MGE detailed information
MGE type: Genomic_island MGE length: 76673 bp
Accession: NZ_CP069480 Location: 1170802..1247474 Organism: Escherichia coli strain FDAARGOS_1257 Replicon: chromosome
Accession: NZ_CP069480 Location: 1170802..1247474 Organism: Escherichia coli strain FDAARGOS_1257 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| I6J87_RS05720 () | 1165958..1166545 | + | 588 | WP_001298544.1 | transcriptional regulator BetI | - |
| I6J87_RS05725 () | 1166559..1168031 | + | 1473 | WP_000089053.1 | betaine-aldehyde dehydrogenase | - |
| I6J87_RS05730 () | 1168045..1169715 | + | 1671 | WP_001159127.1 | choline dehydrogenase | - |
| I6J87_RS05735 () | 1170802..1171365 | + | 564 | WP_001335180.1 | Tyrosine recombinase XerD | VF |
| I6J87_RS05740 () | 1171695..1172489 | + | 795 | WP_001335181.1 | LuxR family transcriptional regulator HyxR | - |
| I6J87_RS05745 () | 1172643..1173404 | + | 762 | WP_001213042.1 | protein HyxA | - |
| I6J87_RS05750 () | 1173446..1174528 | + | 1083 | Protein_1127 | adhesin | - |
| I6J87_RS05755 () | 1174550..1175743 | + | 1194 | WP_071787751.1 | autotransporter outer membrane beta-barrel domain-containing protein | - |
| I6J87_RS05760 () | 1175927..1176595 | + | 669 | WP_001005267.1 | membrane protein | - |
| I6J87_RS05765 () | 1176838..1177533 | - | 696 | WP_001298555.1 | lactate utilization protein C | - |
| I6J87_RS05770 () | 1177526..1178953 | - | 1428 | WP_000023923.1 | iron-sulfur cluster-binding protein | - |
| I6J87_RS05775 () | 1178964..1179683 | - | 720 | WP_001102123.1 | (Fe-S)-binding protein | - |
| I6J87_RS05780 () | 1180210..1181064 | - | 855 | WP_000339603.1 | DNA-binding transcriptional regulator RclR | - |
| I6J87_RS05785 () | 1181291..1182616 | + | 1326 | WP_001046335.1 | pyridine nucleotide-disulfide oxidoreductase | - |
| I6J87_RS05790 () | 1182725..1182961 | + | 237 | WP_000474088.1 | DUF1471 domain-containing protein | - |
| I6J87_RS05795 () | 1182973..1183566 | + | 594 | WP_001298546.1 | reactive chlorine species resistance protein RclC | - |
| I6J87_RS05800 () | 1183726..1184595 | - | 870 | WP_001295799.1 | aldo/keto reductase | - |
| I6J87_RS05805 () | 1184843..1185700 | + | 858 | WP_000620997.1 | HTH-type transcriptional activator RhaR | VF |
| I6J87_RS05810 () | 1185825..1190072 | - | 4248 | WP_000092548.1 | hypothetical protein | VF |
| I6J87_RS05815 () | 1190638..1191489 | + | 852 | WP_001174452.1 | aldo/keto reductase | - |
| I6J87_RS05820 () | 1191516..1192505 | + | 990 | WP_001172293.1 | aldo/keto reductase | - |
| I6J87_RS05825 () | 1192536..1193429 | - | 894 | WP_000910711.1 | HTH-type transcriptional regulator ArgP | VF |
| I6J87_RS05830 () | 1193629..1194555 | - | 927 | WP_001304867.1 | HTH-type transcriptional regulator ArgP | VF |
| I6J87_RS05835 () | 1194712..1195632 | + | 921 | WP_000860032.1 | alpha/beta hydrolase | - |
| I6J87_RS05840 () | 1195804..1196946 | + | 1143 | WP_000182341.1 | NADH-dependent flavin oxidoreductase | - |
| I6J87_RS05845 () | 1197419..1197520 | + | 102 | WP_000662258.1 | hypothetical protein | - |
| I6J87_RS05850 () | 1197885..1198148 | + | 264 | WP_000803998.1 | type B 50S ribosomal protein L31 | - |
| I6J87_RS05855 () | 1198148..1198288 | + | 141 | WP_000866436.1 | type B 50S ribosomal protein L36 | - |
| I6J87_RS05860 () | 1198358..1198548 | - | 191 | Protein_1149 | hypothetical protein | - |
| I6J87_RS05865 () | 1199372..1199914 | + | 543 | WP_000389022.1 | hypothetical protein | VF |
| I6J87_RS05870 () | 1199989..1200576 | + | 588 | WP_000730982.1 | hypothetical protein | VF |
| I6J87_RS05875 () | 1200633..1201301 | + | 669 | WP_000716404.1 | hypothetical protein | VF |
| I6J87_RS05880 () | 1201327..1203852 | + | 2526 | WP_001131116.1 | hypothetical protein | VF |
| I6J87_RS05885 () | 1203842..1205485 | + | 1644 | WP_001265646.1 | hypothetical protein | VF |
| I6J87_RS05890 () | 1205454..1206164 | + | 711 | WP_001295798.1 | hypothetical protein | VF |
| I6J87_RS05895 () | 1206471..1206800 | + | 330 | WP_001335188.1 | YkgJ family cysteine cluster protein | - |
| I6J87_RS05900 () | 1206812..1206975 | - | 164 | Protein_1157 | tail fiber assembly protein | - |
| I6J87_RS05905 () | 1207049..1207663 | - | 615 | WP_001019923.1 | YagU family protein | - |
