MGE detailed information
MGE type: Prophage MGE length: 55368 bp
Accession: NZ_CP072525 Location: 2491372..2546739 Organism: Bacillus subtilis strain YB-04 Replicon: chromosome
Accession: NZ_CP072525 Location: 2491372..2546739 Organism: Bacillus subtilis strain YB-04 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| J7W01_RS12665 (2486461) | 2486461..2486817 | - | 357 | WP_003237112.1 | ribosome silencing factor | - |
| J7W01_RS12670 (2486835) | 2486835..2487395 | - | 561 | WP_014480316.1 | bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK | - |
| J7W01_RS12675 (2487385) | 2487385..2487954 | - | 570 | WP_004398676.1 | nicotinate-nucleotide adenylyltransferase | - |
| J7W01_RS12680 (2487966) | 2487966..2488256 | - | 291 | WP_003226133.1 | ribosome assembly RNA-binding protein YhbY | - |
| J7W01_RS12685 (2488250) | 2488250..2489092 | - | 843 | WP_041850031.1 | shikimate dehydrogenase | - |
| J7W01_RS12690 (2489110) | 2489110..2490210 | - | 1101 | WP_003229966.1 | ribosome biogenesis GTPase YqeH | - |
| J7W01_RS12695 (2490214) | 2490214..2490732 | - | 519 | WP_003226126.1 | YqeG family HAD IIIA-type phosphatase | - |
| J7W01_RS12700 (2491094) | 2491094..2491234 | + | 141 | WP_003226124.1 | sporulation histidine kinase inhibitor Sda | - |
| J7W01_RS12705 (2491539) | 2491539..2492270 | - | 732 | WP_003229964.1 | GDSL-type esterase/lipase family protein | - |
| J7W01_RS12710 (2492522) | 2492522..2493274 | - | 753 | WP_021480067.1 | N-acetylmuramoyl-L-alanine amidase CwlH | - |
| J7W01_RS12715 (2493461) | 2493461..2494087 | + | 627 | WP_041850032.1 | TVP38/TMEM64 family protein | - |
| J7W01_RS12720 (2494107) | 2494107..2495000 | - | 894 | WP_041850033.1 | 2-hydroxy-3-oxopropionate reductase | VF |
| J7W01_RS12725 (2495252) | 2495252..2495974 | + | 723 | WP_032726205.1 | hypothetical protein | - |
| J7W01_RS12730 (2496007) | 2496007..2496417 | - | 411 | WP_009967785.1 | sporulation-specific Dnase NucB | - |
| J7W01_RS12735 (2496613) | 2496613..2496960 | + | 348 | Protein_2473 | sigma-70 family RNA polymerase sigma factor | - |
| J7W01_RS12740 (2496991) | 2496991..2498451 | - | 1461 | WP_223257626.1 | hypothetical protein ; Integrase | Integrase |
| J7W01_RS21485 (2498409) | 2498409..2498587 | - | 179 | Protein_2475 | hypothetical protein | - |
| J7W01_RS12745 (2498942) | 2498942..2499361 | - | 420 | WP_004398596.1 | thioredoxin-dependent arsenate reductase | - |
| J7W01_RS12750 (2499373) | 2499373..2500413 | - | 1041 | WP_032722149.1 | arsenite efflux transporter Acr3 | - |
| J7W01_RS12755 (2500436) | 2500436..2500876 | - | 441 | WP_032722151.1 | ArsI/CadI family heavy metal resistance metalloenzyme | - |
| J7W01_RS12760 (2500935) | 2500935..2501252 | - | 318 | WP_029318103.1 | arsenical resistance operon transcriptional regulator ArsR | - |
| J7W01_RS12765 (2501624) | 2501624..2502388 | - | 765 | WP_017696291.1 | YqcI/YcgG family protein | - |
| J7W01_RS12770 (2502831) | 2502831..2503958 | + | 1128 | WP_004398842.1 | response regulator aspartate phosphatase RapE | - |
| J7W01_RS12775 (2503948) | 2503948..2504082 | + | 135 | WP_004398770.1 | phosphatase RapE inhibitor PhrE | - |
| J7W01_RS12780 (2504192) | 2504192..2504350 | + | 159 | WP_003245945.1 | hypothetical protein | - |
| J7W01_RS12785 (2504720) | 2504720..2506315 | + | 1596 | WP_004399034.1 | LXG family T7SS effector endonuclease toxin YqcG | - |
| J7W01_RS12790 (2506330) | 2506330..2506908 | + | 579 | WP_009967790.1 | type VII secretion system immunity protein YqcF | - |
| J7W01_RS12795 (2507026) | 2507026..2507172 | + | 147 | WP_009967791.1 | hypothetical protein | - |
| J7W01_RS12800 (2507169) | 2507169..2507531 | - | 363 | WP_003229947.1 | hypothetical protein | - |
