MGE detailed information
MGE type: Genomic_island MGE length: 17254 bp
Accession: NZ_CP070930 Location: 4184125..4201378 Organism: Escherichia coli strain 30COLEC Replicon: chromosome
Accession: NZ_CP070930 Location: 4184125..4201378 Organism: Escherichia coli strain 30COLEC Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JR883_RS20050 () | 4179778..4179984 | + | 207 | WP_039021210.1 | AlpA family transcriptional regulator | - |
| JR883_RS20055 () | 4180070..4180642 | + | 573 | WP_063122481.1 | hypothetical protein | - |
| JR883_RS20060 () | 4181042..4181658 | + | 617 | Protein_3915 | IS1 family transposase | - |
| JR883_RS20070 () | 4184125..4185144 | + | 1020 | WP_071702264.1 | transcriptional regulator | - |
| JR883_RS20075 () | 4185254..4186126 | + | 873 | WP_063122478.1 | GTPase family protein | - |
| JR883_RS20080 () | 4186843..4187661 | + | 819 | WP_001234702.1 | DUF945 domain-containing protein | - |
| JR883_RS20085 () | 4187752..4188237 | + | 486 | WP_000214317.1 | antirestriction protein | - |
| JR883_RS20090 () | 4188252..4188728 | + | 477 | WP_001186747.1 | RadC family protein | - |
| JR883_RS20095 () | 4188797..4189018 | + | 222 | WP_000692312.1 | DUF987 domain-containing protein | - |
| JR883_RS20100 () | 4189098..4189466 | + | 369 | WP_053287563.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| JR883_RS20105 () | 4189556..4189933 | + | 378 | WP_000854821.1 | type IV toxin-antitoxin system toxin CbtA | Toxin Detail |
| JR883_RS20110 () | 4189930..4190127 | + | 198 | Protein_3925 | hypothetical protein | - |
| JR883_RS20115 () | 4190155..4190352 | + | 198 | WP_023563519.1 | DUF957 domain-containing protein | - |
| JR883_RS20120 () | 4190437..4191279 | + | 843 | WP_071701699.1 | DUF4942 domain-containing protein | - |
| JR883_RS20125 () | 4192028..4193566 | + | 1539 | WP_074477856.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| JR883_RS20130 () | 4193931..4195265 | + | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| JR883_RS20135 () | 4195345..4197492 | + | 2148 | WP_001295383.1 | lysine decarboxylase CadA | - |
| JR883_RS20140 () | 4197551..4199008 | + | 1458 | WP_000856835.1 | dipeptide/tripeptide permease DtpC | - |
| JR883_RS20145 () | 4199245..4200762 | + | 1518 | WP_001295087.1 | lysine--tRNA ligase | - |
| JR883_RS20150 () | 4200881..4201054 | - | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| JR883_RS20155 () | 4201082..4201378 | - | 297 | WP_000398619.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| JR883_RS20160 () | 4201605..4201877 | - | 273 | WP_000405647.1 | N-acetyltransferase | - |
| JR883_RS20165 () | 4201889..4202119 | - | 231 | WP_000371704.1 | (4Fe-4S)-binding protein | - |
| JR883_RS20170 () | 4202300..4203931 | + | 1632 | WP_001216477.1 | sensor histidine kinase | - |
| JR883_RS20175 () | 4203928..4204647 | + | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|