| I6J87_RS05910 () | 1207878..1208063 | - | 186 | WP_000146243.1 | hypothetical protein | - |
| I6J87_RS05915 () | 1208112..1208270 | + | 159 | Protein_1160 | integrase | - |
| I6J87_RS05920 () | 1208487..1209180 | - | 694 | Protein_1161 | IS1 family transposase | - |
| I6J87_RS05925 () | 1209773..1213903 | + | 4131 | WP_001034003.1 | hypothetical protein | VF |
| I6J87_RS05930 () | 1214059..1214553 | + | 495 | WP_032143180.1 | Transcriptional regulator SlyA | VF |
| I6J87_RS05935 () | 1214988..1215326 | - | 339 | WP_000772639.1 | Arm DNA-binding domain-containing protein | - |
| I6J87_RS05940 () | 1215692..1217011 | + | 1320 | WP_000144686.1 | hypothetical protein ; Integrase | Integrase |
| I6J87_RS05945 () | 1217104..1217958 | - | 855 | WP_024174313.1 | DUF4942 domain-containing protein | - |
| I6J87_RS05950 () | 1218043..1218240 | - | 198 | WP_000839247.1 | DUF957 domain-containing protein | - |
| I6J87_RS05955 () | 1218252..1218740 | - | 489 | WP_000761726.1 | hypothetical protein | - |
| I6J87_RS05960 () | 1218737..1219114 | - | 378 | WP_000854700.1 | TA system toxin CbtA family protein | Toxin Detail |
| I6J87_RS05965 () | 1219204..1219572 | - | 369 | WP_001278232.1 | type IV toxin-antitoxin system toxin CbtA | Antitoxin Detail |
| I6J87_RS05970 () | 1219735..1219956 | - | 222 | WP_000692353.1 | DUF987 domain-containing protein | - |
| I6J87_RS05975 () | 1220025..1220501 | - | 477 | WP_001186199.1 | RadC family protein | - |
| I6J87_RS05980 () | 1220517..1221002 | - | 486 | WP_000213723.1 | antirestriction protein | - |
| I6J87_RS05985 () | 1221094..1221912 | - | 819 | WP_001234709.1 | DUF945 domain-containing protein | - |
| I6J87_RS05990 () | 1222239..1225361 | - | 3123 | WP_204097931.1 | Ag43/Cah family autotransporter adhesin | - |
| I6J87_RS05995 () | 1225695..1226567 | - | 873 | WP_001069727.1 | GTPase family protein | - |
| I6J87_RS06000 () | 1226898..1227080 | + | 183 | WP_000282123.1 | hypothetical protein | - |
| I6J87_RS06005 () | 1227381..1227743 | - | 363 | WP_000229734.1 | IS66 family transposase ISEc23 | Transposase |
| I6J87_RS06010 () | 1228130..1229440 | + | 1311 | WP_000016482.1 | cadaverine/lysine antiporter | - |
| I6J87_RS06015 () | 1229471..1231597 | + | 2127 | WP_001092279.1 | lysine decarboxylase LdcC | - |
| I6J87_RS06020 () | 1231801..1232511 | + | 711 | WP_000215693.1 | helix-turn-helix domain-containing protein | - |
| I6J87_RS06025 () | 1232805..1234301 | + | 1497 | WP_001298165.1 | lysine--tRNA ligase | - |
| I6J87_RS06030 () | 1234348..1235235 | + | 888 | WP_001178453.1 | HTH-type transcriptional regulator ArgP | - |
| I6J87_RS06035 () | 1236022..1236384 | + | 363 | WP_000239761.1 | IS66 family transposase IS682 | Transposase |
| I6J87_RS06040 () | 1236381..1236728 | + | 348 | WP_000624593.1 | IS66 family transposase ISCro1 | Transposase |
| I6J87_RS06045 () | 1236748..1237347 | + | 600 | Protein_1186 | IS66 family transposase IS679 | Transposase |
| I6J87_RS06050 () | 1237416..1238198 | - | 783 | WP_077634699.1 | IS21 family transposase IS100kyp | Transposase |
| I6J87_RS06055 () | 1238195..1238767 | - | 573 | Protein_1188 | IS21 family transposase IS100kyp | Transposase |
| I6J87_RS06060 () | 1238754..1238896 | - | 143 | Protein_1189 | IS110 family transposase | - |
| I6J87_RS06065 () | 1238957..1239142 | + | 186 | Protein_1190 | IS66 family transposase IS682 | Transposase |
| I6J87_RS06070 () | 1239249..1240448 | - | 1200 | WP_001298139.1 | GTP-binding protein | - |
| I6J87_RS06075 () | 1240712..1241503 | - | 792 | WP_000977398.1 | DUF4198 domain-containing protein | - |
| I6J87_RS06080 () | 1241522..1243492 | - | 1971 | WP_001445605.1 | Vitamin B12 transporter BtuB | VF |
| I6J87_RS06085 () | 1243838..1245201 | + | 1364 | Protein_1194 | IS4 family transposase ISEc13 | Transposase |
| I6J87_RS06095 () | 1247091..1247474 | + | 384 | Protein_1195 | IS4 family transposase IS4 | Transposase |
| I6J87_RS06100 () | 1247485..1247784 | - | 300 | WP_000805229.1 | hypothetical protein | - |
| I6J87_RS06105 () | 1248322..1249437 | + | 1116 | WP_001298145.1 | salmochelin biosynthesis C-glycosyltransferase IroB | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|