MGE detailed information
MGE type: Prophage MGE length: 48510 bp
Accession: NZ_CP071263 Location: 889077..937586 Organism: Escherichia coli strain MEI003 Replicon: chromosome
Accession: NZ_CP071263 Location: 889077..937586 Organism: Escherichia coli strain MEI003 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| J0G23_RS04575 () | 884330..885334 | + | 1005 | WP_021564447.1 | protein-methionine-sulfoxide reductase catalytic subunit MsrP | - |
| J0G23_RS04580 () | 885335..885970 | + | 636 | WP_024229282.1 | protein-methionine-sulfoxide reductase heme-binding subunit MsrQ | - |
| J0G23_RS04585 () | 886227..886877 | + | 651 | WP_024229283.1 | metal-binding protein ZinT | - |
| J0G23_RS04590 () | 887818..887906 | + | 89 | Protein_915 | YkgJ family cysteine cluster protein | - |
| J0G23_RS04595 () | 888322..888891 | - | 570 | WP_000938107.1 | T3SS effector caspase inhibitor NleF | - |
| J0G23_RS04600 () | 888946..889857 | - | 912 | Protein_917 | hypothetical protein | VF |
| J0G23_RS04605 () | 890021..890131 | - | 111 | Protein_918 | tail fiber assembly protein | - |
| J0G23_RS04610 () | 890178..890465 | - | 288 | Protein_919 | type III secretion system effector zinc metalloprotease NleC | - |
| J0G23_RS04615 () | 890499..891479 | - | 981 | WP_000950813.1 | hypothetical protein | VF |
| J0G23_RS04620 () | 891656..891925 | - | 270 | WP_001023459.1 | phage tail fiber C-terminal domain-containing protein | - |
| J0G23_RS04625 () | 891927..893240 | - | 1314 | WP_053893970.1 | ISNCY family transposase KIS | Transposase |
| J0G23_RS04630 () | 893305..893928 | - | 624 | WP_001360257.1 | Attachment invasion locus protein | VF |
| J0G23_RS04635 () | 893997..897473 | - | 3477 | WP_250375865.1 | host specificity protein J | - |
| J0G23_RS04640 () | 897607..898134 | + | 528 | WP_000649829.1 | Superoxide dismutase [Cu-Zn] 1 | VF |
| J0G23_RS04645 () | 898325..898906 | - | 582 | WP_250375886.1 | tail assembly protein | - |
| J0G23_RS04650 () | 898903..899646 | - | 744 | WP_053897822.1 | C40 family peptidase | - |
| J0G23_RS04655 () | 899652..900350 | - | 699 | WP_001357740.1 | phage minor tail protein L | - |
| J0G23_RS04660 () | 900350..900679 | - | 330 | WP_000847304.1 | phage tail protein | - |
| J0G23_RS04665 () | 900676..903255 | - | 2580 | WP_053897821.1 | phage tail tape measure protein | - |
| J0G23_RS04670 () | 903236..903649 | - | 414 | WP_024230255.1 | phage tail assembly protein T | - |
| J0G23_RS04675 () | 903676..904107 | - | 432 | WP_000479106.1 | phage minor tail protein G | - |
| J0G23_RS04680 () | 904121..904873 | - | 753 | WP_000106786.1 | phage tail protein | - |
| J0G23_RS04685 () | 904881..905276 | - | 396 | WP_000683066.1 | phage minor tail U family protein | - |
| J0G23_RS04690 () | 905273..905806 | - | 534 | WP_000975041.1 | phage tail protein | - |
| J0G23_RS04695 () | 905821..906174 | - | 354 | WP_024246168.1 | head-tail joining protein | - |
| J0G23_RS04700 () | 906167..906550 | - | 384 | WP_024230267.1 | DNA-packaging protein FI | - |
| J0G23_RS04705 () | 906601..907629 | - | 1029 | WP_000522623.1 | major capsid protein | - |
| J0G23_RS04710 () | 907687..908034 | - | 348 | WP_000256809.1 | head decoration protein | - |
| J0G23_RS04715 () | 908071..909576 | - | 1506 | WP_024246169.1 | S49 family peptidase | - |
| J0G23_RS04720 () | 909566..911158 | - | 1593 | WP_000831765.1 | phage portal protein | - |
| J0G23_RS04725 () | 911155..911361 | - | 207 | WP_000259002.1 | gpW family head-tail joining protein | - |
| J0G23_RS04730 () | 911345..913273 | - | 1929 | WP_021559917.1 | phage terminase large subunit family protein | - |
