MGE detailed information
MGE type: Conjugative plasmid MGE length: 114761 bp
Accession: NZ_CP074141 Location: 1..114761 Organism: Serratia sp. JSRIV004 Replicon: plasmid pJSRIV004_1
Accession: NZ_CP074141 Location: 1..114761 Organism: Serratia sp. JSRIV004 Replicon: plasmid pJSRIV004_1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KGP21_RS28875 (KGP21_28780) | 236..550 | - | 315 | WP_223498410.1 | hypothetical protein | - |
| KGP21_RS28880 (KGP21_28785) | 564..896 | - | 333 | WP_223498409.1 | endoribonuclease MazF | Toxin Detail |
| KGP21_RS28885 (KGP21_28790) | 896..1141 | - | 246 | WP_223498408.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| KGP21_RS28890 (KGP21_28795) | 1309..1515 | - | 207 | WP_223498407.1 | hypothetical protein | - |
| KGP21_RS28895 (KGP21_28800) | 1673..1903 | - | 231 | WP_223498406.1 | hypothetical protein | - |
| KGP21_RS28900 (KGP21_28805) | 1900..2223 | - | 324 | WP_223498405.1 | hypothetical protein | - |
| KGP21_RS28905 (KGP21_28810) | 2246..2485 | - | 240 | WP_223498404.1 | helix-turn-helix domain-containing protein | - |
| KGP21_RS28910 (KGP21_28815) | 2747..3241 | - | 495 | WP_223498403.1 | hypothetical protein | - |
| KGP21_RS28915 (KGP21_28820) | 3470..4297 | - | 828 | WP_223498402.1 | phosphoenolpyruvate hydrolase family protein | - |
| KGP21_RS28920 (KGP21_28825) | 4294..4770 | - | 477 | Protein_9 | Tm-1-like ATP-binding domain-containing protein | - |
| KGP21_RS28925 (KGP21_28830) | 4833..5528 | - | 696 | WP_223498400.1 | IS6 family transposase ISEas1 | Transposase |
| KGP21_RS28930 (KGP21_28835) | 5967..7088 | + | 1122 | Protein_11 | AAA family ATPase | - |
| KGP21_RS28935 (KGP21_28840) | 7134..8093 | - | 960 | WP_223498399.1 | Recombination-promoting nuclease RpnA | VF |
| KGP21_RS28940 (KGP21_28845) | 8495..9190 | + | 696 | WP_223498400.1 | IS6 family transposase ISEas1 | Transposase |
| KGP21_RS28945 | 9311..9520 | + | 210 | Protein_14 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| KGP21_RS28950 (KGP21_28855) | 9726..11858 | - | 2133 | WP_223499784.1 | TonB-dependent receptor | - |
| KGP21_RS28955 (KGP21_28860) | 12011..12499 | - | 489 | WP_223499785.1 | DUF2946 domain-containing protein | - |
| KGP21_RS28960 (KGP21_28865) | 12831..12944 | - | 114 | Protein_17 | IS6 family transposase | - |
| KGP21_RS28965 (KGP21_28870) | 12992..13687 | - | 696 | WP_223498400.1 | IS6 family transposase ISEas1 | Transposase |
| KGP21_RS28970 (KGP21_28875) | 14089..15048 | + | 960 | WP_223498399.1 | Recombination-promoting nuclease RpnA | VF |
| KGP21_RS28975 (KGP21_28880) | 15239..15934 | + | 696 | WP_223498400.1 | IS6 family transposase ISEas1 | Transposase |
| KGP21_RS28980 (KGP21_28885) | 15972..16493 | - | 522 | WP_223499782.1 | IS3 family transposase ISAs9 | Transposase |
| KGP21_RS28985 | 16631..17143 | - | 513 | WP_223499781.1 | IS3 family transposase ISPa31 | Transposase |
| KGP21_RS28990 (KGP21_28895) | 17690..17857 | - | 168 | Protein_23 | IS3 family transposase ISBcen15 | Transposase |
