MGE detailed information
MGE type: Genomic_island MGE length: 30720 bp
Accession: NZ_CP072687 Location: 4538517..4569236 Organism: Escherichia coli strain YP3 Replicon: chromosome
Accession: NZ_CP072687 Location: 4538517..4569236 Organism: Escherichia coli strain YP3 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| J8I95_RS21900 (4536056) | 4536056..4537822 | - | 1767 | WP_021537700.1 | ShlB/FhaC/HecB family hemolysin secretion/activation protein | - |
| J8I95_RS21905 (4538186) | 4538186..4538419 | - | 234 | WP_000124167.1 | hypothetical protein | - |
| J8I95_RS21910 (4538517) | 4538517..4539140 | - | 624 | WP_001260397.1 | hypothetical protein | - |
| J8I95_RS21915 (4539408) | 4539408..4539956 | - | 549 | WP_001534800.1 | hypothetical protein | - |
| J8I95_RS21920 (4540223) | 4540223..4540456 | - | 234 | WP_000958494.1 | AlpA family transcriptional regulator | - |
| J8I95_RS21925 (4540525) | 4540525..4541085 | - | 561 | WP_000991588.1 | hypothetical protein | - |
| J8I95_RS21930 (4541333) | 4541333..4541899 | - | 567 | WP_001126824.1 | inovirus-type Gp2 protein | - |
| J8I95_RS21935 (4543441) | 4543441..4545045 | - | 1605 | WP_001083418.1 | YfjI family protein | - |
| J8I95_RS21940 (4545345) | 4545345..4546127 | - | 783 | WP_001317493.1 | IS21 family transposase IS100kyp | Transposase |
| J8I95_RS21945 (4546124) | 4546124..4547146 | - | 1023 | WP_001546392.1 | IS21 family transposase IS100kyp | Transposase |
| J8I95_RS21950 (4547331) | 4547331..4548062 | - | 732 | WP_282489899.1 | inovirus Gp2 family protein | - |
| J8I95_RS21955 (4548732) | 4548732..4549262 | + | 531 | WP_000778605.1 | hypothetical protein | - |
| J8I95_RS21960 (4550426) | 4550426..4551649 | - | 1224 | Protein_4306 | hypothetical protein | - |
| J8I95_RS21965 (4551750) | 4551750..4552634 | + | 885 | WP_265750572.1 | YfjP family GTPase | - |
| J8I95_RS21970 (4552837) | 4552837..4553517 | + | 681 | WP_001282919.1 | WYL domain-containing protein | - |
| J8I95_RS21975 (4553665) | 4553665..4554342 | + | 678 | WP_001097301.1 | hypothetical protein | - |
| J8I95_RS21980 (4554348) | 4554348..4554581 | + | 234 | WP_001278287.1 | DUF905 family protein | - |
| J8I95_RS21985 (4554671) | 4554671..4555489 | + | 819 | WP_001175160.1 | DUF932 domain-containing protein | - |
| J8I95_RS21990 (4555580) | 4555580..4556065 | + | 486 | WP_000213697.1 | antirestriction protein | - |
| J8I95_RS21995 (4556080) | 4556080..4556556 | + | 477 | WP_001298074.1 | RadC family protein | - |
| J8I95_RS22000 (4556643) | 4556643..4556864 | + | 222 | WP_000692350.1 | DUF987 domain-containing protein | - |
| J8I95_RS22005 (4556944) | 4556944..4557312 | + | 369 | WP_001285575.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| J8I95_RS22010 (4557402) | 4557402..4557776 | + | 375 | WP_001468432.1 | TA system toxin CbtA family protein | Toxin Detail |
| J8I95_RS22015 (4557773) | 4557773..4558261 | + | 489 | WP_000777545.1 | DUF5983 family protein | - |
| J8I95_RS22020 (4558273) | 4558273..4558470 | + | 198 | WP_000839281.1 | DUF957 domain-containing protein | - |
| J8I95_RS22025 (4558567) | 4558567..4559136 | + | 570 | WP_001290252.1 | DUF4942 domain-containing protein | - |
| J8I95_RS22030 (4559885) | 4559885..4561423 | + | 1539 | WP_001187191.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| J8I95_RS22035 (4561789) | 4561789..4563123 | + | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| J8I95_RS22040 (4563203) | 4563203..4565350 | + | 2148 | WP_001296667.1 | lysine decarboxylase CadA | - |
| J8I95_RS22045 (4565409) | 4565409..4566866 | + | 1458 | WP_000856828.1 | dipeptide/tripeptide permease DtpC | - |
| J8I95_RS22050 (4567103) | 4567103..4568620 | + | 1518 | WP_000003805.1 | lysine--tRNA ligase | - |
| J8I95_RS22055 (4568739) | 4568739..4568912 | - | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| J8I95_RS22060 (4568940) | 4568940..4569236 | - | 297 | WP_001312331.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| J8I95_RS22065 (4569465) | 4569465..4569737 | - | 273 | WP_000405647.1 | GNAT family N-acetyltransferase | - |
| J8I95_RS22070 (4569749) | 4569749..4569979 | - | 231 | WP_000373291.1 | 4Fe-4S mono-cluster protein YjdI | - |
| J8I95_RS22075 (4570160) | 4570160..4571791 | + | 1632 | WP_001216466.1 | sensor histidine kinase | - |
| J8I95_RS22080 (4571788) | 4571788..4572507 | + | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|