MGE detailed information
MGE type: Genomic_island MGE length: 9562 bp
Accession: NZ_CP068812 Location: 2157782..2167343 Organism: Escherichia coli strain RIVM_C029020 Replicon: chromosome
Accession: NZ_CP068812 Location: 2157782..2167343 Organism: Escherichia coli strain RIVM_C029020 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JNN61_RS10185 () | 2153614..2154945 | - | 1332 | WP_000107721.1 | threonine/serine transporter TdcC | - |
| JNN61_RS10190 () | 2154967..2155956 | - | 990 | WP_000548347.1 | bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB | - |
| JNN61_RS10195 () | 2156055..2156993 | - | 939 | WP_000104211.1 | transcriptional regulator TdcA | - |
| JNN61_RS10200 () | 2157182..2157526 | + | 345 | WP_019842330.1 | transcriptional activator TdcR | - |
| JNN61_RS10205 () | 2157782..2158321 | + | 540 | WP_000675750.1 | hypothetical protein | - |
| JNN61_RS10210 () | 2158343..2159530 | + | 1188 | WP_023063583.1 | YhaC family protein | - |
| JNN61_RS10220 () | 2160167..2161312 | - | 1146 | WP_001309778.1 | glycerate 2-kinase | - |
| JNN61_RS10225 () | 2161409..2162299 | - | 891 | WP_001306012.1 | 2-hydroxy-3-oxopropionate reductase | - |
| JNN61_RS10230 () | 2162329..2163099 | - | 771 | WP_001551692.1 | 2-dehydro-3-deoxyglucarate aldolase | - |
| JNN61_RS10235 () | 2163115..2164449 | - | 1335 | WP_000599651.1 | galactarate/glucarate/glycerate transporter GarP | - |
| JNN61_RS10240 () | 2164824..2166395 | + | 1572 | WP_033878411.1 | galactarate dehydratase | - |
| JNN61_RS10245 () | 2166544..2166879 | + | 336 | WP_001551693.1 | type II toxin-antitoxin system antitoxin PrlF | Antitoxin Detail |
| JNN61_RS10250 () | 2166879..2167343 | + | 465 | WP_000347270.1 | type II toxin-antitoxin system ribonuclease toxin YhaV | Toxin Detail |
| JNN61_RS10255 () | 2167398..2168207 | - | 810 | WP_000072187.1 | aga operon transcriptional regulator AgaR | - |
| JNN61_RS10260 () | 2168456..2169736 | + | 1281 | WP_001551694.1 | tagatose-bisphosphate aldolase subunit KbaZ | - |
| JNN61_RS10265 () | 2169759..2170232 | + | 474 | WP_001295547.1 | PTS N-acetylgalactosamine transporter subunit IIB | - |
| JNN61_RS10270 () | 2170243..2171022 | + | 780 | WP_000406214.1 | PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC | - |
| JNN61_RS10275 () | 2171012..2171890 | + | 879 | WP_001295548.1 | PTS system mannose/fructose/sorbose family transporter subunit IID | - |
| JNN61_RS10280 () | 2171908..2172342 | + | 435 | WP_000948837.1 | PTS sugar transporter subunit IIA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|