| KGP21_RS28995 (KGP21_28900) | 18008..18868 | + | 861 | WP_223499780.1 | class I SAM-dependent methyltransferase | - |
| KGP21_RS29000 (KGP21_28905) | 18935..19630 | - | 696 | WP_223499779.1 | IS6 family transposase ISEas1 | Transposase |
| KGP21_RS29005 (KGP21_28910) | 20480..21280 | + | 801 | WP_223499828.1 | IS91 family transposase ISMno23 | Transposase |
| KGP21_RS29010 (KGP21_28915) | 21530..21817 | - | 288 | WP_223499778.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| KGP21_RS29015 (KGP21_28920) | 21807..22049 | - | 243 | WP_223499777.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| KGP21_RS29020 (KGP21_28925) | 22352..23545 | + | 1194 | WP_223499776.1 | AAA family ATPase | - |
| KGP21_RS29025 (KGP21_28930) | 23554..24525 | + | 972 | WP_223499775.1 | ParB family protein | - |
| KGP21_RS29030 (KGP21_28935) | 25098..25832 | + | 735 | WP_223499774.1 | N-6 DNA methylase | - |
| KGP21_RS29035 (KGP21_28940) | 25757..26362 | + | 606 | WP_223499773.1 | IS66 family transposase ISCro1 | Transposase |
| KGP21_RS29040 (KGP21_28945) | 26359..26706 | + | 348 | WP_223499772.1 | IS66 family transposase ISCro1 | Transposase |
| KGP21_RS29045 (KGP21_28950) | 26726..28297 | + | 1572 | WP_223499771.1 | IS66 family transposase ISCro1 | Transposase |
| KGP21_RS29050 (KGP21_28955) | 28347..28991 | + | 645 | WP_223499770.1 | hypothetical protein | - |
| KGP21_RS29055 (KGP21_28960) | 29176..29385 | - | 210 | WP_223499769.1 | hypothetical protein | - |
| KGP21_RS29060 (KGP21_28965) | 29384..29812 | + | 429 | WP_223499768.1 | antirestriction protein | - |
| KGP21_RS29065 (KGP21_28970) | 29893..30150 | + | 258 | WP_223499767.1 | hypothetical protein | - |
| KGP21_RS29070 | 30381..30597 | - | 217 | Protein_39 | hypothetical protein | - |
| KGP21_RS29075 (KGP21_28975) | 31138..31617 | + | 480 | WP_223499766.1 | DNA repair protein RadC | - |
| KGP21_RS29080 (KGP21_28980) | 31659..31934 | + | 276 | WP_223499765.1 | homeobox domain-containing protein | - |
| KGP21_RS29085 (KGP21_28985) | 32182..32868 | + | 687 | WP_223499764.1 | PspA/IM30 family protein | - |
| KGP21_RS29090 (KGP21_28990) | 32858..33367 | + | 510 | WP_223499763.1 | hypothetical protein | - |
| KGP21_RS29095 (KGP21_28995) | 33409..33876 | + | 468 | WP_223499762.1 | hypothetical protein | - |
| KGP21_RS29100 (KGP21_29000) | 33873..34193 | + | 321 | WP_223499761.1 | hypothetical protein | - |
| KGP21_RS29105 (KGP21_29005) | 34345..34815 | + | 471 | WP_223499760.1 | hypothetical protein | - |
| KGP21_RS29110 (KGP21_29010) | 34975..35313 | + | 339 | WP_223499759.1 | hypothetical protein | - |
| KGP21_RS29115 (KGP21_29015) | 35362..36210 | + | 849 | WP_223499758.1 | ParA family protein | - |
| KGP21_RS29120 (KGP21_29020) | 36213..37541 | + | 1329 | WP_223499757.1 | ParB/RepB/Spo0J family partition protein | - |
| KGP21_RS29125 (KGP21_29025) | 37542..37991 | + | 450 | WP_223499756.1 | hypothetical protein | - |
| KGP21_RS29130 (KGP21_29030) | 37988..38308 | + | 321 | WP_223499755.1 | hypothetical protein | - |
| KGP21_RS29135 (KGP21_29035) | 38351..38614 | + | 264 | WP_223499754.1 | hypothetical protein | - |
