 420 | WP_001025515.1 | GNAT family N-acetyltransferase | - |
| KFD69_RS12945 () | 2659827..2660096 | + | 270 | WP_001576019.1 | hypothetical protein | - |
| KFD69_RS12950 () | 2660262..2660402 | + | 141 | WP_001576018.1 | hypothetical protein | - |
| KFD69_RS12955 () | 2660548..2661755 | - | 1208 | Protein_2549 | IS256 family transposase ISEc39 | Transposase |
| KFD69_RS12960 () | 2661825..2662291 | + | 467 | Protein_2550 | tyrosine-type recombinase/integrase | - |
| KFD69_RS12965 () | 2663541..2664455 | + | 915 | WP_001233445.1 | DMT family transporter | - |
| KFD69_RS12970 () | 2664588..2664746 | + | 159 | WP_000480735.1 | DUF5993 family protein | - |
| KFD69_RS12975 () | 2664756..2665370 | + | 615 | WP_000848072.1 | disulfide bond formation protein B | - |
| KFD69_RS23830 () | 2665697..2665864 | - | 168 | WP_001751917.1 | helix-turn-helix domain-containing protein | - |
| KFD69_RS24015 () | 2665858..2666004 | + | 147 | WP_000951652.1 | hypothetical protein | - |
| KFD69_RS12990 () | 2666505..2666630 | - | 126 | WP_000457876.1 | hypothetical protein | - |
| KFD69_RS23835 () | 2666630..2666810 | + | 181 | Protein_2557 | IS3 family transposase | - |
| KFD69_RS12995 () | 2667200..2667400 | + | 201 | WP_012543349.1 | PagK family vesicle-borne virulence factor | - |
| KFD69_RS23840 () | 2667497..2668008 | - | 512 | Protein_2559 | tail fiber assembly protein | - |
| KFD69_RS23845 () | 2668021..2668308 | - | 288 | Protein_2560 | macro domain-containing protein | - |
| KFD69_RS23850 () | 2668318..2669549 | - | 1232 | Protein_2561 | tail fiber protein | - |
| KFD69_RS13005 () | 2669548..2670115 | - | 568 | Protein_2562 | phage terminase large subunit family protein | - |
| KFD69_RS13010 () | 2670102..2670593 | - | 492 | WP_000348541.1 | DUF1441 family protein | - |
| KFD69_RS13015 () | 2670648..2670836 | + | 189 | WP_001576014.1 | hypothetical protein | - |
| KFD69_RS13020 () | 2670901..2671068 | + | 168 | WP_000789530.1 | lytic enzyme | - |
| KFD69_RS13025 () | 2671325..2671858 | - | 534 | WP_001050883.1 | DUF2514 domain-containing protein | - |
| KFD69_RS13030 () | 2671912..2672103 | - | 192 | Protein_2567 | glycoside hydrolase family 19 protein | - |
| KFD69_RS23855 () | 2672092..2672553 | + | 462 | Protein_2568 | DNA breaking-rejoining protein | - |
| KFD69_RS13040 () | 2672817..2673739 | + | 923 | Protein_2569 | hypothetical protein ; Integrase | Integrase |
| KFD69_RS13045 () | 2674684..2675484 | + | 801 | WP_001536069.1 | hypothetical protein | - |
| KFD69_RS13050 () | 2675513..2675754 | - | 242 | Protein_2571 | recombinase family protein | - |
| KFD69_RS13055 () | 2675964..2676686 | + | 723 | WP_000161704.1 | hypothetical protein | VF |
| KFD69_RS13060 () | 2676888..2677232 | - | 345 | Protein_2573 | tail fiber assembly protein | - |
| KFD69_RS13065 () | 2677237..2678100 | - | 864 | WP_072100756.1 | DUF1983 domain-containing protein | - |
| KFD69_RS13070 () | 2678140..2680471 | - | 2332 | Protein_2575 | host specificity protein J | - |
| KFD69_RS13075 () | 2680471..2680731 | - | 261 | Protein_2576 | C40 family peptidase | - |
| KFD69_RS13080 () | 2680741..2681436 | - | 696 | WP_001152416.1 | phage minor tail protein L | - |
| KFD69_RS13085 () | 2681526..2682059 | + | 534 | WP_000877926.1 | hypothetical protein | VF |
| KFD69_RS13090 () | 2682176..2682355 | - | 180 | WP_000578541.1 | Ail/Lom family outer membrane beta-barrel protein | - |
| KFD69_RS13095 () | 2682435..2682746 | - | 312 | Protein_2580 | DUF1441 family protein | - |
| KFD69_RS13100 () | 2682954..2683433 | - | 480 | WP_001541990.1 | lysis protein | - |
| KFD69_RS13105 () | 2683451..2683903 | - | 453 | WP_000984586.1 | glycoside hydrolase family protein | - |
| KFD69_RS13110 () | 2683887..2684216 | - | 330 | WP_001574216.1 | phage holin, lambda family | - |
| KFD69_RS13115 () | 2684492..2685178 | + | 687 | WP_001574215.1 | type III secretion system effector protease GtgA | - |
| KFD69_RS13120 () | 2685539..2685988 | + | 450 | WP_000798708.1 | hypothetical protein | - |
| KFD69_RS13125 () | 2686362..2686889 | - | 528 | WP_000971762.1 | hypothetical protein | - |