| J7W01_RS12805 (2507547) | 2507547..2508026 | - | 480 | WP_004399085.1 | hypothetical protein | - |
| J7W01_RS12810 (2508191) | 2508191..2509009 | - | 819 | WP_017697459.1 | hypothetical protein | VF |
| J7W01_RS12815 (2509054) | 2509054..2509476 | - | 423 | WP_017697460.1 | holin family protein | - |
| J7W01_RS12820 (2509522) | 2509522..2510415 | - | 894 | WP_032722160.1 | hypothetical protein | - |
| J7W01_RS12825 (2510503) | 2510503..2510667 | - | 165 | WP_003229944.1 | XkdX family protein | - |
| J7W01_RS12830 (2510664) | 2510664..2510999 | - | 336 | WP_009967793.1 | XkdW family protein | - |
| J7W01_RS12835 (2511009) | 2511009..2512109 | - | 1101 | WP_032722161.1 | pyocin knob domain-containing protein | - |
| J7W01_RS12840 (2512113) | 2512113..2512385 | - | 273 | WP_032722163.1 | hypothetical protein | - |
| J7W01_RS12845 (2512382) | 2512382..2512960 | - | 579 | WP_032722164.1 | YmfQ family protein | - |
| J7W01_RS12850 (2512944) | 2512944..2513990 | - | 1047 | WP_032722165.1 | baseplate J/gp47 family protein | - |
| J7W01_RS12855 (2513983) | 2513983..2514408 | - | 426 | WP_032722166.1 | DUF2634 domain-containing protein | - |
| J7W01_RS12860 (2514421) | 2514421..2514687 | - | 267 | WP_032722167.1 | DUF2577 family protein | - |
| J7W01_RS12865 (2514684) | 2514684..2515664 | - | 981 | WP_032722168.1 | hypothetical protein | - |
| J7W01_RS12870 (2515677) | 2515677..2516336 | - | 660 | WP_032722169.1 | LysM peptidoglycan-binding domain-containing protein | - |
| J7W01_RS12875 (2516329) | 2516329..2521086 | - | 4758 | WP_043940167.1 | transglycosylase SLT domain-containing protein | - |
| J7W01_RS12880 (2521089) | 2521089..2521226 | - | 138 | WP_021480099.1 | hypothetical protein | - |
| J7W01_RS12885 (2521268) | 2521268..2521717 | - | 450 | WP_032722171.1 | phage portal protein | - |
| J7W01_RS12890 (2521863) | 2521863..2522042 | + | 180 | WP_128751232.1 | type I toxin-antitoxin system toxin TxpA | Toxin Detail |
| - (2521966) | 2521966..2522188 | - | 223 | NuclAT_0 | - | Antitoxin Detail |
| - (2521966) | 2521966..2522188 | - | 223 | NuclAT_0 | - | Antitoxin Detail |
| - (2521966) | 2521966..2522188 | - | 223 | NuclAT_0 | - | Antitoxin Detail |
| - (2521966) | 2521966..2522188 | - | 223 | NuclAT_0 | - | Antitoxin Detail |
| J7W01_RS12895 (2522422) | 2522422..2522511 | + | 90 | WP_075058862.1 | type I toxin-antitoxin system toxin BsrH | - |
| J7W01_RS12900 (2522765) | 2522765..2523208 | - | 444 | WP_003229930.1 | phage tail tube protein | - |
| J7W01_RS12905 (2523211) | 2523211..2524611 | - | 1401 | WP_003229929.1 | phage tail sheath family protein | - |
| J7W01_RS12910 (2524612) | 2524612..2524803 | - | 192 | WP_010886574.1 | hypothetical protein | - |
| J7W01_RS12915 (2524800) | 2524800..2525237 | - | 438 | WP_003229927.1 | hypothetical protein | - |
| J7W01_RS12920 (2525250) | 2525250..2525753 | - | 504 | WP_003246050.1 | HK97 gp10 family phage protein | - |
| J7W01_RS12925 (2525750) | 2525750..2526112 | - | 363 | WP_003229925.1 | YqbH/XkdH family protein | - |
| J7W01_RS12930 (2526109) | 2526109..2526504 | - | 396 | WP_004398566.1 | DUF3199 family protein | - |
| J7W01_RS12935 (2526508) | 2526508..2526819 | - | 312 | WP_003229923.1 | YqbF domain-containing protein | - |
| J7W01_RS12940 (2526830) | 2526830..2527765 | - | 936 | WP_003229922.1 | phage major capsid protein | - |
| J7W01_RS12945 (2527784) | 2527784..2528752 | - | 969 | WP_003229921.1 | XkdF-like putative serine protease domain-containing protein | - |
| J7W01_RS12950 (2528785) | 2528785..2529438 | - | 654 | WP_003229920.1 | hypothetical protein | - |
| J7W01_RS12955 (2529479) | 2529479..2530396 | - | 918 | WP_004398748.1 | phage head morphogenesis protein | - |