| KGP21_RS29140 (KGP21_29040) | 38875..39081 | + | 207 | WP_223499753.1 | hypothetical protein | - |
| KGP21_RS29145 (KGP21_29045) | 39126..39479 | + | 354 | WP_223499752.1 | DUF1870 family protein | - |
| KGP21_RS29150 (KGP21_29050) | 39494..41584 | + | 2091 | WP_223499751.1 | DEAD/DEAH box helicase | - |
| KGP21_RS29155 (KGP21_29055) | 41955..42260 | + | 306 | WP_223499750.1 | hypothetical protein | - |
| KGP21_RS29160 (KGP21_29060) | 42379..42702 | + | 324 | WP_059202210.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| KGP21_RS29165 (KGP21_29065) | 42689..42970 | + | 282 | WP_223499749.1 | helix-turn-helix transcriptional regulator | - |
| KGP21_RS29170 (KGP21_29070) | 43387..43929 | - | 543 | WP_223499748.1 | hypothetical protein | - |
| KGP21_RS29175 (KGP21_29075) | 43926..45057 | - | 1132 | Protein_60 | translesion error-prone DNA polymerase V subunit UmuC | - |
| KGP21_RS29180 (KGP21_29080) | 45119..46126 | + | 1008 | WP_223538568.1 | Tyrosine recombinase XerC | VF |
| KGP21_RS29185 (KGP21_29085) | 46110..48320 | + | 2211 | WP_223538569.1 | tyrosine-type recombinase/integrase | - |
| KGP21_RS29190 (KGP21_29090) | 48391..48867 | - | 477 | WP_223538570.1 | hypothetical protein | - |
| KGP21_RS29195 (KGP21_29095) | 48910..49770 | - | 861 | WP_223538571.1 | WYL domain-containing protein | - |
| KGP21_RS29200 (KGP21_29100) | 49906..51087 | + | 1182 | WP_223538572.1 | metallohydrolase | - |
| KGP21_RS29205 (KGP21_29105) | 51084..53312 | + | 2229 | WP_223538573.1 | Mov34/MPN/PAD-1 family protein | - |
| KGP21_RS29210 (KGP21_29110) | 53360..53485 | - | 126 | Protein_67 | ImpB/MucB/SamB family protein | - |
| KGP21_RS29215 (KGP21_29115) | 53497..53919 | - | 423 | WP_223499747.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| KGP21_RS29220 (KGP21_29120) | 54336..54494 | + | 159 | WP_223499746.1 | hypothetical protein | - |
| KGP21_RS29225 (KGP21_29125) | 54499..55074 | - | 576 | WP_223499745.1 | hypothetical protein | - |
| KGP21_RS29230 (KGP21_29130) | 55775..57151 | + | 1377 | WP_223499824.1 | DUF3560 domain-containing protein | - |
| KGP21_RS29235 (KGP21_29135) | 57197..57772 | + | 576 | WP_223499823.1 | methyltransferase | - |
| KGP21_RS29240 (KGP21_29140) | 58720..59277 | + | 558 | WP_223499822.1 | single-stranded DNA-binding protein | - |
| KGP21_RS29245 (KGP21_29145) | 59333..59542 | + | 210 | WP_223499821.1 | DUF905 family protein | - |
| KGP21_RS29250 (KGP21_29150) | 59696..61663 | + | 1968 | WP_223499820.1 | ParB/RepB/Spo0J family partition protein | - |
| KGP21_RS29255 (KGP21_29155) | 61703..62053 | + | 351 | WP_223499819.1 | conjugation system SOS inhibitor PsiB family protein | - |
| KGP21_RS29260 (KGP21_29160) | 62050..62370 | + | 321 | WP_223499818.1 | theronine dehydrogenase | - |
| KGP21_RS29265 (KGP21_29165) | 62472..62678 | + | 207 | WP_115160158.1 | hypothetical protein | - |
| KGP21_RS29270 (KGP21_29170) | 63369..63803 | + | 435 | WP_223499817.1 | hypothetical protein | - |
| KGP21_RS29275 (KGP21_29175) | 63847..64092 | + | 246 | WP_223499816.1 | hypothetical protein | - |
