MGE detailed information
MGE type: Prophage MGE length: 34112 bp
Accession: NZ_CP072564 Location: 2320429..2354540 Organism: Escherichia coli strain WG5::PA2 Replicon: chromosome
Accession: NZ_CP072564 Location: 2320429..2354540 Organism: Escherichia coli strain WG5::PA2 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| J8F87_RS11180 (2316985) | 2316985..2318670 | - | 1686 | Protein_2193 | molybdopterin-dependent oxidoreductase | - |
| J8F87_RS11185 (2318662) | 2318662..2319210 | + | 549 | Protein_2194 | starvation-sensing protein RspA | - |
| J8F87_RS11190 (2319222) | 2319222..2320241 | + | 1020 | WP_000836066.1 | Zn-dependent oxidoreductase | - |
| J8F87_RS11195 (2320429) | 2320429..2321709 | - | 1281 | WP_000876986.1 | 6-phosphogluconolactonase ; Integrase | Integrase |
| J8F87_RS11200 (2321744) | 2321744..2321995 | - | 252 | WP_000005552.1 | excisionase family protein | - |
| J8F87_RS11205 (2322068) | 2322068..2324539 | - | 2472 | WP_081508834.1 | exonuclease | - |
| J8F87_RS11210 (2324632) | 2324632..2324823 | - | 192 | WP_001083297.1 | lysis protein YdfD | - |
| J8F87_RS11215 (2324820) | 2324820..2325008 | - | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| J8F87_RS11220 (2325576) | 2325576..2325794 | - | 219 | WP_001171942.1 | protein YdfC | - |
| J8F87_RS22455 (2325824) | 2325824..2325952 | - | 129 | WP_000344964.1 | protein YdfB | - |
| J8F87_RS11225 (2325954) | 2325954..2326109 | - | 156 | WP_000379575.1 | DUF1391 family protein | - |
| J8F87_RS11230 (2326276) | 2326276..2326683 | - | 408 | WP_000448564.1 | DNA-binding transcriptional dual regulator DicA | - |
| J8F87_RS11235 (2326767) | 2326767..2326997 | + | 231 | WP_000920568.1 | dicB transcriptional regulator DicC | - |
| J8F87_RS11240 (2326981) | 2326981..2327403 | + | 423 | Protein_2206 | toxin YdaT family protein | - |
| J8F87_RS11245 (2327621) | 2327621..2328042 | + | 422 | Protein_2207 | hypothetical protein | - |
| J8F87_RS11255 (2329923) | 2329923..2330945 | + | 1023 | Protein_2209 | ISNCY family transposase ISCARN112 | Transposase |
| J8F87_RS11260 (2331066) | 2331066..2331215 | + | 150 | WP_011443592.1 | ISNCY family transposase ISCARN112 | Transposase |
| J8F87_RS11265 (2331652) | 2331652..2331984 | - | 333 | WP_001301033.1 | FlxA-like family protein | - |
| J8F87_RS11270 (2332187) | 2332187..2332492 | - | 306 | WP_001326990.1 | protein YdfV | - |
| J8F87_RS11275 (2332517) | 2332517..2332756 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| J8F87_RS11280 (2332756) | 2332756..2333043 | + | 288 | WP_047402633.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| J8F87_RS11285 (2333115) | 2333115..2333270 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| J8F87_RS11290 (2333487) | 2333487..2333738 | + | 252 | WP_000980994.1 | protein Rem | - |
| J8F87_RS11295 (2333805) | 2333805..2334083 | + | 279 | WP_012304870.1 | hypothetical protein | - |
| J8F87_RS11300 (2334085) | 2334085..2335134 | + | 1050 | WP_001265199.1 | DUF968 domain-containing protein | - |
| J8F87_RS11305 (2335148) | 2335148..2335900 | + | 753 | WP_001047135.1 | antitermination protein | - |
| J8F87_RS11310 (2336178) | 2336178..2336267 | - | 90 | WP_120795389.1 | hypothetical protein | - |
| J8F87_RS11315 (2336322) | 2336322..2336534 | - | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| J8F87_RS11320 (2336835) | 2336835..2337050 | + | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| J8F87_RS11325 (2337414) | 2337414..2337584 | - | 171 | WP_211180497.1 | putative zinc-binding protein YnfU | - |
