MGE detailed information
MGE type: Prophage MGE length: 34242 bp
Accession: NZ_CP072566 Location: 2256755..2290996 Organism: Escherichia coli strain WG5::TT12A Replicon: chromosome
Accession: NZ_CP072566 Location: 2256755..2290996 Organism: Escherichia coli strain WG5::TT12A Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| J8F85_RS10750 (2253441) | 2253441..2255126 | - | 1686 | Protein_2110 | molybdopterin-dependent oxidoreductase | - |
| J8F85_RS10755 (2255118) | 2255118..2255666 | + | 549 | Protein_2111 | starvation-sensing protein RspA | - |
| J8F85_RS10760 (2255678) | 2255678..2256697 | + | 1020 | WP_000836066.1 | Zn-dependent oxidoreductase | - |
| J8F85_RS10765 (2256885) | 2256885..2258165 | - | 1281 | WP_000876986.1 | Putative defective protein IntQ ; Integrase | Integrase |
| J8F85_RS10770 (2258200) | 2258200..2258451 | - | 252 | WP_000005552.1 | excisionase family protein | - |
| J8F85_RS10775 (2258524) | 2258524..2260995 | - | 2472 | WP_081508834.1 | exonuclease | - |
| J8F85_RS10780 (2261088) | 2261088..2261279 | - | 192 | WP_001083297.1 | lysis protein YdfD | - |
| J8F85_RS10785 (2261276) | 2261276..2261464 | - | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| J8F85_RS10790 (2262032) | 2262032..2262250 | - | 219 | WP_001171942.1 | protein YdfC | - |
| J8F85_RS22510 (2262280) | 2262280..2262408 | - | 129 | WP_000344964.1 | protein YdfB | - |
| J8F85_RS10795 (2262410) | 2262410..2262565 | - | 156 | WP_000379575.1 | DUF1391 family protein | - |
| J8F85_RS10800 (2262732) | 2262732..2263139 | - | 408 | WP_000448564.1 | DNA-binding transcriptional dual regulator DicA | - |
| J8F85_RS10805 (2263223) | 2263223..2263453 | + | 231 | WP_000920568.1 | dicB transcriptional regulator DicC | - |
| J8F85_RS10810 (2263437) | 2263437..2263859 | + | 423 | Protein_2123 | toxin YdaT family protein | - |
| J8F85_RS10815 (2264077) | 2264077..2264498 | + | 422 | Protein_2124 | hypothetical protein | - |
| J8F85_RS10825 (2266379) | 2266379..2267401 | + | 1023 | Protein_2126 | ISNCY family transposase ISCARN112 | Transposase |
| J8F85_RS10830 (2267522) | 2267522..2267671 | + | 150 | WP_011443592.1 | ISNCY family transposase ISCARN112 | Transposase |
| J8F85_RS10835 (2268108) | 2268108..2268440 | - | 333 | WP_001301033.1 | FlxA-like family protein | - |
| J8F85_RS10840 (2268643) | 2268643..2268948 | - | 306 | WP_001326990.1 | protein YdfV | - |
| J8F85_RS10845 (2268973) | 2268973..2269212 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| J8F85_RS10850 (2269212) | 2269212..2269499 | + | 288 | WP_047402633.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| J8F85_RS10855 (2269571) | 2269571..2269726 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| J8F85_RS10860 (2269943) | 2269943..2270194 | + | 252 | WP_000980994.1 | protein Rem | - |
| J8F85_RS10865 (2270261) | 2270261..2270539 | + | 279 | WP_012304870.1 | hypothetical protein | - |
| J8F85_RS10870 (2270541) | 2270541..2271590 | + | 1050 | WP_001265199.1 | DUF968 domain-containing protein | - |
| J8F85_RS10875 (2271604) | 2271604..2272356 | + | 753 | WP_001047135.1 | antitermination protein | - |
| J8F85_RS10880 (2272634) | 2272634..2272723 | - | 90 | WP_120795389.1 | hypothetical protein | - |
| J8F85_RS10885 (2272778) | 2272778..2272990 | - | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| J8F85_RS10890 (2273291) | 2273291..2273506 | + | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| J8F85_RS10895 (2273870) | 2273870..2274040 | - | 171 | WP_211180497.1 | putative zinc-binding protein YnfU | - |
