MGE detailed information
MGE type: Prophage MGE length: 58410 bp
Accession: NZ_CP070986 Location: 2005611..2064020 Organism: Staphylococcus aureus strain WBG8287 Replicon: chromosome
Accession: NZ_CP070986 Location: 2005611..2064020 Organism: Staphylococcus aureus strain WBG8287 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JYH18_RS09665 () | 2001801..2002115 | - | 315 | Protein_1866 | MAP domain-containing protein | - |
| JYH18_RS09670 () | 2002102..2003850 | - | 1749 | WP_001792928.1 | extracellular adherence protein Eap/Map | - |
| JYH18_RS09675 () | 2004236..2004486 | + | 251 | Protein_1868 | sphingomyelin phosphodiesterase | - |
| JYH18_RS09680 () | 2004808..2004987 | + | 180 | WP_000669791.1 | hypothetical protein | - |
| JYH18_RS09685 () | 2005298..2005558 | + | 261 | WP_001791826.1 | hypothetical protein | - |
| JYH18_RS09690 () | 2005611..2005961 | - | 351 | WP_000702263.1 | Staphylococcal complement inhibitor | VF |
| JYH18_RS09695 () | 2006473..2006808 | - | 336 | Protein_1872 | SH3 domain-containing protein | - |
| JYH18_RS09700 () | 2007459..2007950 | - | 492 | WP_000920038.1 | Staphylokinase | VF |
| JYH18_RS09705 () | 2008141..2008896 | - | 756 | WP_000861025.1 | CHAP domain-containing protein | - |
| JYH18_RS09710 () | 2008908..2009162 | - | 255 | WP_000611512.1 | phage holin | - |
| JYH18_RS09715 () | 2009214..2009321 | + | 108 | WP_031762631.1 | hypothetical protein | - |
| - () | 2009243..2009382 | + | 140 | NuclAT_0 | - | Antitoxin Detail |
| - () | 2009243..2009382 | + | 140 | NuclAT_0 | - | Antitoxin Detail |
| - () | 2009243..2009382 | + | 140 | NuclAT_0 | - | Antitoxin Detail |
| - () | 2009243..2009382 | + | 140 | NuclAT_0 | - | Antitoxin Detail |
| JYH18_RS09720 () | 2009374..2009550 | - | 177 | WP_011447039.1 | putative holin-like toxin | Toxin Detail |
| JYH18_RS09725 () | 2009659..2010432 | - | 774 | WP_000750412.1 | Enterotoxin type A | VF |
| JYH18_RS09730 () | 2010805..2011179 | - | 375 | WP_061653202.1 | hypothetical protein | - |
| JYH18_RS09735 () | 2011235..2011522 | - | 288 | WP_001262621.1 | hypothetical protein | - |
| JYH18_RS09740 () | 2011568..2011720 | - | 153 | WP_001000058.1 | hypothetical protein | - |
| JYH18_RS09745 () | 2011713..2015495 | - | 3783 | WP_000582130.1 | hypothetical protein | - |
| JYH18_RS09750 () | 2015511..2017001 | - | 1491 | WP_001154317.1 | phage tail family protein | - |
| JYH18_RS09755 () | 2017001..2021650 | - | 4650 | WP_001133533.1 | phage tail tape measure protein | - |
| JYH18_RS09760 () | 2021706..2021828 | - | 123 | WP_000570353.1 | hypothetical protein | - |
| JYH18_RS09765 () | 2021888..2022334 | - | 447 | WP_000442601.1 | hypothetical protein | - |
| JYH18_RS09770 () | 2022399..2023352 | - | 954 | WP_000570652.1 | Ig-like domain-containing protein | - |
| JYH18_RS09775 () | 2023353..2023733 | - | 381 | WP_000611454.1 | hypothetical protein | - |
| JYH18_RS09780 () | 2023730..2024107 | - | 378 | WP_000501244.1 | HK97 gp10 family phage protein | - |
| JYH18_RS09785 () | 2024107..2024442 | - | 336 | WP_000975314.1 | head-tail adaptor protein | - |
| JYH18_RS09790 () | 2024429..2024761 | - | 333 | WP_001177483.1 | head-tail connector protein | - |