| J0G23_RS04735 () | 913245..913754 | - | 510 | WP_000235436.1 | terminase small subunit | - |
| J0G23_RS04740 () | 914157..914381 | + | 225 | WP_001300236.1 | YlcI/YnfO family protein | - |
| J0G23_RS04745 () | 914463..914777 | - | 315 | WP_001303878.1 | PerC family transcriptional regulator | - |
| J0G23_RS04750 () | 915305..915490 | - | 186 | WP_012816791.1 | Rz1 family lipoprotein | - |
| J0G23_RS04755 () | 915712..915825 | - | 114 | WP_000675931.1 | hypothetical protein | - |
| J0G23_RS04760 () | 916046..916579 | - | 534 | WP_001003118.1 | lysozyme | - |
| J0G23_RS04765 () | 916739..917011 | + | 273 | WP_000138558.1 | hypothetical protein | - |
| J0G23_RS04770 () | 917267..917482 | - | 216 | WP_053897820.1 | class II holin family protein | - |
| J0G23_RS04775 () | 917921..919771 | - | 1851 | WP_052907104.1 | SASA family carbohydrate esterase | - |
| J0G23_RS04780 () | 919748..919891 | + | 144 | Protein_953 | hypothetical protein | - |
| J0G23_RS04785 () | 920086..920253 | - | 168 | WP_000216649.1 | DUF3927 family protein | - |
| J0G23_RS04790 () | 920250..920678 | - | 429 | Protein_955 | tellurite resistance TerB family protein | - |
| J0G23_RS04810 () | 921312..922001 | - | 690 | WP_001064889.1 | bacteriophage antitermination protein Q | - |
| J0G23_RS04815 () | 921998..922357 | - | 360 | WP_001217464.1 | RusA family crossover junction endodeoxyribonuclease | - |
| J0G23_RS04820 () | 922370..923419 | - | 1050 | WP_001265301.1 | DUF968 domain-containing protein | - |
| J0G23_RS04825 () | 923421..923699 | - | 279 | WP_032320649.1 | hypothetical protein | - |
| J0G23_RS04830 () | 923766..924029 | - | 264 | WP_000975572.1 | hypothetical protein | - |
| J0G23_RS04835 () | 924247..924402 | - | 156 | WP_000813255.1 | type I toxin-antitoxin system toxin HokD | Toxin Detail |
| - | 924414..924472 | + | 59 | - | - | Antitoxin Detail |
| J0G23_RS04840 () | 925145..925840 | + | 696 | WP_000892866.1 | hypothetical protein | - |
| J0G23_RS04845 () | 925853..926506 | + | 654 | WP_052907105.1 | class I SAM-dependent methyltransferase | - |
| J0G23_RS04850 () | 926821..927720 | - | 900 | WP_000566848.1 | SMEK domain-containing protein | - |
| J0G23_RS04855 () | 927973..928395 | - | 423 | WP_001151251.1 | DUF977 family protein | - |
| J0G23_RS04860 () | 928436..929401 | - | 966 | WP_000054501.1 | hypothetical protein | - |
| J0G23_RS04865 () | 929382..929903 | - | 522 | WP_024230398.1 | toxin YdaT family protein | - |
| J0G23_RS04870 () | 929887..930117 | - | 231 | WP_000920568.1 | dicB transcriptional regulator DicC | - |
| J0G23_RS04875 () | 930201..930608 | + | 408 | WP_000448563.1 | DNA-binding transcriptional dual regulator DicA | - |
| J0G23_RS04880 () | 930775..930930 | + | 156 | WP_000379575.1 | DUF1391 family protein | - |
| J0G23_RS25750 () | 930932..931060 | + | 129 | WP_000344935.1 | protein YdfB | - |
| J0G23_RS04885 () | 931090..931308 | + | 219 | WP_001171930.1 | protein YdfC | - |
| J0G23_RS04890 () | 931877..932065 | + | 189 | WP_000449192.1 | cell division inhibition protein DicB | - |
| J0G23_RS04895 () | 932062..932253 | + | 192 | WP_001090200.1 | DUF1482 family protein | - |
| J0G23_RS04900 () | 932346..934817 | + | 2472 | WP_000048392.1 | exonuclease | - |
| J0G23_RS04905 () | 934876..935079 | + | 204 | WP_000096345.1 | DUF4224 domain-containing protein | - |
| J0G23_RS04910 () | 935079..936129 | + | 1051 | Protein_977 | Tyrosine recombinase XerC ; Integrase | Integrase |
| J0G23_RS04920 () | 936340..937137 | + | 798 | WP_001302302.1 | DgsA anti-repressor MtfA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|