| KFD69_RS13130 () | 2686983..2687672 | - | 690 | WP_001097218.1 | bacteriophage antitermination protein Q | - |
| KFD69_RS13135 () | 2687669..2687805 | - | 137 | Protein_2588 | YlcG family protein | - |
| KFD69_RS23860 () | 2687802..2687942 | - | 141 | Protein_2589 | recombination protein NinG | - |
| KFD69_RS13145 () | 2688026..2688625 | - | 600 | WP_000940753.1 | DUF1367 family protein | - |
| KFD69_RS13150 () | 2688689..2688907 | - | 219 | WP_001524708.1 | hypothetical protein | - |
| KFD69_RS23865 () | 2689209..2689307 | - | 99 | WP_223151200.1 | hypothetical protein | - |
| KFD69_RS13160 () | 2689626..2691605 | - | 1980 | WP_001237395.1 | alkyl sulfatase dimerization domain-containing protein | - |
| KFD69_RS13165 () | 2692019..2692297 | + | 279 | WP_001575998.1 | excisionase | - |
| KFD69_RS13170 () | 2692272..2693351 | + | 1080 | WP_000087636.1 | hypothetical protein ; Integrase | Integrase |
| - | 2693489..2693634 | + | 146 | - | - | Antitoxin Detail |
| - | 2693491..2693594 | - | 104 | - | - | Toxin Detail |
| KFD69_RS13175 () | 2693734..2694087 | - | 354 | WP_000722370.1 | YebY family protein | - |
| KFD69_RS13180 () | 2694104..2694979 | - | 876 | WP_000979694.1 | copper homeostasis membrane protein CopD | - |
| KFD69_RS13185 () | 2694980..2695354 | - | 375 | WP_000168393.1 | CopC domain-containing protein YobA | - |
| KFD69_RS13190 () | 2695492..2695722 | + | 231 | WP_000856224.1 | DNA polymerase III subunit theta | - |
| KFD69_RS13195 () | 2695830..2696486 | + | 657 | WP_000100257.1 | carbon-nitrogen hydrolase family protein | - |
| KFD69_RS13200 () | 2696510..2697208 | + | 699 | WP_000944288.1 | exodeoxyribonuclease X | - |
| KFD69_RS13205 () | 2697245..2699296 | - | 2052 | WP_000936990.1 | oligopeptidase B | - |
| KFD69_RS13210 () | 2699509..2700168 | - | 660 | WP_000024715.1 | tellurite resistance TerB family protein | - |
| KFD69_RS13215 () | 2700262..2700615 | - | 354 | WP_001042123.1 | protein YebF | - |
| KFD69_RS13220 () | 2700683..2700973 | - | 291 | WP_000257723.1 | DNA damage-inducible protein YebG | - |
| KFD69_RS13225 () | 2701104..2702282 | + | 1179 | WP_000173418.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| KFD69_RS13230 () | 2702382..2703023 | - | 642 | WP_000800494.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| KFD69_RS13235 () | 2703061..2704872 | - | 1812 | WP_001069113.1 | phosphogluconate dehydratase | - |
| KFD69_RS13240 () | 2705107..2706582 | - | 1476 | WP_000301711.1 | glucose-6-phosphate dehydrogenase | - |
| KFD69_RS13245 () | 2706924..2707793 | + | 870 | WP_001056720.1 | MurR/RpiR family transcriptional regulator | - |
| KFD69_RS13250 () | 2707917..2709359 | + | 1443 | WP_000091156.1 | pyruvate kinase | - |
| KFD69_RS13255 () | 2709432..2710403 | - | 972 | WP_000448401.1 | Lipid A biosynthesis myristoyltransferase | VF |
| KFD69_RS13260 () | 2710520..2711839 | - | 1320 | WP_001184028.1 | murein DD-endopeptidase MepM | - |
| KFD69_RS13265 () | 2711855..2712799 | - | 945 | WP_213630792.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| KFD69_RS13270 () | 2712878..2713633 | + | 756 | WP_000203023.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| KFD69_RS13275 () | 2713630..2714415 | + | 786 | WP_000571508.1 | hypothetical protein | VF |
| KFD69_RS13280 () | 2714494..2715504 | - | 1011 | WP_000568508.1 | Holliday junction ATP-dependent DNA helicase RuvB | VF |
| KFD69_RS13285 () | 2715513..2716124 | - | 612 | WP_000580335.1 | Holliday junction branch migration protein RuvA | - |
| KFD69_RS13290 () | 2716484..2717176 | - | 693 | WP_001680382.1 | hypothetical protein | - |
| KFD69_RS13295 () | 2717385..2717984 | + | 600 | WP_000716756.1 | YebB family permuted papain-like enzyme | - |
| KFD69_RS13300 () | 2717986..2718507 | - | 522 | WP_000022509.1 | crossover junction endodeoxyribonuclease RuvC | - |
| KFD69_RS13305 () | 2718544..2719284 | - | 741 | WP_000907242.1 | YebC/PmpR family DNA-binding transcriptional regulator | - |
| KFD69_RS13310 () | 2719314..2719766 | - | 453 | WP_000653693.1 | dihydroneopterin triphosphate diphosphatase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|