| KGP21_RS29280 (KGP21_29180) | 64185..65006 | + | 822 | WP_223499827.1 | N-6 DNA methylase | - |
| KGP21_RS29285 (KGP21_29185) | 65133..65435 | + | 303 | WP_050313120.1 | type II toxin-antitoxin system HigB family toxin | - |
| KGP21_RS29290 (KGP21_29190) | 65440..65799 | + | 360 | WP_050313121.1 | transcriptional regulator | - |
| KGP21_RS29295 (KGP21_29195) | 66540..66908 | + | 369 | WP_223499815.1 | hypothetical protein | - |
| KGP21_RS29300 (KGP21_29200) | 66968..67315 | + | 348 | WP_223499814.1 | hypothetical protein | - |
| KGP21_RS29305 (KGP21_29205) | 67410..67664 | + | 255 | WP_223499826.1 | hypothetical protein | - |
| KGP21_RS29310 (KGP21_29210) | 67711..67878 | - | 168 | WP_223499813.1 | hypothetical protein | - |
| KGP21_RS29315 (KGP21_29215) | 67910..68170 | - | 261 | WP_223499812.1 | hypothetical protein | - |
| KGP21_RS29320 (KGP21_29220) | 68431..69096 | + | 666 | WP_223499811.1 | hypothetical protein | - |
| KGP21_RS29325 (KGP21_29225) | 69162..70025 | + | 864 | WP_223538560.1 | hypothetical protein | - |
| KGP21_RS29330 (KGP21_29230) | 70417..70899 | - | 483 | WP_223499808.1 | hypothetical protein | VF |
| KGP21_RS29335 (KGP21_29235) | 71321..71716 | + | 396 | WP_223499807.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| KGP21_RS29340 (KGP21_29240) | 71954..72733 | - | 780 | WP_223499806.1 | helix-turn-helix domain-containing protein | - |
| KGP21_RS29345 (KGP21_29245) | 73029..73187 | + | 159 | WP_223538575.1 | TraY domain-containing protein | - |
| KGP21_RS29350 (KGP21_29250) | 73440..73769 | + | 330 | WP_245398332.1 | TraY domain-containing protein | - |
| KGP21_RS29355 (KGP21_29255) | 73834..74184 | + | 351 | WP_223499803.1 | type IV conjugative transfer system pilin TraA | - |
| KGP21_RS29360 (KGP21_29260) | 74334..74639 | + | 306 | WP_065684418.1 | type IV conjugative transfer system protein TraL | - |
| KGP21_RS29365 (KGP21_29265) | 74654..75220 | + | 567 | WP_223499802.1 | type IV conjugative transfer system protein TraE | - |
| KGP21_RS29370 (KGP21_29270) | 75207..75863 | + | 657 | WP_223499829.1 | hypothetical protein | - |
| KGP21_RS29375 (KGP21_29275) | 75863..81109 | + | 5247 | WP_223499801.1 | Multifunctional conjugation protein TraI | Relaxase |
| KGP21_RS29380 (KGP21_29280) | 81111..81848 | + | 738 | WP_223499800.1 | type-F conjugative transfer system pilin acetylase TraX | - |
| KGP21_RS29385 (KGP21_29285) | 82062..82529 | + | 468 | WP_223538561.1 | Phospholipase D | VF |
| KGP21_RS29390 (KGP21_29290) | 82675..82941 | + | 267 | WP_115160188.1 | replication regulatory protein RepA | - |
| KGP21_RS29395 (KGP21_29295) | 83358..84296 | + | 939 | WP_223499825.1 | Replication protein | - |
| KGP21_RS29400 (KGP21_29300) | 85289..85783 | + | 495 | WP_223499798.1 | GNAT family N-acetyltransferase | - |
| KGP21_RS29405 (KGP21_29305) | 85928..86185 | + | 258 | Protein_106 | IS3 family transposase ISBcen15 | Transposase |
| KGP21_RS29410 (KGP21_29310) | 86237..86515 | + | 279 | Protein_107 | IS6 family transposase ISYps1 | Transposase |
