MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 104430 bp
Accession: NZ_CP071759 Location: 37446..141875 Organism: Burkholderia pseudomallei strain VBP21885 Replicon: chromosome
Accession: NZ_CP071759 Location: 37446..141875 Organism: Burkholderia pseudomallei strain VBP21885 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| J3J51_RS00105 (J3J51_00105) | 33338..35170 | - | 1833 | WP_004195901.1 | autotransporter BatA | - |
| J3J51_RS00110 (J3J51_00110) | 35362..36408 | - | 1047 | WP_151271109.1 | acetyltransferase | - |
| J3J51_RS00115 (J3J51_00115) | 36398..36886 | + | 489 | WP_162472523.1 | hypothetical protein | - |
| J3J51_RS00120 (J3J51_00120) | 37170..37487 | - | 318 | WP_207866277.1 | hypothetical protein | - |
| J3J51_RS00125 (J3J51_00125) | 37643..38827 | + | 1185 | WP_207866181.1 | Prophage integrase IntA ; Integrase | Integrase |
| J3J51_RS00130 (J3J51_00130) | 39843..40070 | + | 228 | WP_207866179.1 | AlpA family transcriptional regulator | - |
| J3J51_RS00135 (J3J51_00135) | 40093..40965 | + | 873 | WP_207866177.1 | Sporulation initiation inhibitor protein Soj | VF |
| J3J51_RS00140 (J3J51_00140) | 40971..42665 | + | 1695 | WP_207866175.1 | ParB family protein | - |
| J3J51_RS00145 (J3J51_00145) | 42665..43225 | + | 561 | WP_207866173.1 | DUF2857 domain-containing protein | - |
| J3J51_RS00150 (J3J51_00150) | 43229..44389 | + | 1161 | WP_207866171.1 | STY4528 family pathogenicity island replication protein | - |
| J3J51_RS00155 (J3J51_00155) | 44690..45490 | + | 801 | WP_207866170.1 | TIGR03761 family integrating conjugative element protein | - |
| J3J51_RS00160 (J3J51_00160) | 45487..46026 | + | 540 | WP_207866168.1 | DUF3158 family protein | - |
| J3J51_RS00165 (J3J51_00165) | 46023..46436 | + | 414 | WP_207866166.1 | single-stranded DNA-binding protein | - |
| J3J51_RS00170 (J3J51_00170) | 46557..48332 | - | 1776 | WP_207866164.1 | hypothetical protein | - |
| J3J51_RS00175 (J3J51_00175) | 48344..48535 | - | 192 | WP_207866162.1 | hypothetical protein | - |
| J3J51_RS00180 (J3J51_00180) | 48617..50647 | + | 2031 | WP_207866160.1 | DNA topoisomerase III | - |
| J3J51_RS00185 (J3J51_00185) | 51078..52583 | + | 1506 | WP_207866158.1 | DNA cytosine methyltransferase | - |
| J3J51_RS00190 (J3J51_00190) | 52883..53128 | + | 246 | WP_207866156.1 | hypothetical protein | - |
| J3J51_RS00195 (J3J51_00195) | 53148..53537 | + | 390 | WP_207866154.1 | hypothetical protein | - |
| J3J51_RS00200 (J3J51_00200) | 53675..54388 | + | 714 | WP_207866152.1 | ABC transporter substrate-binding protein | - |
| J3J51_RS00205 (J3J51_00205) | 54509..55309 | + | 801 | WP_207866150.1 | GTPase | - |
| J3J51_RS00210 (J3J51_00210) | 55424..55783 | + | 360 | WP_207866148.1 | DUF3085 domain-containing protein | - |
| J3J51_RS00215 (J3J51_00215) | 56504..57022 | + | 519 | WP_207866146.1 | STY4534 family ICE replication protein | - |
| J3J51_RS00220 (J3J51_00220) | 57117..57719 | + | 603 | WP_207866144.1 | DUF3275 family protein | - |
| J3J51_RS00225 (J3J51_00225) | 57821..58471 | + | 651 | WP_207866142.1 | hypothetical protein | - |
| J3J51_RS00230 (J3J51_00230) | 58505..59641 | + | 1137 | WP_279381870.1 | DUF6094 domain-containing protein | - |
| J3J51_RS00235 (J3J51_00235) | 59737..60030 | + | 294 | WP_207866138.1 | hypothetical protein | - |
| J3J51_RS00240 (J3J51_00240) | 60116..62383 | + | 2268 | WP_207866136.1 | DEAD/DEAH box helicase | - |
| J3J51_RS00245 (J3J51_00245) | 62675..64348 | + | 1674 | WP_207866134.1 | hypothetical protein | - |
| J3J51_RS00250 (J3J51_00250) | 64580..64819 | + | 240 | WP_207866133.1 | carbon storage regulator CsrA | - |