| JYH18_RS09795 () | 2024770..2024928 | - | 159 | WP_001252099.1 | hypothetical protein | - |
| JYH18_RS09800 () | 2024964..2026211 | - | 1248 | WP_000849950.1 | phage major capsid protein | - |
| JYH18_RS09805 () | 2026299..2026883 | - | 585 | WP_000032525.1 | HK97 family phage prohead protease | - |
| JYH18_RS09810 () | 2026876..2028126 | - | 1251 | WP_000511067.1 | phage portal protein | - |
| JYH18_RS09815 () | 2028132..2028332 | - | 201 | WP_000365299.1 | hypothetical protein | - |
| JYH18_RS09820 () | 2028346..2030040 | - | 1695 | WP_000133304.1 | phage terminase large subunit | - |
| JYH18_RS09825 () | 2030043..2030510 | - | 468 | WP_000919026.1 | phage terminase small subunit P27 family | - |
| JYH18_RS09830 () | 2030639..2030983 | - | 345 | WP_000817289.1 | HNH endonuclease | - |
| JYH18_RS09835 () | 2030999..2031451 | - | 453 | WP_000406191.1 | nucleoside triphosphate pyrophosphohydrolase family protein | - |
| JYH18_RS09840 () | 2031566..2032036 | - | 471 | WP_000282755.1 | hypothetical protein | - |
| JYH18_RS09845 () | 2032059..2032259 | - | 201 | WP_001570807.1 | DUF1514 family protein | - |
| JYH18_RS09850 () | 2032259..2032909 | - | 651 | WP_001005262.1 | hypothetical protein | - |
| JYH18_RS09855 () | 2033068..2033217 | - | 150 | WP_000595265.1 | transcriptional activator RinB | - |
| JYH18_RS09860 () | 2033214..2033309 | - | 96 | Protein_1905 | DUF1381 domain-containing protein | - |
| JYH18_RS09865 () | 2033294..2033545 | - | 252 | Protein_1906 | hypothetical protein | - |
| JYH18_RS09870 () | 2033558..2033962 | - | 405 | WP_000401978.1 | RusA family crossover junction endodeoxyribonuclease | - |
| JYH18_RS09875 () | 2033971..2034189 | - | 219 | WP_000338527.1 | hypothetical protein | - |
| JYH18_RS09880 () | 2034196..2035089 | - | 894 | WP_000148328.1 | DnaD domain-containing protein | - |
| JYH18_RS09885 () | 2035119..2035589 | - | 471 | WP_000934765.1 | single-stranded DNA-binding protein | - |
| JYH18_RS09890 () | 2035590..2036207 | - | 618 | WP_072353921.1 | MBL fold metallo-hydrolase | - |
| JYH18_RS09895 () | 2036288..2037208 | - | 921 | WP_000138475.1 | recombinase RecT | - |
| JYH18_RS09900 () | 2037210..2039165 | - | 1956 | WP_047211354.1 | AAA family ATPase | - |
| JYH18_RS09905 () | 2039162..2039425 | - | 264 | WP_001205732.1 | hypothetical protein | - |
| JYH18_RS09910 () | 2039434..2039694 | - | 261 | WP_000291488.1 | hypothetical protein ; Integrase | Integrase |
| JYH18_RS09915 () | 2039787..2039948 | - | 162 | WP_000066020.1 | DUF1270 domain-containing protein | - |
| JYH18_RS09920 () | 2039945..2040265 | - | 321 | WP_001120197.1 | DUF771 domain-containing protein | - |
| JYH18_RS09925 () | 2040324..2040956 | + | 633 | WP_000275058.1 | hypothetical protein | - |
| JYH18_RS09930 () | 2040971..2041111 | - | 141 | WP_000939496.1 | hypothetical protein | - |
| JYH18_RS09935 () | 2041142..2041339 | - | 198 | WP_001148861.1 | hypothetical protein | - |
| JYH18_RS09940 () | 2041355..2042104 | - | 750 | WP_001148337.1 | phage antirepressor KilAC domain-containing protein | - |
| JYH18_RS09945 () | 2042161..2042700 | + | 540 | WP_000351243.1 | hypothetical protein | - |