| KGP21_RS29415 (KGP21_29315) | 86601..89609 | - | 3009 | WP_223538562.1 | Tn3 family transposase TnpA_Tn3 | Transposase |
| KGP21_RS29420 (KGP21_29320) | 89659..90219 | - | 561 | WP_223538563.1 | Tn3 family transposase TnpR_TnAs2 | Transposase |
| KGP21_RS29425 (KGP21_29325) | 90432..90866 | + | 435 | WP_223538564.1 | DUF6530 family protein | - |
| KGP21_RS29430 (KGP21_29330) | 90913..91803 | + | 891 | WP_223538565.1 | hypothetical protein | - |
| KGP21_RS29435 (KGP21_29335) | 91904..92701 | + | 798 | WP_223538566.1 | hypothetical protein | - |
| KGP21_RS29440 (KGP21_29340) | 92879..93301 | + | 423 | Protein_113 | IS6 family transposase ISEas1 | Transposase |
| KGP21_RS29445 (KGP21_29345) | 93357..93467 | + | 111 | Protein_114 | IS6 family transposase ISYps1 | Transposase |
| KGP21_RS29450 (KGP21_29350) | 93505..94479 | - | 975 | WP_223498416.1 | IS30 family transposase IS4351 | Transposase |
| KGP21_RS29455 (KGP21_29355) | 94570..95076 | - | 507 | Protein_116 | IS6 family transposase ISYps1 | Transposase |
| KGP21_RS29460 (KGP21_29360) | 95213..96373 | - | 1161 | WP_223498415.1 | chromate efflux transporter | - |
| KGP21_RS29465 (KGP21_29365) | 96370..97188 | - | 819 | WP_223538567.1 | 3'(2'),5'-bisphosphate nucleotidase CysQ | - |
| KGP21_RS29470 (KGP21_29370) | 97237..98247 | - | 1011 | WP_223498414.1 | sulfotransferase | - |
| KGP21_RS29475 (KGP21_29375) | 98461..99255 | - | 795 | WP_223498413.1 | sulfite exporter TauE/SafE family protein | - |
| KGP21_RS29480 (KGP21_29380) | 99596..101254 | - | 1659 | WP_223498412.1 | bifunctional sulfate adenylyltransferase/adenylylsulfate kinase | - |
| KGP21_RS29485 (KGP21_29385) | 101535..103040 | + | 1506 | Protein_122 | IS3 family transposase | - |
| KGP21_RS29490 (KGP21_29390) | 103078..103314 | + | 237 | Protein_123 | IS91 family transposase ISVa3 | Transposase |
| KGP21_RS29495 (KGP21_29395) | 103664..104638 | - | 975 | WP_223498393.1 | Type 1 fimbrin D-mannose specific adhesin | VF |
| KGP21_RS29500 (KGP21_29400) | 104662..105174 | - | 513 | WP_223498392.1 | Protein FimG | VF |
| KGP21_RS29505 (KGP21_29405) | 105188..105718 | - | 531 | WP_223501722.1 | Protein FimF | VF |
| KGP21_RS29510 (KGP21_29410) | 105724..108309 | - | 2586 | WP_029712213.1 | Outer membrane usher protein FimD | VF |
| KGP21_RS29515 (KGP21_29415) | 108446..109090 | - | 645 | WP_223538576.1 | Chaperone protein FimC | VF |
| KGP21_RS29520 (KGP21_29420) | 109243..109785 | - | 543 | WP_024531355.1 | putative major fimbrial subunit LpfA | VF |
| KGP21_RS29525 (KGP21_29425) | 109854..110423 | - | 570 | WP_223498391.1 | Fimbrial subunit type 1 | VF |
| KGP21_RS29530 (KGP21_29430) | 110926..111321 | - | 396 | WP_223498390.1 | hypothetical protein | - |
| KGP21_RS29535 (KGP21_29435) | 111852..112693 | - | 842 | Protein_132 | ISKra4 family transposase ISKpn19 | Transposase |
| KGP21_RS29540 (KGP21_29440) | 112873..113418 | - | 546 | WP_245398329.1 | plasmid pRiA4b ORF-3 family protein | - |
| KGP21_RS29545 (KGP21_29445) | 114303..114473 | - | 171 | WP_223498411.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|