MGE detailed information
MGE type: Prophage MGE length: 78811 bp
Accession: NZ_CP073932 Location: 1053464..1132274 Organism: Escherichia coli strain MB57 Replicon: chromosome
Accession: NZ_CP073932 Location: 1053464..1132274 Organism: Escherichia coli strain MB57 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KFU62_RS05065 (1049197) | 1049197..1050330 | - | 1134 | WP_000064752.1 | NADH:flavorubredoxin reductase NorW | - |
| KFU62_RS05070 (1050327) | 1050327..1051766 | - | 1440 | WP_000029634.1 | anaerobic nitric oxide reductase flavorubredoxin | - |
| KFU62_RS05075 (1051953) | 1051953..1053467 | + | 1515 | WP_000010749.1 | nitric oxide reductase transcriptional regulator NorR | - |
| KFU62_RS05080 (1053464) | 1053464..1054429 | - | 966 | WP_001287420.1 | hypothetical protein | VF |
| KFU62_RS05085 (1054422) | 1054422..1055195 | - | 774 | WP_000804550.1 | glucitol operon DNA-binding transcriptional repressor SrlR | - |
| KFU62_RS05090 (1055262) | 1055262..1055621 | - | 360 | WP_000252908.1 | transcriptional regulator GutM | - |
| KFU62_RS05095 (1055726) | 1055726..1056505 | - | 780 | WP_001077358.1 | sorbitol-6-phosphate dehydrogenase | - |
| KFU62_RS05100 (1056509) | 1056509..1056880 | - | 372 | WP_000216194.1 | PTS glucitol/sorbitol transporter subunit IIA | - |
| KFU62_RS05105 (1056891) | 1056891..1057850 | - | 960 | WP_000148878.1 | PTS glucitol/sorbitol transporter subunit IIB | - |
| KFU62_RS05110 (1057847) | 1057847..1058410 | - | 564 | WP_000573321.1 | PTS glucitol/sorbitol transporter subunit IIC | - |
| KFU62_RS05115 (1058666) | 1058666..1059751 | + | 1086 | WP_001295177.1 | lytic murein transglycosylase B | - |
| KFU62_RS05120 (1059895) | 1059895..1060392 | + | 498 | WP_000132231.1 | nicotinamide-nucleotide amidase | - |
| KFU62_RS05125 (1060472) | 1060472..1061533 | + | 1062 | WP_000963143.1 | recombinase RecA | - |
| KFU62_RS05130 (1061602) | 1061602..1062102 | + | 501 | WP_000140508.1 | recombination regulator RecX | - |
| KFU62_RS05135 (1062230) | 1062230..1064860 | + | 2631 | WP_000047184.1 | alanine--tRNA ligase | - |
| KFU62_RS05140 (1065095) | 1065095..1065280 | + | 186 | WP_000906486.1 | carbon storage regulator CsrA | - |
| KFU62_RS05170 (1066738) | 1066738..1067304 | + | 567 | WP_000273290.1 | fructose-1-phosphate/6-phosphogluconate phosphatase | - |
| KFU62_RS05175 (1067301) | 1067301..1067729 | + | 429 | WP_001287454.1 | YqaA family protein | - |
| KFU62_RS05180 (1067802) | 1067802..1069358 | + | 1557 | WP_000611804.1 | glutamate--cysteine ligase | - |
| KFU62_RS05185 (1069508) | 1069508..1070023 | + | 516 | WP_001130211.1 | hypothetical protein | VF |
| KFU62_RS05190 (1070087) | 1070087..1071625 | - | 1539 | WP_001295176.1 | hypothetical protein | VF |
| KFU62_RS05195 (1071642) | 1071642..1072814 | - | 1173 | WP_001326681.1 | hypothetical protein | VF |
| KFU62_RS05200 (1072941) | 1072941..1073471 | - | 531 | WP_000378447.1 | hypothetical protein | VF |
| KFU62_RS05205 (1073562) | 1073562..1073897 | - | 336 | WP_000119763.1 | L-valine transporter subunit YgaH | - |