| JYH18_RS09950 () | 2042724..2042984 | - | 261 | WP_000435341.1 | transcriptional regulator | - |
| JYH18_RS09955 () | 2043002..2043226 | - | 225 | WP_000338186.1 | DUF739 family protein | - |
| JYH18_RS09960 () | 2043385..2044155 | + | 771 | WP_001208482.1 | helix-turn-helix domain-containing protein | - |
| JYH18_RS09965 () | 2044351..2045079 | + | 729 | WP_001033320.1 | Enterotoxin type A | VF |
| JYH18_RS09970 () | 2045103..2045831 | + | 729 | WP_000733771.1 | Enterotoxin type A | VF |
| JYH18_RS09975 () | 2045915..2046952 | + | 1038 | WP_000857182.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| JYH18_RS09980 () | 2047003..2047833 | + | 831 | Protein_1929 | Phospholipase C | VF |
| JYH18_RS09985 () | 2048071..2049087 | - | 1017 | WP_000595401.1 | putative leukocidin-like protein 1 | VF |
| JYH18_RS09990 () | 2049109..2050161 | - | 1053 | WP_000791417.1 | putative leukocidin-like protein 2 | VF |
| JYH18_RS09995 () | 2050597..2051820 | + | 1224 | WP_000206623.1 | ArgE/DapE family deacylase | - |
| JYH18_RS10000 () | 2052192..2053037 | - | 846 | WP_000812008.1 | class I SAM-dependent methyltransferase | - |
| JYH18_RS10005 () | 2053099..2054010 | - | 912 | WP_000825510.1 | Iron(3+)-hydroxamate-binding protein FhuD | VF |
| JYH18_RS10010 () | 2054171..2055478 | + | 1308 | WP_001045079.1 | TrkH family potassium uptake protein | - |
| JYH18_RS10015 () | 2056332..2056775 | - | 444 | WP_000022887.1 | GNAT family N-acetyltransferase | - |
| JYH18_RS10020 () | 2056881..2057318 | - | 438 | WP_072419900.1 | hypothetical protein | - |
| JYH18_RS10025 () | 2057635..2058225 | - | 591 | WP_001293059.1 | terminase small subunit | - |
| JYH18_RS10030 () | 2058222..2058434 | - | 213 | WP_000128898.1 | hypothetical protein | - |
| JYH18_RS10035 () | 2058495..2059041 | + | 547 | Protein_1940 | site-specific integrase | - |
| JYH18_RS10040 () | 2059136..2060752 | - | 1617 | WP_000240642.1 | 60 kDa chaperonin | VF |
| JYH18_RS10045 () | 2060828..2061112 | - | 285 | WP_000917289.1 | co-chaperone GroES | - |
| JYH18_RS10050 () | 2061287..2062030 | + | 744 | WP_000197635.1 | CPBP family intramembrane metalloprotease | - |
| JYH18_RS10055 () | 2062055..2063197 | - | 1143 | WP_000120309.1 | hypothetical protein | VF |
| JYH18_RS10060 () | 2063394..2064020 | + | 627 | WP_000522384.1 | nitroreductase family protein | - |
| JYH18_RS10065 () | 2064381..2065166 | + | 786 | WP_000867941.1 | carbon-nitrogen family hydrolase | - |
| JYH18_RS10070 () | 2065765..2065899 | - | 135 | WP_001823225.1 | delta-lysin family phenol-soluble modulin | - |
| JYH18_RS10075 () | 2066135..2066698 | + | 564 | WP_001105705.1 | accessory gene regulator AgrB | - |
| JYH18_RS10080 () | 2066702..2066842 | + | 141 | WP_000735197.1 | cyclic lactone autoinducer peptide | - |
| JYH18_RS10085 () | 2066867..2068159 | + | 1293 | WP_000387809.1 | GHKL domain-containing protein | - |
| JYH18_RS10090 () | 2068178..2068894 | + | 717 | WP_000688492.1 | LytTR family DNA-binding domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Staphylococcus aureus subsp. aureus MW2 | Prophage | TA10154 | NC_003923 | 2047408..2102909 | 0.002 |