| J8F85_RS10900 (2274260) | 2274260..2274475 | + | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| J8F85_RS10905 (2274480) | 2274480..2274791 | + | 312 | WP_000189916.1 | YdfR family protein | - |
| J8F85_RS10910 (2274788) | 2274788..2275321 | + | 534 | WP_047402632.1 | lysozyme | - |
| J8F85_RS10915 (2275318) | 2275318..2275815 | + | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| J8F85_RS10920 (2276178) | 2276178..2276390 | + | 213 | WP_000066495.1 | cold shock protein CspI | - |
| J8F85_RS10925 (2276401) | 2276401..2276589 | + | 189 | WP_071524604.1 | cold-shock protein | - |
| J8F85_RS10930 (2276592) | 2276592..2276657 | + | 66 | WP_120795388.1 | small protein YnfR | - |
| J8F85_RS10935 (2276662) | 2276662..2276892 | + | 231 | WP_000720962.1 | protein YnfN | - |
| J8F85_RS10940 (2277064) | 2277064..2277237 | + | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| J8F85_RS10945 (2277389) | 2277389..2277799 | - | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| J8F85_RS10950 (2277857) | 2277857..2278054 | - | 198 | WP_236941922.1 | YlcI/YnfO family protein | - |
| J8F85_RS10955 (2278029) | 2278029..2278991 | + | 963 | WP_081508886.1 | phage tail protein | - |
| J8F85_RS10960 (2278991) | 2278991..2279566 | + | 576 | WP_000885611.1 | tail fiber assembly protein | - |
| J8F85_RS10965 (2279664) | 2279664..2280254 | - | 591 | WP_000078177.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| J8F85_RS10970 (2280571) | 2280571..2280804 | - | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| J8F85_RS10975 (2280873) | 2280873..2280986 | - | 114 | WP_120795384.1 | YnaM/YnfT family protein | - |
| J8F85_RS10980 (2281507) | 2281507..2282874 | + | 1368 | Protein_2157 | MHS family MFS transporter | - |
| J8F85_RS10985 (2282963) | 2282963..2284423 | + | 1461 | WP_000527809.1 | mannitol dehydrogenase family protein | - |
| J8F85_RS10990 (2284458) | 2284458..2284661 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| J8F85_RS10995 (2284838) | 2284838..2285524 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator rspR | - |
| J8F85_RS11000 (2285613) | 2285613..2286359 | - | 747 | WP_000636571.1 | NADP-dependent 3-hydroxy acid dehydrogenase YdfG | VF |
| J8F85_RS11005 (2286496) | 2286496..2288541 | + | 2046 | WP_000210373.1 | peptidyl-dipeptidase Dcp | - |
| J8F85_RS11010 (2288585) | 2288585..2289103 | - | 519 | WP_001024746.1 | 2-oxo-tetronate isomerase | - |
| J8F85_RS11015 (2289414) | 2289414..2290534 | + | 1121 | WP_085950818.1 | IS3 family transposase ISSen4 | Transposase |
| J8F85_RS11020 (2290604) | 2290604..2290996 | + | 393 | WP_000671737.1 | YdeI family stress tolerance OB fold protein | - |
| J8F85_RS11025 (2291251) | 2291251..2292141 | + | 891 | WP_000592814.1 | diguanylate cyclase DgcZ | - |
| J8F85_RS11030 (2292256) | 2292256..2292360 | - | 105 | WP_211180496.1 | protein MgtT | - |
| J8F85_RS11035 (2292360) | 2292360..2292455 | - | 96 | WP_000901367.1 | protein MgtS | - |
| J8F85_RS11040 (2292582) | 2292582..2293769 | - | 1188 | Protein_2169 | efflux MFS transporter YdeE | - |
| J8F85_RS11045 (2293964) | 2293964..2294863 | + | 900 | WP_000087214.1 | O-acetylserine/cysteine exporter | - |
| J8F85_RS11050 (2294894) | 2294894..2295112 | - | 219 | WP_000803657.1 | multiple antibiotic resistance protein MarB | - |
| J8F85_RS11055 (2295144) | 2295144..2295527 | - | 384 | WP_000091199.1 | MDR efflux pump AcrAB transcriptional activator MarA | - |
| J8F85_RS11060 (2295547) | 2295547..2295981 | - | 435 | WP_000843414.1 | multiple antibiotic resistance transcriptional regulator MarR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|