MGE detailed information
MGE type: Conjugative plasmid MGE length: 99190 bp
Accession: NZ_CP069979 Location: 1..99190 Organism: Escherichia coli strain FDAARGOS_1299 Replicon: plasmid unnamed
Accession: NZ_CP069979 Location: 1..99190 Organism: Escherichia coli strain FDAARGOS_1299 Replicon: plasmid unnamed
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| I6K29_RS24400 (570) | 570..981 | - | 412 | Protein_0 | DDE-type integrase/transposase/recombinase | - |
| I6K29_RS24405 (983) | 983..1270 | - | 288 | WP_001270422.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| I6K29_RS24410 (1267) | 1267..1518 | - | 252 | WP_001132895.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| I6K29_RS24415 (2234) | 2234..3439 | + | 1206 | WP_000817635.1 | Plasmid partition protein A | VF |
| I6K29_RS24420 (3436) | 3436..4398 | + | 963 | WP_000756328.1 | ParB family protein | - |
| I6K29_RS24425 (4632) | 4632..5408 | + | 777 | Protein_5 | transposase DNA-binding-containing protein | - |
| I6K29_RS25350 (5538) | 5538..5621 | - | 84 | Protein_6 | DUF4113 domain-containing protein | - |
| I6K29_RS24435 (5623) | 5623..6151 | + | 529 | Protein_7 | DUF1281 domain-containing protein | - |
| I6K29_RS24440 (6148) | 6148..6459 | + | 312 | WP_001309256.1 | hypothetical protein | - |
| I6K29_RS24445 (6535) | 6535..7218 | + | 684 | WP_000086171.1 | DNA methylase | - |
| I6K29_RS24450 (7219) | 7219..7440 | + | 222 | WP_001104892.1 | hypothetical protein | - |
| I6K29_RS24455 (7370) | 7370..7888 | + | 519 | WP_224955273.1 | DUF1380 family protein | - |
| I6K29_RS24460 (7933) | 7933..8703 | + | 771 | WP_001044390.1 | hypothetical protein | - |
| I6K29_RS24465 (9117) | 9117..9542 | + | 426 | WP_001198915.1 | antirestriction protein | - |
| I6K29_RS24470 (9589) | 9589..10008 | + | 420 | WP_000271761.1 | DUF1380 family protein | - |
| I6K29_RS24475 (10008) | 10008..10199 | + | 192 | WP_001027049.1 | hypothetical protein | - |
| I6K29_RS24480 (10178) | 10178..10649 | - | 472 | Protein_16 | hypothetical protein | - |
| I6K29_RS24485 (11167) | 11167..11397 | + | 231 | WP_001537563.1 | hypothetical protein | - |
| I6K29_RS24490 (11449) | 11449..12810 | + | 1362 | WP_000170705.1 | DUF3560 domain-containing protein | - |
| I6K29_RS24495 (12857) | 12857..13420 | + | 564 | WP_001309257.1 | class I SAM-dependent methyltransferase | - |
| I6K29_RS24500 (13506) | 13506..13961 | - | 456 | Protein_20 | hypothetical protein | - |
| I6K29_RS24505 (14263) | 14263..14790 | + | 528 | WP_000290834.1 | single-stranded DNA-binding protein | - |
| I6K29_RS24510 (14848) | 14848..15081 | + | 234 | WP_033550308.1 | DUF905 family protein | - |
| I6K29_RS24515 (15142) | 15142..17106 | + | 1965 | WP_033550309.1 | ParB/RepB/Spo0J family partition protein | - |
| I6K29_RS24520 (17175) | 17175..17609 | + | 435 | WP_000845953.1 | conjugation system SOS inhibitor PsiB | - |
| I6K29_RS24525 (17606) | 17606..18368 | + | 763 | Protein_25 | plasmid SOS inhibition protein A | - |
| I6K29_RS24530 (18346) | 18346..18525 | - | 180 | WP_001309233.1 | hypothetical protein | - |
| - (18337) | 18337..18561 | + | 225 | NuclAT_0 | - | - |
| - (18337) | 18337..18561 | + | 225 | NuclAT_0 | - | - |
| - (18337) | 18337..18561 | + | 225 | NuclAT_0 | - | - |
| - (18337) | 18337..18561 | + | 225 | NuclAT_0 | - | - |
| I6K29_RS25355 (18547) | 18547..18696 | + | 150 | Protein_27 | plasmid maintenance protein Mok | - |