| KFU62_RS05210 (1073887) | 1073887..1074624 | - | 738 | WP_000445651.1 | L-valine exporter subunit YgaZ | - |
| KFU62_RS05215 (1074748) | 1074748..1075932 | - | 1185 | WP_000165680.1 | MFS transporter | - |
| KFU62_RS05220 (1076124) | 1076124..1077116 | - | 993 | WP_001216525.1 | glycine betaine/L-proline ABC transporter substrate-binding protein ProX | - |
| KFU62_RS05225 (1077174) | 1077174..1078238 | - | 1065 | WP_000774988.1 | glycine betaine/L-proline ABC transporter permease ProW | - |
| KFU62_RS05230 (1078231) | 1078231..1079433 | - | 1203 | WP_000985494.1 | hypothetical protein | VF |
| KFU62_RS05235 (1079787) | 1079787..1080746 | - | 960 | WP_000777969.1 | class 1b ribonucleoside-diphosphate reductase subunit beta | - |
| KFU62_RS05240 (1080756) | 1080756..1082900 | - | 2145 | WP_000246527.1 | class 1b ribonucleoside-diphosphate reductase subunit alpha | - |
| KFU62_RS05245 (1082873) | 1082873..1083283 | - | 411 | WP_000080947.1 | class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI | - |
| KFU62_RS05250 (1083280) | 1083280..1083525 | - | 246 | WP_001223227.1 | glutaredoxin-like protein NrdH | - |
| KFU62_RS05255 (1083773) | 1083773..1084102 | - | 330 | WP_001295174.1 | DUF883 domain-containing protein | - |
| KFU62_RS05260 (1084254) | 1084254..1084598 | + | 345 | WP_000281320.1 | DUF2002 family protein | - |
| KFU62_RS05265 (1084635) | 1084635..1085084 | - | 450 | WP_000492656.1 | L-alanine exporter AlaE | - |
| KFU62_RS05270 (1085753) | 1085753..1086157 | + | 405 | WP_000115383.1 | DNA-binding protein StpA | - |
| KFU62_RS05275 (1086204) | 1086204..1086728 | - | 525 | WP_001229442.1 | thiosulfate sulfurtransferase YgaP | - |
| KFU62_RS05280 (1086738) | 1086738..1087037 | - | 300 | WP_000137280.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| KFU62_RS05285 (1087220) | 1087220..1087378 | + | 159 | WP_000508177.1 | YqaE/Pmp3 family membrane protein | - |
| KFU62_RS05290 (1087462) | 1087462..1087911 | + | 450 | WP_000522415.1 | potassium binding protein Kbp | - |
| KFU62_RS05295 (1087912) | 1087912..1088574 | - | 663 | WP_000156811.1 | DNA-binding transcriptional regulator CsiR | - |
| KFU62_RS05300 (1088595) | 1088595..1089995 | - | 1401 | WP_001333601.1 | GABA permease | - |
| KFU62_RS05305 (1090233) | 1090233..1091513 | - | 1281 | WP_001087611.1 | hypothetical protein | VF |
| KFU62_RS05310 (1091527) | 1091527..1092975 | - | 1449 | WP_000772833.1 | NADP-dependent succinate-semialdehyde dehydrogenase | - |
| KFU62_RS05315 (1092998) | 1092998..1094266 | - | 1269 | WP_000271909.1 | L-2-hydroxyglutarate oxidase | - |
| KFU62_RS05320 (1094286) | 1094286..1095263 | - | 978 | WP_000993126.1 | glutarate dioxygenase GlaH | - |
| KFU62_RS05325 (1095812) | 1095812..1096509 | + | 698 | WP_103215986.1 | IS1 family transposase IS1R | Transposase |
| KFU62_RS05330 (1096526) | 1096526..1098628 | - | 2103 | Protein_1040 | alpha-amylase family protein | - |
| KFU62_RS05340 (1100014) | 1100014..1101387 | + | 1374 | Protein_1041 | DUF5507 domain-containing protein | - |
| KFU62_RS05345 (1101733) | 1101733..1101890 | + | 158 | Protein_1042 | recombinase family protein | - |