| J3J51_RS00255 (J3J51_00255) | 64953..65549 | + | 597 | WP_207866131.1 | hypothetical protein | VF |
| J3J51_RS00260 (J3J51_00260) | 65603..66178 | + | 576 | WP_207866129.1 | hypothetical protein | - |
| J3J51_RS00265 (J3J51_00265) | 66187..66909 | + | 723 | WP_207866127.1 | TIGR03759 family integrating conjugative element protein | - |
| J3J51_RS00270 (J3J51_00270) | 66972..67463 | + | 492 | WP_243435432.1 | hypothetical protein | VF |
| J3J51_RS00275 (J3J51_00275) | 67477..67998 | + | 522 | WP_207866123.1 | integrating conjugative element protein | - |
| J3J51_RS00280 (J3J51_00280) | 68000..70159 | + | 2160 | WP_207866121.1 | type IV conjugative transfer system coupling protein TraD | - |
| J3J51_RS00285 (J3J51_00285) | 70179..70925 | + | 747 | WP_207866119.1 | TIGR03747 family integrating conjugative element membrane protein | - |
| J3J51_RS00290 (J3J51_00290) | 70934..71449 | - | 516 | WP_207866117.1 | HNH endonuclease | - |
| J3J51_RS00295 (J3J51_00295) | 71790..76469 | - | 4680 | WP_207866116.1 | ATP-binding protein | - |
| J3J51_RS00300 (J3J51_00300) | 76756..77103 | + | 348 | WP_207866114.1 | RAQPRD family integrative conjugative element protein | - |
| J3J51_RS00305 (J3J51_00305) | 77100..77339 | + | 240 | WP_015602138.1 | TIGR03758 family integrating conjugative element protein | - |
| J3J51_RS00310 (J3J51_00310) | 77356..77724 | + | 369 | WP_207866112.1 | TIGR03745 family integrating conjugative element membrane protein | - |
| J3J51_RS00315 (J3J51_00315) | 77732..78154 | + | 423 | WP_207866110.1 | TIGR03750 family conjugal transfer protein | - |
| J3J51_RS00320 (J3J51_00320) | 78151..78828 | + | 678 | WP_207866109.1 | TIGR03746 family integrating conjugative element protein | - |
| J3J51_RS00325 (J3J51_00325) | 78825..79709 | + | 885 | WP_207866108.1 | TIGR03749 family integrating conjugative element protein | - |
| J3J51_RS00330 (J3J51_00330) | 79699..81162 | + | 1464 | WP_207866107.1 | TIGR03752 family integrating conjugative element protein | - |
| J3J51_RS00335 (J3J51_00335) | 81143..81574 | + | 432 | WP_207866104.1 | TIGR03751 family conjugal transfer lipoprotein | - |
| J3J51_RS00340 (J3J51_00340) | 81574..84462 | + | 2889 | WP_243435426.1 | conjugative transfer ATPase | - |
| J3J51_RS00345 (J3J51_00345) | 84459..85205 | + | 747 | WP_207866102.1 | thioredoxin domain-containing protein | - |
| J3J51_RS00350 (J3J51_00350) | 85407..85904 | + | 498 | WP_207866100.1 | JAB domain-containing protein | - |
| J3J51_RS00355 (J3J51_00355) | 86181..88421 | + | 2241 | WP_207866098.1 | Autotransporter adhesin UpaG | VF |
| J3J51_RS00360 (J3J51_00360) | 88975..89277 | - | 303 | WP_207866095.1 | hypothetical protein | - |
| J3J51_RS00365 (J3J51_00365) | 89296..94599 | - | 5304 | WP_243435425.1 | RHS repeat-associated core domain-containing protein | - |
| J3J51_RS00370 (J3J51_00370) | 94680..100706 | - | 6027 | WP_207866093.1 | IPT/TIG domain-containing protein | - |
| J3J51_RS31015 | 100952..101455 | + | 504 | WP_243435424.1 | hypothetical protein | - |
| J3J51_RS00380 (J3J51_00380) | 101524..102528 | + | 1005 | WP_243435423.1 | cytochrome c peroxidase | - |
| J3J51_RS00385 (J3J51_00385) | 102553..103155 | - | 603 | WP_243435422.1 | TetR/AcrR family transcriptional regulator | - |
| J3J51_RS00390 (J3J51_00390) | 103091..104224 | - | 1134 | WP_243435421.1 | iron-containing redox enzyme family protein | - |
| J3J51_RS00395 (J3J51_00395) | 104565..105683 | + | 1119 | WP_207866091.1 | saccharopine dehydrogenase NADP-binding domain-containing protein | - |
| J3J51_RS00400 (J3J51_00400) | 105723..106916 | - | 1194 | WP_207866089.1 | porin | - |