| I6K29_RS24535 (18638) | 18638..18763 | + | 126 | WP_001372321.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| I6K29_RS25360 (19064) | 19064..19361 | - | 298 | Protein_29 | hypothetical protein | - |
| I6K29_RS24540 (19661) | 19661..19957 | + | 297 | WP_001272251.1 | hypothetical protein | - |
| I6K29_RS24545 (20067) | 20067..20888 | + | 822 | WP_001234445.1 | DUF932 domain-containing protein | - |
| I6K29_RS24550 (21185) | 21185..21694 | - | 510 | WP_000759173.1 | hypothetical protein | VF |
| I6K29_RS24555 (22108) | 22108..22491 | + | 384 | WP_001151538.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| I6K29_RS24560 (22678) | 22678..23367 | + | 690 | WP_033550311.1 | conjugal transfer transcriptional regulator TraJ | - |
| I6K29_RS24565 (23460) | 23460..23861 | + | 402 | WP_001369361.1 | conjugal transfer relaxosome DNA-bindin protein TraY | - |
| I6K29_RS24570 (23894) | 23894..24253 | + | 360 | WP_001099001.1 | type IV conjugative transfer system pilin TraA | - |
| I6K29_RS24575 (24268) | 24268..24579 | + | 312 | WP_000012100.1 | type IV conjugative transfer system protein TraL | - |
| I6K29_RS24580 (24601) | 24601..25167 | + | 567 | WP_000399780.1 | type IV conjugative transfer system protein TraE | - |
| I6K29_RS24585 (25154) | 25154..25882 | + | 729 | WP_001230767.1 | type-F conjugative transfer system secretin TraK | - |
| I6K29_RS24590 (25882) | 25882..27333 | + | 1452 | WP_000146663.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| I6K29_RS24595 (27323) | 27323..27889 | + | 567 | WP_000896598.1 | conjugal transfer pilus-stabilizing protein TraP | - |
| I6K29_RS24600 (27876) | 27876..28193 | + | 318 | WP_001057297.1 | conjugal transfer protein TrbD | - |
| I6K29_RS24605 (28193) | 28193..28708 | + | 516 | WP_000809872.1 | type IV conjugative transfer system lipoprotein TraV | - |
| I6K29_RS24610 (28843) | 28843..29064 | + | 222 | WP_001278695.1 | conjugal transfer protein TraR | - |
| I6K29_RS24615 (29057) | 29057..29470 | + | 414 | WP_000549574.1 | hypothetical protein | - |
| I6K29_RS24620 (29463) | 29463..29936 | + | 474 | WP_000549566.1 | hypothetical protein | - |
| I6K29_RS25365 (30016) | 30016..30234 | + | 219 | WP_000556746.1 | hypothetical protein | - |
| I6K29_RS24625 (30601) | 30601..33231 | + | 2631 | WP_204638968.1 | type IV secretion system protein TraC | - |
| I6K29_RS24630 (33228) | 33228..33614 | + | 387 | WP_000214084.1 | type-F conjugative transfer system protein TrbI | - |
| I6K29_RS24635 (33611) | 33611..34243 | + | 633 | WP_001203720.1 | type-F conjugative transfer system protein TraW | - |
| I6K29_RS24640 (34240) | 34240..35232 | + | 993 | WP_000830838.1 | conjugal transfer pilus assembly protein TraU | - |
| I6K29_RS24645 (35259) | 35259..35567 | + | 309 | WP_000412445.1 | hypothetical protein | - |
| I6K29_RS24650 (35630) | 35630..36148 | + | 519 | WP_000009088.1 | hypothetical protein | - |
| I6K29_RS24655 (36175) | 36175..36813 | + | 639 | WP_000087539.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| I6K29_RS24660 (36810) | 36810..37181 | + | 372 | WP_000174465.1 | hypothetical protein | - |
| I6K29_RS24665 (37206) | 37206..37628 | + | 423 | WP_001229309.1 | HNH endonuclease signature motif containing protein | - |
| I6K29_RS24670 (37625) | 37625..39475 | + | 1851 | WP_000826177.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| I6K29_RS24675 (39502) | 39502..39759 | + | 258 | WP_000864310.1 | conjugal transfer protein TrbE | - |
