MGE detailed information
MGE type: Prophage MGE length: 49877 bp
Accession: NZ_CP070930 Location: 2254133..2304009 Organism: Escherichia coli strain 30COLEC Replicon: chromosome
Accession: NZ_CP070930 Location: 2254133..2304009 Organism: Escherichia coli strain 30COLEC Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JR883_RS10750 () | 2250224..2250589 | + | 366 | WP_000276149.1 | multidrug/spermidine efflux SMR transporter subunit MdtJ | - |
| JR883_RS10755 () | 2250576..2250905 | + | 330 | WP_000046661.1 | multidrug/spermidine efflux SMR transporter subunit MdtI | - |
| JR883_RS10760 () | 2250944..2251765 | - | 822 | WP_001260865.1 | serine protease | - |
| JR883_RS10765 () | 2251865..2251948 | - | 84 | WP_000233090.1 | hypothetical protein | - |
| JR883_RS10770 () | 2252041..2252349 | - | 309 | WP_001340364.1 | acid resistance repetitive basic protein Asr | - |
| JR883_RS10775 () | 2252773..2254026 | - | 1254 | WP_205899588.1 | MFS transporter | - |
| JR883_RS10780 () | 2254133..2255026 | + | 894 | WP_001019525.1 | hypothetical protein | VF |
| JR883_RS10785 () | 2255161..2256381 | + | 1221 | WP_000225262.1 | DNA-binding transcriptional repressor Mlc | - |
| JR883_RS10790 () | 2256506..2257201 | + | 696 | WP_000919231.1 | dethiobiotin synthase | - |
| JR883_RS10795 () | 2257154..2258446 | - | 1293 | WP_001315626.1 | voltage-gated ClC-type chloride channel ClcB | - |
| JR883_RS10800 () | 2258605..2259219 | - | 615 | WP_000148710.1 | Tat proofreading chaperone DmsD | - |
| JR883_RS10805 () | 2259262..2260116 | - | 855 | WP_000526503.1 | dimethyl sulfoxide reductase anchor subunit | - |
| JR883_RS10810 () | 2260118..2260735 | - | 618 | WP_000213028.1 | dimethylsulfoxide reductase subunit B | - |
| JR883_RS10815 () | 2260746..2263169 | - | 2424 | WP_001340362.1 | dimethyl sulfoxide reductase subunit A | - |
| JR883_RS10820 () | 2263230..2265656 | - | 2427 | WP_205899589.1 | molybdopterin-dependent oxidoreductase | - |
| JR883_RS10825 () | 2265855..2266160 | - | 306 | WP_001300836.1 | DUF1161 domain-containing protein | - |
| JR883_RS10830 () | 2266268..2266978 | + | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
| JR883_RS10835 () | 2266981..2267541 | - | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| JR883_RS10840 () | 2267576..2267917 | - | 342 | WP_000705211.1 | DUF1283 family protein | - |
| JR883_RS10845 () | 2268052..2268378 | + | 327 | WP_000598292.1 | YnfA family protein | - |
| JR883_RS10850 () | 2268584..2269798 | + | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| JR883_RS10855 () | 2269810..2270829 | + | 1020 | WP_000836066.1 | Zn-dependent oxidoreductase | - |
| JR883_RS10860 () | 2270887..2270997 | + | 111 | WP_001360138.1 | hypothetical protein | - |
| JR883_RS10865 () | 2271017..2272057 | - | 1041 | Protein_2123 | hypothetical protein ; Integrase | Integrase |
| JR883_RS10870 () | 2272149..2273120 | + | 972 | WP_170386723.1 | IS30 family transposase ISApl1 | Transposase |
| JR883_RS10875 () | 2273316..2274941 | + | 1626 | WP_049589868.1 | hypothetical protein | VF |
| JR883_RS10880 () | 2275013..2275735 | + | 723 | WP_039003037.1 | PAP2 family protein | - |
| JR883_RS10885 () | 2275828..2276799 | + | 972 | WP_170386723.1 | IS30 family transposase ISApl1 | Transposase |
| JR883_RS10890 () | 2276995..2278620 | + | 1626 | WP_049589868.1 | hypothetical protein | VF |
| JR883_RS10895 () | 2278692..2279414 | + | 723 | WP_039003037.1 | PAP2 family protein | - |
| JR883_RS10900 () | 2279507..2280478 | + | 972 | WP_170386723.1 | IS30 family transposase ISApl1 | Transposase |
| JR883_RS10905 () | 2280422..2281495 | - | 1074 | Protein_2131 | 3'-5' exoribonuclease | - |