| J8F87_RS11330 (2337804) | 2337804..2338019 | + | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| J8F87_RS11335 (2338024) | 2338024..2338335 | + | 312 | WP_000189916.1 | YdfR family protein | - |
| J8F87_RS11340 (2338332) | 2338332..2338865 | + | 534 | WP_047402632.1 | lysozyme | - |
| J8F87_RS11345 (2338862) | 2338862..2339359 | + | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| J8F87_RS11350 (2339722) | 2339722..2339934 | + | 213 | WP_000066495.1 | cold shock protein CspI | - |
| J8F87_RS11355 (2339945) | 2339945..2340133 | + | 189 | WP_071524604.1 | cold-shock protein | - |
| J8F87_RS11360 (2340136) | 2340136..2340201 | + | 66 | WP_120795388.1 | small protein YnfR | - |
| J8F87_RS11365 (2340206) | 2340206..2340436 | + | 231 | WP_000720962.1 | protein YnfN | - |
| J8F87_RS11370 (2340608) | 2340608..2340781 | + | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| J8F87_RS11375 (2340933) | 2340933..2341343 | - | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| J8F87_RS11380 (2341401) | 2341401..2341598 | - | 198 | WP_236941922.1 | YlcI/YnfO family protein | - |
| J8F87_RS11385 (2341573) | 2341573..2342535 | + | 963 | WP_081508886.1 | phage tail protein | - |
| J8F87_RS11390 (2342535) | 2342535..2343110 | + | 576 | WP_000885611.1 | tail fiber assembly protein | - |
| J8F87_RS11395 (2343208) | 2343208..2343798 | - | 591 | WP_000078177.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| J8F87_RS11400 (2344115) | 2344115..2344348 | - | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| J8F87_RS11405 (2344417) | 2344417..2344530 | - | 114 | WP_120795384.1 | YnaM/YnfT family protein | - |
| J8F87_RS11410 (2345051) | 2345051..2346418 | + | 1368 | Protein_2240 | MHS family MFS transporter | - |
| J8F87_RS11415 (2346507) | 2346507..2347967 | + | 1461 | WP_000527809.1 | mannitol dehydrogenase family protein | - |
| J8F87_RS11420 (2348002) | 2348002..2348205 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| J8F87_RS11425 (2348382) | 2348382..2349068 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator rspR | - |
| J8F87_RS11430 (2349157) | 2349157..2349903 | - | 747 | WP_000636571.1 | Glycine betaine/carnitine transport permease protein GbuB | VF |
| J8F87_RS11435 (2350040) | 2350040..2352085 | + | 2046 | WP_000210373.1 | peptidyl-dipeptidase Dcp | - |
| J8F87_RS11440 (2352129) | 2352129..2352647 | - | 519 | WP_001024746.1 | 2-oxo-tetronate isomerase | - |
| J8F87_RS11445 (2352958) | 2352958..2354078 | + | 1121 | WP_085950818.1 | IS3 family transposase ISSen4 | Transposase |
| J8F87_RS11450 (2354148) | 2354148..2354540 | + | 393 | WP_000671737.1 | YdeI family stress tolerance OB fold protein | - |
| J8F87_RS11455 (2354795) | 2354795..2355685 | + | 891 | WP_000592814.1 | diguanylate cyclase DgcZ | - |
| J8F87_RS11460 (2355800) | 2355800..2355904 | - | 105 | WP_211180496.1 | protein MgtT | - |
| J8F87_RS11465 (2355904) | 2355904..2355999 | - | 96 | WP_000901367.1 | protein MgtS | - |
| J8F87_RS11470 (2356126) | 2356126..2357313 | - | 1188 | Protein_2252 | efflux MFS transporter YdeE | - |
| J8F87_RS11475 (2357508) | 2357508..2358407 | + | 900 | WP_000087214.1 | O-acetylserine/cysteine exporter | - |
| J8F87_RS11480 (2358438) | 2358438..2358656 | - | 219 | WP_000803657.1 | multiple antibiotic resistance protein MarB | - |
| J8F87_RS11485 (2358688) | 2358688..2359071 | - | 384 | WP_000091199.1 | MDR efflux pump AcrAB transcriptional activator MarA | - |
| J8F87_RS11490 (2359091) | 2359091..2359525 | - | 435 | WP_000843414.1 | multiple antibiotic resistance transcriptional regulator MarR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|