| J7W01_RS12960 (2530393) | 2530393..2531925 | - | 1533 | WP_004398894.1 | phage portal protein | - |
| J7W01_RS12965 (2531929) | 2531929..2533224 | - | 1296 | WP_003229917.1 | PBSX family phage terminase large subunit | - |
| J7W01_RS12970 (2533217) | 2533217..2533936 | - | 720 | WP_003229916.1 | phage terminase small subunit | - |
| J7W01_RS12975 (2534004) | 2534004..2534468 | - | 465 | WP_004398685.1 | hypothetical protein | - |
| J7W01_RS12980 (2534612) | 2534612..2535067 | - | 456 | WP_004398775.1 | hypothetical protein | - |
| J7W01_RS12985 (2535265) | 2535265..2536194 | + | 930 | WP_003229913.1 | hypothetical protein | - |
| J7W01_RS12990 (2536268) | 2536268..2536474 | - | 207 | WP_003229912.1 | XtrA/YqaO family protein | - |
| J7W01_RS12995 (2536556) | 2536556..2536984 | - | 429 | WP_009967809.1 | RusA family crossover junction endodeoxyribonuclease | - |
| J7W01_RS13000 (2537080) | 2537080..2537229 | - | 150 | WP_003229910.1 | hypothetical protein | - |
| J7W01_RS13005 (2537220) | 2537220..2538161 | - | 942 | WP_075058863.1 | ATP-binding protein | - |
| J7W01_RS13010 (2538043) | 2538043..2538720 | - | 678 | WP_116362964.1 | DnaD domain protein | - |
| J7W01_RS13015 (2538796) | 2538796..2539650 | - | 855 | WP_209283691.1 | recombinase RecT | - |
| J7W01_RS13020 (2539653) | 2539653..2540612 | - | 960 | WP_004398673.1 | YqaJ viral recombinase family protein | - |
| J7W01_RS13025 (2540718) | 2540718..2540912 | - | 195 | WP_003229905.1 | hypothetical protein | - |
| J7W01_RS13030 (2540872) | 2540872..2541045 | - | 174 | WP_119123069.1 | hypothetical protein | - |
| J7W01_RS13035 (2541042) | 2541042..2541299 | - | 258 | WP_003245994.1 | YqaH family protein | - |
| J7W01_RS13040 (2541296) | 2541296..2541865 | - | 570 | WP_004398626.1 | helix-turn-helix transcriptional regulator | - |
| J7W01_RS13045 (2541939) | 2541939..2542079 | - | 141 | WP_209283692.1 | hypothetical protein | - |
| J7W01_RS13050 (2542109) | 2542109..2542339 | - | 231 | WP_004398958.1 | helix-turn-helix transcriptional regulator | - |
| J7W01_RS13055 (2542516) | 2542516..2542866 | + | 351 | WP_004398704.1 | transcriptional regulator SknR | - |
| J7W01_RS13060 (2543133) | 2543133..2543300 | - | 168 | WP_003229900.1 | hypothetical protein | - |
| J7W01_RS13065 (2543656) | 2543656..2544192 | - | 537 | WP_004399117.1 | AAA family ATPase | - |
| J7W01_RS13070 (2544461) | 2544461..2544979 | + | 519 | WP_015714342.1 | ImmA/IrrE family metallo-endopeptidase | - |
| J7W01_RS13075 (2544985) | 2544985..2545377 | + | 393 | Protein_2542 | sigma-70 family RNA polymerase sigma factor | - |
| J7W01_RS13080 (2545377) | 2545377..2545493 | + | 117 | WP_041850087.1 | hypothetical protein | - |
| J7W01_RS13085 (2545459) | 2545459..2545656 | - | 198 | Protein_2544 | recombinase family protein | - |
| J7W01_RS13090 (2545614) | 2545614..2545778 | - | 165 | WP_080332536.1 | hypothetical protein | - |
| J7W01_RS13095 (2546323) | 2546323..2546739 | - | 417 | WP_003246154.1 | phosphate-starvation-inducible protein PsiE | - |
| J7W01_RS13100 (2546785) | 2546785..2548083 | - | 1299 | WP_041850088.1 | two-component system sensor histidine kinase YrkQ | - |
| J7W01_RS13105 (2548070) | 2548070..2548765 | - | 696 | WP_041850089.1 | two-component response regulator YrkP | - |
| J7W01_RS13110 (2549033) | 2549033..2550250 | + | 1218 | WP_003229894.1 | DUF418 domain-containing protein | - |
| J7W01_RS13115 (2550169) | 2550169..2550417 | + | 249 | WP_119123070.1 | hypothetical protein | - |
| J7W01_RS13120 (2550762) | 2550762..2551319 | + | 558 | WP_003229892.1 | GNAT family N-acetyltransferase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|