MGE detailed information
MGE type: Prophage MGE length: 40609 bp
Accession: NZ_CP068828 Location: 2215432..2256040 Organism: Escherichia coli strain RIVM_C030443 Replicon: chromosome
Accession: NZ_CP068828 Location: 2215432..2256040 Organism: Escherichia coli strain RIVM_C030443 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JNN35_RS10505 () | 2212156..2212608 | + | 453 | WP_076611058.1 | dihydroneopterin triphosphate diphosphatase | - |
| JNN35_RS10510 () | 2212637..2213377 | + | 741 | WP_000907234.1 | YebC/PmpR family DNA-binding transcriptional regulator | - |
| JNN35_RS10515 () | 2213412..2213933 | + | 522 | WP_001295503.1 | crossover junction endodeoxyribonuclease RuvC | - |
| JNN35_RS10520 () | 2213935..2214537 | - | 603 | WP_001024936.1 | YebB family permuted papain-like enzyme | - |
| JNN35_RS10525 () | 2214608..2214673 | + | 66 | WP_072123646.1 | stress response small protein YobI | - |
| JNN35_RS10530 () | 2214812..2215423 | + | 612 | WP_000580323.1 | Holliday junction branch migration protein RuvA | - |
| JNN35_RS10535 () | 2215432..2216442 | + | 1011 | WP_000568522.1 | Holliday junction branch migration DNA helicase RuvB | - |
| JNN35_RS10540 () | 2216594..2217379 | - | 786 | WP_000571478.1 | hypothetical protein | VF |
| JNN35_RS10545 () | 2217376..2218131 | - | 756 | WP_000202988.1 | hypothetical protein | VF |
| JNN35_RS10550 () | 2218210..2219142 | + | 933 | WP_001376899.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| JNN35_RS10555 () | 2219158..2220480 | + | 1323 | WP_001184045.1 | murein DD-endopeptidase MepM | - |
| JNN35_RS10560 () | 2220600..2221571 | + | 972 | WP_000448381.1 | hypothetical protein | VF |
| JNN35_RS10565 () | 2221703..2223145 | - | 1443 | WP_000091148.1 | pyruvate kinase | - |
| JNN35_RS10570 () | 2223273..2224142 | - | 870 | WP_001056694.1 | DNA-binding transcriptional regulator HexR | - |
| JNN35_RS10575 () | 2224480..2225955 | + | 1476 | WP_000301727.1 | glucose-6-phosphate dehydrogenase | - |
| JNN35_RS10580 () | 2226190..2228001 | + | 1812 | WP_001069467.1 | phosphogluconate dehydratase | - |
| JNN35_RS10585 () | 2228038..2228679 | + | 642 | WP_000800512.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| JNN35_RS10590 () | 2228734..2229912 | - | 1179 | WP_000173461.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| JNN35_RS10595 () | 2230046..2230336 | + | 291 | WP_000257738.1 | DNA damage-inducible protein YebG | - |
| JNN35_RS10600 () | 2230403..2230759 | + | 357 | WP_001295500.1 | protein YebF | - |
| JNN35_RS10605 () | 2231086..2231745 | + | 660 | WP_000024735.1 | tellurite resistance TerB family protein | - |
| JNN35_RS10610 () | 2231909..2233078 | - | 1170 | WP_000942660.1 | IS200-IS605 family transposase ISEc46 | Transposase |
| JNN35_RS10615 () | 2233135..2233560 | + | 426 | WP_000064873.1 | IS200-IS605 family transposase ISEc46 | Transposase |
| JNN35_RS10620 () | 2233717..2235777 | + | 2061 | WP_001546851.1 | oligopeptidase B | - |
| JNN35_RS10625 () | 2235774..2236436 | - | 663 | WP_000944256.1 | exodeoxyribonuclease X | - |
| JNN35_RS10630 () | 2236460..2237116 | - | 657 | WP_000011651.1 | carbon-nitrogen hydrolase family protein | - |
| JNN35_RS10635 () | 2237218..2237448 | - | 231 | WP_000916763.1 | DNA polymerase III subunit theta | - |
| JNN35_RS10640 () | 2237587..2237961 | + | 375 | WP_000204705.1 | CopC domain-containing protein YobA | - |
| JNN35_RS10645 () | 2237965..2238837 | + | 873 | WP_000879330.1 | copper homeostasis membrane protein CopD | - |
| JNN35_RS10650 () | 2238850..2239191 | + | 342 | WP_000976481.1 | YebY family protein | - |
| - () | 2239219..2239490 | - | 272 | - | - | Antitoxin Detail |
| - () | 2239349..2239452 | + | 104 | - | - | Toxin Detail |
| JNN35_RS10655 () | 2239587..2240243 | + | 657 | WP_001546849.1 | protein-serine/threonine phosphatase | - |
| JNN35_RS10660 () | 2240244..2240435 | - | 192 | WP_001296140.1 | YebW family protein | - |
| JNN35_RS10665 () | 2240540..2240776 | - | 237 | WP_001295499.1 | DUF1480 family protein | - |
| JNN35_RS10670 () | 2240894..2242333 | - | 1440 | WP_001309555.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| JNN35_RS10675 () | 2242413..2245046 | - | 2634 | WP_001306757.1 | hypothetical protein | VF |
| JNN35_RS10680 () | 2245015..2246298 | - | 1284 | WP_001207282.1 | membrane integrity lipid transport subunit YebS | - |
| JNN35_RS10685 () | 2246428..2246925 | + | 498 | WP_001033105.1 | L-methionine (R)-S-oxide reductase | - |
| JNN35_RS10690 () | 2247022..2247720 | + | 699 | WP_000431370.1 | RNA chaperone ProQ | - |
| JNN35_RS10695 () | 2247740..2249788 | + | 2049 | WP_001055785.1 | carboxy terminal-processing peptidase | - |
| JNN35_RS10700 () | 2249980..2250861 | + | 882 | WP_000984517.1 | protease HtpX | - |
| JNN35_RS10705 () | 2251052..2251510 | + | 459 | WP_000526135.1 | IS200-IS605 family transposase IS200C | Transposase |
| JNN35_RS10710 () | 2251618..2252991 | - | 1374 | WP_001309553.1 | MFS transporter | - |
| JNN35_RS10715 () | 2253168..2253959 | + | 792 | WP_001262179.1 | DNA-binding transcriptional regulator KdgR | - |
| JNN35_RS10720 () | 2254103..2254341 | - | 239 | Protein_2095 | hypothetical protein | - |
| JNN35_RS10725 () | 2254500..2254643 | + | 144 | WP_000714550.1 | PhoP/PhoQ regulator MgrB | - |
| JNN35_RS10730 () | 2254718..2255005 | + | 288 | WP_001006866.1 | YebO family protein | - |
| JNN35_RS10735 () | 2255675..2255818 | + | 144 | WP_001295496.1 | YobF family protein | - |
| JNN35_RS10740 () | 2255831..2256040 | + | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| JNN35_RS10745 () | 2256206..2257015 | + | 810 | WP_000010122.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| JNN35_RS10750 () | 2257012..2257578 | - | 567 | WP_001296134.1 | manganese efflux pump MntP | - |
| JNN35_RS10755 () | 2258007..2258465 | - | 459 | WP_000156255.1 | DUF986 family protein | - |
| JNN35_RS10760 () | 2258520..2259371 | - | 852 | WP_000228655.1 | PTS mannose transporter subunit IID | - |
| JNN35_RS10765 () | 2259384..2260184 | - | 801 | WP_000406926.1 | PTS mannose transporter subunit IIC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|