| JR883_RS10910 () | 2281495..2281737 | + | 243 | Protein_2132 | DUF977 family protein | - |
| JR883_RS10915 () | 2281734..2282090 | + | 357 | WP_001310834.1 | class I SAM-dependent methyltransferase | - |
| JR883_RS10920 () | 2282701..2282988 | + | 288 | Protein_2134 | hypothetical protein | - |
| JR883_RS10925 () | 2283757..2285070 | + | 1314 | WP_000589005.1 | ISNCY family transposase ISCARN112 | Transposase |
| JR883_RS10930 () | 2285532..2285864 | - | 333 | WP_001301033.1 | protein FlxA | - |
| JR883_RS10935 () | 2286067..2286372 | - | 306 | WP_001326990.1 | hypothetical protein | - |
| JR883_RS10940 () | 2286397..2286636 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| JR883_RS10945 () | 2286636..2286923 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| JR883_RS10950 () | 2286995..2287150 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| JR883_RS10955 () | 2287367..2287618 | + | 252 | WP_000980994.1 | hypothetical protein | - |
| JR883_RS10960 () | 2287685..2287963 | + | 279 | WP_012304870.1 | hypothetical protein | - |
| JR883_RS10965 () | 2287965..2289014 | + | 1050 | WP_001265198.1 | DUF968 domain-containing protein | - |
| JR883_RS10970 () | 2289028..2289780 | + | 753 | WP_196611805.1 | antitermination protein | - |
| JR883_RS10975 () | 2290058..2290147 | - | 90 | WP_120795389.1 | hypothetical protein | - |
| JR883_RS10980 () | 2290202..2290414 | - | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| JR883_RS10985 () | 2290715..2290930 | + | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| JR883_RS10990 () | 2291684..2291899 | + | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| JR883_RS10995 () | 2291904..2292215 | + | 312 | WP_000189916.1 | YdfR family protein | - |
| JR883_RS11000 () | 2292212..2292745 | + | 534 | WP_001092971.1 | lysozyme | - |
| JR883_RS11005 () | 2292742..2293239 | + | 498 | WP_205899590.1 | DUF2514 family protein | - |
| JR883_RS11010 () | 2293602..2293814 | + | 213 | WP_000066495.1 | cold shock protein CspI | - |
| JR883_RS11015 () | 2293825..2294013 | + | 189 | WP_071524604.1 | cold-shock protein | - |
| JR883_RS11020 () | 2294016..2294081 | + | 66 | WP_120795388.1 | hypothetical protein | - |
| JR883_RS11025 () | 2294161..2294316 | + | 156 | WP_001309517.1 | hypothetical protein | - |
| JR883_RS11030 () | 2294488..2294660 | + | 173 | Protein_2156 | addiction module toxin, GnsA/GnsB family | - |
| JR883_RS11035 () | 2294812..2295222 | - | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| JR883_RS11040 () | 2295280..2295513 | - | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| JR883_RS11045 () | 2295597..2298191 | + | 2595 | WP_074478589.1 | phage portal protein | - |
| JR883_RS11050 () | 2298152..2300137 | + | 1986 | WP_205899591.1 | tail fiber protein | - |
| JR883_RS11055 () | 2300137..2300712 | + | 576 | WP_205899592.1 | tail fiber assembly protein | - |
| JR883_RS11060 () | 2300810..2301400 | - | 591 | WP_000086525.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| JR883_RS11065 () | 2301717..2301950 | - | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| JR883_RS11070 () | 2302019..2302132 | - | 114 | WP_120795384.1 | hypothetical protein | - |
| JR883_RS11075 () | 2302726..2304009 | + | 1284 | Protein_2165 | MHS family MFS transporter YdfJ | - |
| JR883_RS11080 () | 2304098..2305558 | + | 1461 | WP_112872383.1 | mannitol dehydrogenase family protein | - |
| JR883_RS11085 () | 2305594..2305797 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| JR883_RS11090 () | 2305974..2306660 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator YdfH | - |
| JR883_RS11095 () | 2306749..2307495 | - | 747 | WP_001324973.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|