MGE detailed information
MGE type: Genomic_island MGE length: 27595 bp
Accession: NZ_CP069890 Location: 2555195..2582789 Organism: Escherichia coli strain FDAARGOS_1295 Replicon: chromosome
Accession: NZ_CP069890 Location: 2555195..2582789 Organism: Escherichia coli strain FDAARGOS_1295 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| I6K25_RS12220 (2550627) | 2550627..2551445 | - | 819 | WP_001270145.1 | winged helix-turn-helix domain-containing protein | - |
| I6K25_RS12225 (2551468) | 2551468..2552046 | - | 579 | WP_000926368.1 | TetR/AcrR family transcriptional regulator | - |
| I6K25_RS12235 (2554024) | 2554024..2555202 | + | 1179 | WP_001534804.1 | MalY/PatB family protein | - |
| I6K25_RS12240 (2555195) | 2555195..2556646 | + | 1452 | WP_001063846.1 | Na+/H+ antiporter NhaC | - |
| I6K25_RS12245 (2556721) | 2556721..2556854 | - | 134 | Protein_2403 | phosphate-starvation-inducible protein PsiE | - |
| I6K25_RS12250 (2556856) | 2556856..2556972 | - | 117 | Protein_2404 | phosphoporin PhoE | - |
| I6K25_RS12255 (2557270) | 2557270..2557904 | + | 635 | Protein_2405 | IS3 family transposase IS2 | Transposase |
| I6K25_RS12260 (2557960) | 2557960..2558838 | - | 879 | WP_000769117.1 | restriction endonuclease | - |
| I6K25_RS12265 (2559166) | 2559166..2559897 | - | 732 | WP_001075487.1 | inovirus Gp2 family protein | - |
| I6K25_RS12270 (2561380) | 2561380..2562603 | - | 1224 | WP_001107221.1 | hypothetical protein | - |
| I6K25_RS12275 (2562704) | 2562704..2563588 | + | 885 | WP_000010377.1 | YfjP family GTPase | - |
| I6K25_RS12280 (2563791) | 2563791..2564471 | + | 681 | WP_001282919.1 | WYL domain-containing protein | - |
| I6K25_RS12285 (2564619) | 2564619..2565296 | + | 678 | WP_001097301.1 | hypothetical protein | - |
| I6K25_RS12290 (2565302) | 2565302..2565535 | + | 234 | WP_001278290.1 | DUF905 family protein | - |
| I6K25_RS12295 (2565625) | 2565625..2566443 | + | 819 | WP_001175160.1 | DUF932 domain-containing protein | - |
| I6K25_RS12300 (2566534) | 2566534..2567019 | + | 486 | WP_000213697.1 | antirestriction protein | - |
| I6K25_RS12305 (2567034) | 2567034..2567510 | + | 477 | WP_001298074.1 | RadC family protein | - |
| I6K25_RS12310 (2567597) | 2567597..2567818 | + | 222 | WP_000692350.1 | DUF987 domain-containing protein | - |
| I6K25_RS12315 (2567898) | 2567898..2568266 | + | 369 | WP_001285575.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| I6K25_RS12320 (2568356) | 2568356..2568733 | + | 378 | WP_001094426.1 | TA system toxin CbtA family protein | Toxin Detail |
| I6K25_RS12325 (2568730) | 2568730..2569218 | + | 489 | WP_000761683.1 | DUF5983 family protein | - |
| I6K25_RS12330 (2569230) | 2569230..2569427 | + | 198 | WP_000839272.1 | DUF957 domain-containing protein | - |
| I6K25_RS12335 (2569512) | 2569512..2569661 | + | 150 | Protein_2421 | hypothetical protein | - |
| I6K25_RS12340 (2570889) | 2570889..2572652 | + | 1764 | WP_001555776.1 | hypothetical protein | - |
| I6K25_RS12345 (2573051) | 2573051..2573230 | - | 180 | Protein_2423 | peptidase | - |
| I6K25_RS12350 (2573275) | 2573275..2574147 | - | 873 | WP_000168586.1 | HNH endonuclease | - |
| I6K25_RS12355 (2574247) | 2574247..2574351 | + | 105 | Protein_2425 | HNH endonuclease | - |
| I6K25_RS12360 (2574359) | 2574359..2575339 | - | 981 | WP_000991428.1 | sialate O-acetylesterase | - |
| I6K25_RS12365 (2575404) | 2575404..2576510 | - | 1107 | WP_001298082.1 | N-acetylneuraminate epimerase | - |
| I6K25_RS12370 (2576530) | 2576530..2577246 | - | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| I6K25_RS12375 (2578712) | 2578712..2579314 | + | 603 | WP_000790574.1 | Tyrosine recombinase XerC | VF |
| I6K25_RS12380 (2579792) | 2579792..2580388 | + | 597 | WP_000044708.1 | Tyrosine recombinase XerD | VF |
| I6K25_RS12385 (2580869) | 2580869..2581423 | + | 555 | WP_000695580.1 | Type-1 fimbrial protein, A chain | VF |
| I6K25_RS12390 (2581488) | 2581488..2582027 | + | 540 | WP_000824098.1 | putative major fimbrial subunit LpfA | VF |
| I6K25_RS12395 (2582064) | 2582064..2582789 | + | 726 | WP_000066579.1 | Chaperone protein FimC | VF |
| I6K25_RS12400 (2582855) | 2582855..2585491 | + | 2637 | WP_000120954.1 | fimbrial usher FimD | - |
| I6K25_RS12405 (2585501) | 2585501..2586031 | + | 531 | WP_001244821.1 | type 1 fimbria minor subunit FimF | - |
| I6K25_RS12410 (2586044) | 2586044..2586547 | + | 504 | WP_000870578.1 | type 1 fimbria minor subunit FimG | - |
| I6K25_RS12415 (2586567) | 2586567..2587469 | + | 903 | WP_000832214.1 | type 1 fimbria D-mannose specific adhesin FimH | - |
| I6K25_RS12420 (2587642) | 2587642..2587749 | - | 108 | Protein_2438 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|