| I6K29_RS24680 (39752) | 39752..40495 | + | 744 | WP_001030371.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| I6K29_RS24685 (40509) | 40509..40850 | + | 342 | WP_000556795.1 | conjugal transfer protein TrbA | - |
| I6K29_RS24690 (40906) | 40906..41166 | - | 261 | WP_000736412.1 | hypothetical protein | - |
| I6K29_RS24695 (41247) | 41247..41531 | + | 285 | WP_000624194.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| I6K29_RS24700 (41518) | 41518..42063 | + | 546 | WP_000059830.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| I6K29_RS24705 (42053) | 42053..42367 | + | 315 | WP_001336805.1 | P-type conjugative transfer protein TrbJ | - |
| I6K29_RS24710 (42321) | 42321..42713 | + | 393 | WP_000138369.1 | F-type conjugal transfer protein TrbF | - |
| I6K29_RS24715 (42700) | 42700..44073 | + | 1374 | WP_000944331.1 | conjugal transfer pilus assembly protein TraH | - |
| I6K29_RS24720 (44070) | 44070..46889 | + | 2820 | WP_001537571.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| I6K29_RS24725 (46908) | 46908..47405 | + | 498 | WP_000605862.1 | entry exclusion protein | - |
| I6K29_RS24730 (47437) | 47437..48168 | + | 732 | WP_000850422.1 | conjugal transfer complement resistance protein TraT | - |
| I6K29_RS24735 (48371) | 48371..49108 | + | 738 | WP_000199901.1 | hypothetical protein | - |
| I6K29_RS24740 (49159) | 49159..51420 | + | 2262 | WP_085435689.1 | type IV conjugative transfer system coupling protein TraD | - |
| I6K29_RS24745 (51420) | 51420..56690 | + | 5271 | WP_001545323.1 | Multifunctional conjugation protein TraI | Relaxase |
| I6K29_RS24750 (56710) | 56710..57456 | + | 747 | WP_000205709.1 | conjugal transfer pilus acetylase TraX | - |
| I6K29_RS24755 (57511) | 57511..58068 | + | 558 | WP_000139329.1 | fertility inhibition protein FinO | - |
| I6K29_RS25370 (58220) | 58220..58423 | + | 204 | WP_001336517.1 | hypothetical protein | - |
| I6K29_RS24760 (59176) | 59176..59637 | + | 462 | WP_000760080.1 | thermonuclease family protein | - |
| I6K29_RS24765 (59740) | 59740..60123 | + | 384 | WP_001109264.1 | hypothetical protein | - |
| I6K29_RS24770 (60276) | 60276..60713 | + | 438 | WP_000872609.1 | hypothetical protein | - |
| - (60808) | 60808..60864 | - | 57 | NuclAT_1 | - | - |
| - (60808) | 60808..60864 | - | 57 | NuclAT_1 | - | - |
| - (60808) | 60808..60864 | - | 57 | NuclAT_1 | - | - |
| - (60808) | 60808..60864 | - | 57 | NuclAT_1 | - | - |
| I6K29_RS24775 (60912) | 60912..61061 | + | 150 | WP_001336447.1 | Hok/Gef family protein | Toxin Detail |
| I6K29_RS24780 (61346) | 61346..61603 | + | 258 | WP_000084404.1 | replication regulatory protein RepA | - |
| I6K29_RS24785 (61837) | 61837..61911 | + | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| I6K29_RS24790 (61904) | 61904..62761 | + | 858 | WP_021534656.1 | incFII family plasmid replication initiator RepA | - |
| I6K29_RS24800 (63789) | 63789..64097 | - | 309 | Protein_83 | IS91 family transposase ISSbo1 | Transposase |
| I6K29_RS24805 (64290) | 64290..64388 | + | 99 | WP_137491101.1 | transposase | - |
| I6K29_RS24810 (64538) | 64538..64804 | - | 267 | WP_204638966.1 | hypothetical protein | - |
| I6K29_RS24815 (64834) | 64834..65604 | - | 771 | WP_000712166.1 | molybdopterin-dependent oxidoreductase | - |
| I6K29_RS24820 (65615) | 65615..66214 | - | 600 | WP_001177183.1 | cytochrome b/b6 domain-containing protein | - |
| I6K29_RS24825 (66356) | 66356..67078 | + | 723 | WP_001057737.1 | Transcriptional regulatory protein WalR | VF |
| I6K29_RS24830 (67075) | 67075..68547 | + | 1473 | WP_000621194.1 | ATP-binding protein | - |