| KFU62_RS05350 (1102114) | 1102114..1102233 | + | 120 | WP_001120794.1 | hypothetical protein | - |
| KFU62_RS05355 (1102298) | 1102298..1106878 | + | 4581 | WP_001581967.1 | hypothetical protein | VF |
| KFU62_RS05360 (1107242) | 1107242..1107571 | - | 330 | WP_001194227.1 | TA system toxin CbtA family protein | Toxin Detail |
| KFU62_RS05365 (1107609) | 1107609..1107974 | - | 366 | WP_001059334.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| KFU62_RS05370 (1108000) | 1108000..1108221 | - | 222 | WP_000691984.1 | DUF987 domain-containing protein | - |
| KFU62_RS05375 (1108218) | 1108218..1108760 | - | 543 | WP_001098974.1 | DNA repair protein RadC | - |
| KFU62_RS05380 (1108773) | 1108773..1109216 | - | 444 | WP_000381004.1 | antirestriction protein | - |
| KFU62_RS05385 (1109247) | 1109247..1110068 | - | 822 | WP_001234410.1 | DUF932 domain-containing protein | - |
| KFU62_RS05390 (1110160) | 1110160..1110501 | - | 342 | WP_000720952.1 | hypothetical protein | - |
| KFU62_RS05395 (1110536) | 1110536..1111000 | - | 465 | WP_000791790.1 | hypothetical protein | - |
| KFU62_RS05400 (1111126) | 1111126..1111284 | - | 159 | WP_001128372.1 | hypothetical protein | - |
| KFU62_RS05405 (1111497) | 1111497..1112384 | - | 888 | WP_001567853.1 | 50S ribosome-binding GTPase | - |
| KFU62_RS05410 (1112699) | 1112699..1114156 | + | 1458 | WP_001154988.1 | YfjI family protein | - |
| KFU62_RS05415 (1114594) | 1114594..1115178 | + | 585 | WP_001164521.1 | inovirus Gp2 family protein | - |
| KFU62_RS05420 (1115249) | 1115249..1115971 | - | 723 | WP_000368574.1 | hypothetical protein | - |
| KFU62_RS05425 (1116086) | 1116086..1116313 | + | 228 | WP_000433435.1 | AlpA family phage regulatory protein | - |
| KFU62_RS05430 (1116741) | 1116741..1116956 | - | 216 | Protein_1059 | tyrosine-type recombinase/integrase | - |
| KFU62_RS05435 (1117274) | 1117274..1121056 | + | 3783 | WP_000532863.1 | hypothetical protein | - |
| KFU62_RS05440 (1121061) | 1121061..1125488 | + | 4428 | WP_001287788.1 | ATP-binding protein | - |
| KFU62_RS05445 (1125485) | 1125485..1126933 | + | 1449 | WP_000999054.1 | hypothetical protein | - |
| KFU62_RS05450 (1127060) | 1127060..1128757 | + | 1698 | WP_000077295.1 | hypothetical protein | - |
| KFU62_RS05460 (1129994) | 1129994..1130473 | - | 480 | WP_257198518.1 | hypothetical protein | - |
| KFU62_RS05465 (1131033) | 1131033..1132274 | - | 1242 | WP_000101724.1 | hypothetical protein ; Integrase | Integrase |
| KFU62_RS05475 (1133055) | 1133055..1133537 | - | 483 | WP_000162574.1 | SsrA-binding protein SmpB | - |
| KFU62_RS05480 (1133708) | 1133708..1134145 | + | 438 | WP_001300750.1 | type II toxin-antitoxin system toxin RatA | - |
| KFU62_RS05485 (1134135) | 1134135..1134425 | + | 291 | WP_001117838.1 | RnfH family protein | - |
| KFU62_RS05490 (1134487) | 1134487..1134828 | - | 342 | WP_001203437.1 | outer membrane protein assembly factor BamE | - |
| KFU62_RS05495 (1134977) | 1134977..1136638 | - | 1662 | WP_000880910.1 | DNA repair protein RecN | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|