| J3J51_RS00405 (J3J51_00405) | 107057..108235 | - | 1179 | WP_207866087.1 | FAD-binding oxidoreductase | - |
| J3J51_RS00410 (J3J51_00410) | 108232..109623 | - | 1392 | WP_207866085.1 | NAD(P)/FAD-dependent oxidoreductase | - |
| J3J51_RS00415 (J3J51_00415) | 109610..109912 | - | 303 | WP_207866083.1 | (2Fe-2S)-binding protein | - |
| J3J51_RS00420 (J3J51_00420) | 109909..110703 | - | 795 | WP_207866081.1 | ABC transporter permease | - |
| J3J51_RS00425 (J3J51_00425) | 110700..111596 | - | 897 | WP_207866079.1 | Spermidine/putrescine transport system permease protein PotB | VF |
| J3J51_RS00430 (J3J51_00430) | 111589..112659 | - | 1071 | WP_207866077.1 | Spermidine/putrescine import ATP-binding protein PotA | VF |
| J3J51_RS00435 (J3J51_00435) | 112735..113808 | - | 1074 | WP_207866075.1 | ABC transporter substrate-binding protein | - |
| J3J51_RS00440 (J3J51_00440) | 113917..114846 | + | 930 | WP_207866073.1 | LysR substrate-binding domain-containing protein | - |
| J3J51_RS00445 (J3J51_00445) | 114939..115727 | + | 789 | WP_207866071.1 | hypothetical protein | - |
| J3J51_RS00450 (J3J51_00450) | 115724..119038 | + | 3315 | WP_207866069.1 | NERD domain-containing protein | - |
| J3J51_RS00455 (J3J51_00455) | 119310..119678 | + | 369 | WP_279381871.1 | TIGR03757 family integrating conjugative element protein | - |
| J3J51_RS00460 (J3J51_00460) | 119675..120616 | + | 942 | WP_207866065.1 | TIGR03756 family integrating conjugative element protein | - |
| J3J51_RS00465 (J3J51_00465) | 120625..122040 | + | 1416 | WP_207866063.1 | integrating conjugative element protein | - |
| J3J51_RS00470 (J3J51_00470) | 122043..122384 | + | 342 | WP_207866061.1 | hypothetical protein | - |
| J3J51_RS00475 (J3J51_00475) | 122398..123903 | + | 1506 | WP_207866059.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| J3J51_RS00480 (J3J51_00480) | 123913..124281 | - | 369 | WP_207866057.1 | DUF3742 family protein | - |
| J3J51_RS00485 (J3J51_00485) | 124315..124728 | - | 414 | WP_207866055.1 | PIN domain-containing protein | Toxin Detail |
| J3J51_RS00490 (J3J51_00490) | 124715..124948 | - | 234 | WP_042583866.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| J3J51_RS00495 (J3J51_00495) | 125437..125904 | + | 468 | WP_207866053.1 | hypothetical protein | - |
| J3J51_RS00500 (J3J51_00500) | 125938..127596 | - | 1659 | WP_207866051.1 | MASE1 domain-containing protein | - |
| J3J51_RS00505 (J3J51_00505) | 127909..129741 | + | 1833 | WP_207866049.1 | MobH family relaxase | - |
| J3J51_RS00510 (J3J51_00510) | 129943..132822 | + | 2880 | WP_207866047.1 | SNF2-related protein | - |
| J3J51_RS00515 (J3J51_00515) | 132846..134492 | + | 1647 | WP_243435419.1 | AIPR family protein | - |
| J3J51_RS00520 (J3J51_00520) | 134485..135174 | + | 690 | WP_243435418.1 | hypothetical protein | - |
| J3J51_RS00525 (J3J51_00525) | 135189..136877 | + | 1689 | WP_207866043.1 | site-specific DNA-methyltransferase | - |
| J3J51_RS00530 (J3J51_00530) | 136877..139615 | + | 2739 | WP_207866041.1 | DEAD/DEAH box helicase family protein | - |
| J3J51_RS00535 (J3J51_00535) | 139737..141506 | + | 1770 | WP_207866039.1 | ATP-binding protein | - |
| J3J51_RS00545 (J3J51_00545) | 142069..143319 | - | 1251 | WP_004191166.1 | aspartate kinase | - |
| J3J51_RS00550 (J3J51_00550) | 143302..143544 | + | 243 | WP_004192925.1 | hypothetical protein | - |
| J3J51_RS00555 (J3J51_00555) | 143660..145129 | - | 1470 | WP_038736859.1 | tRNA lysidine(34) synthetase TilS | - |
| J3J51_RS00560 (J3J51_00560) | 145173..146144 | - | 972 | WP_004193249.1 | acetyl-CoA carboxylase carboxyltransferase subunit alpha | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|