| I6K29_RS24835 (68925) | 68925..69092 | - | 168 | Protein_90 | IS110 family transposase | - |
| I6K29_RS24840 (69146) | 69146..69850 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| I6K29_RS24845 (70129) | 70129..70890 | + | 762 | WP_001225378.1 | Na(+)-translocating NADH-quinone reductase subunit C | - |
| I6K29_RS24850 (71237) | 71237..73123 | + | 1887 | WP_001332815.1 | FTR1 family protein | - |
| I6K29_RS24855 (73164) | 73164..73691 | + | 528 | WP_000178050.1 | iron transporter | - |
| I6K29_RS24860 (73795) | 73795..75174 | + | 1380 | WP_021579170.1 | Fe-S-containing protein | - |
| I6K29_RS24865 (75177) | 75177..76460 | + | 1284 | WP_021579171.1 | ABC transporter permease | - |
| I6K29_RS24870 (76450) | 76450..77580 | + | 1131 | WP_000729218.1 | ABC transporter permease | - |
| I6K29_RS24875 (77585) | 77585..78280 | + | 696 | WP_000117262.1 | Lipoprotein-releasing system ATP-binding protein LolD | VF |
| I6K29_RS24880 (78267) | 78267..78752 | + | 486 | WP_001267176.1 | TlpA disulfide reductase family protein | - |
| I6K29_RS24885 (78777) | 78777..79262 | + | 486 | WP_000874189.1 | hypothetical protein | - |
| I6K29_RS24890 (79384) | 79384..80016 | + | 633 | Protein_101 | histidine-type phosphatase | - |
| I6K29_RS24895 (80166) | 80166..81145 | - | 980 | Protein_102 | IS5 family transposase ISKpn26 | Transposase |
| I6K29_RS24900 (81247) | 81247..81816 | + | 570 | WP_021579172.1 | Serine protease EspC | VF |
| I6K29_RS24905 (81819) | 81819..82298 | - | 480 | Protein_104 | IS3 family transposase IS629 | Transposase |
| I6K29_RS24910 (82382) | 82382..83890 | - | 1509 | WP_001189111.1 | group II intron reverse transcriptase/maturase | - |
| I6K29_RS24915 (84563) | 84563..84913 | - | 351 | Protein_106 | IS3 family transposase | - |
| I6K29_RS24920 (84999) | 84999..86498 | + | 1500 | WP_000143800.1 | IS21 family transposase ISEc10 | Transposase |
| I6K29_RS24925 (86495) | 86495..87250 | + | 756 | WP_021579173.1 | IS21 family transposase ISEc10 | Transposase |
| I6K29_RS25375 (87608) | 87608..87976 | - | 369 | Protein_109 | F1 capsule-anchoring protein | VF |
| I6K29_RS24940 (88120) | 88120..88872 | - | 753 | WP_000471454.1 | Chaperone protein caf1M | VF |
| I6K29_RS24945 (89355) | 89355..89603 | + | 249 | Protein_111 | IS21 family transposase IS21 | Transposase |
| I6K29_RS24950 (89658) | 89658..90397 | + | 740 | Protein_112 | IS3 family transposase IS629 | Transposase |
| I6K29_RS24955 (91070) | 91070..92578 | + | 1509 | WP_001189111.1 | group II intron reverse transcriptase/maturase | - |
| I6K29_RS24960 (92668) | 92668..93141 | + | 474 | Protein_114 | IS3 family transposase IS629 | Transposase |
| I6K29_RS24965 (93231) | 93231..93655 | + | 425 | Protein_115 | IS3 family transposase IS2 | Transposase |
| I6K29_RS24970 (94192) | 94192..94464 | + | 273 | WP_001322642.1 | adhesin biosynthesis transcription regulatory family protein | - |
| I6K29_RS24975 (94910) | 94910..95085 | + | 176 | Protein_117 | IS3 family transposase | - |
| I6K29_RS24980 (95311) | 95311..96480 | - | 1170 | WP_001072358.1 | hypothetical protein | - |
| I6K29_RS24985 (96847) | 96847..97035 | + | 189 | WP_001332784.1 | hypothetical protein | - |
| I6K29_RS24990 (97156) | 97156..97896 | + | 741 | WP_001066947.1 | IS91 family transposase ISMno23 | Transposase |
| I6K29_RS24995 (98139) | 98139..99116 | - | 978 | WP_001309253.1 | RepB family plasmid replication initiator protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|