MGE detailed information
MGE type: Genomic_island MGE length: 45375 bp
Accession: NZ_CP068801 Location: 4799974..4845348 Organism: Escherichia coli strain RIVM_C018220 Replicon: chromosome
Accession: NZ_CP068801 Location: 4799974..4845348 Organism: Escherichia coli strain RIVM_C018220 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JNN52_RS23415 () | 4795493..4796689 | + | 1197 | WP_001362987.1 | propanediol utilization system propionate kinase GrpG | - |
| JNN52_RS23420 () | 4796974..4797255 | + | 282 | WP_001301171.1 | propanediol utilization system shell hexameric protein GrpH | - |
| JNN52_RS23425 () | 4797277..4798062 | + | 786 | WP_001205499.1 | propanediol utilization microcompartment protein GrpI | - |
| JNN52_RS23430 () | 4798123..4799640 | + | 1518 | WP_000997839.1 | propanediol utilization system aldehyde dehydrogenase GrpJ | - |
| JNN52_RS23435 () | 4799664..4799963 | + | 300 | WP_000746009.1 | propanediol utilization system shell hexameric protein GrpK | - |
| JNN52_RS23440 () | 4799974..4800549 | + | 576 | WP_000722279.1 | propanediol utilization system protease GrpL | - |
| JNN52_RS23445 () | 4800598..4803150 | + | 2553 | WP_000890295.1 | glycyl radical diol dehydratase GrpM | - |
| JNN52_RS23450 () | 4803259..4804176 | + | 918 | WP_001044977.1 | glycyl radical diol dehydratase-activating enzyme GrpN | - |
| JNN52_RS23455 () | 4804313..4805218 | + | 906 | WP_001086421.1 | propanediol utilization system permease GrpO | - |
| JNN52_RS23460 () | 4805830..4806199 | + | 370 | Protein_4596 | reverse transcriptase/maturase | - |
| JNN52_RS23465 () | 4806199..4806792 | + | 594 | Protein_4597 | maturase | - |
| JNN52_RS23470 () | 4807375..4808604 | + | 1230 | WP_000792585.1 | propanediol utilization sensor histidine kinase GrpP | - |
| JNN52_RS23475 () | 4808621..4809676 | + | 1056 | WP_000494233.1 | HTH-type transcriptional activator RhaR | VF |
| JNN52_RS23480 () | 4809805..4810956 | + | 1152 | WP_001001003.1 | propanediol utilization system methionine adenosyltransferase GrpR | - |
| JNN52_RS23485 () | 4811001..4811546 | + | 546 | WP_000015571.1 | propanediol utilization system shell hexameric protein GrpS | - |
| JNN52_RS23490 () | 4811903..4812248 | - | 346 | Protein_4602 | hypothetical protein | VF |
| JNN52_RS23495 () | 4812680..4813377 | - | 698 | Protein_4603 | IS1 family transposase IS1A | Transposase |
| JNN52_RS23500 () | 4813434..4813646 | - | 213 | Protein_4604 | hypothetical protein | VF |
| JNN52_RS23505 () | 4813767..4814924 | - | 1158 | Protein_4605 | Multidrug resistance protein MdtB | VF |
| JNN52_RS23510 () | 4815015..4815281 | + | 267 | Protein_4606 | IS3 family transposase IS2 | Transposase |
| JNN52_RS23515 () | 4815343..4815568 | - | 226 | Protein_4607 | hypothetical protein | - |
| JNN52_RS23520 () | 4815580..4815813 | - | 234 | WP_000958486.1 | AlpA family transcriptional regulator | - |
| JNN52_RS23525 () | 4815882..4816457 | - | 576 | Protein_4609 | hypothetical protein | - |
| JNN52_RS23530 () | 4816704..4817270 | - | 567 | WP_060579145.1 | inovirus-type Gp2 protein | - |
| JNN52_RS23535 () | 4818571..4819665 | + | 1095 | WP_000370278.1 | sugar kinase | - |
| JNN52_RS23540 () | 4819684..4820934 | - | 1251 | WP_001328687.1 | NupC/NupG family nucleoside CNT transporter | - |
| JNN52_RS23545 () | 4821018..4821953 | - | 936 | WP_001290195.1 | pseudouridine-5'-phosphate glycosidase | - |
| JNN52_RS23550 () | 4821946..4822881 | - | 936 | WP_000332862.1 | pseudouridine kinase | - |
| JNN52_RS23555 () | 4823417..4823869 | - | 453 | WP_000558152.1 | N-acetyltransferase | - |
| JNN52_RS23560 () | 4824390..4825121 | - | 732 | WP_001075472.1 | inovirus Gp2 family protein | - |
| JNN52_RS23565 () | 4826574..4827797 | - | 1224 | WP_001107219.1 | hypothetical protein | - |
| JNN52_RS23570 () | 4827898..4828782 | + | 885 | WP_001116795.1 | 50S ribosome-binding GTPase | - |
| JNN52_RS23575 () | 4828985..4829665 | + | 681 | WP_021515201.1 | WYL domain-containing protein | - |
| JNN52_RS23580 () | 4829816..4830493 | + | 678 | WP_060579144.1 | hypothetical protein | - |
| JNN52_RS23585 () | 4830499..4830732 | + | 234 | WP_000883181.1 | DUF905 family protein | - |
| JNN52_RS23590 () | 4830822..4831640 | + | 819 | WP_202847426.1 | DUF945 domain-containing protein | - |
| JNN52_RS23595 () | 4831906..4832385 | + | 480 | WP_000706978.1 | antirestriction protein | - |
| JNN52_RS23600 () | 4832400..4832876 | + | 477 | WP_001186193.1 | RadC family protein | - |
| JNN52_RS23605 () | 4832963..4833184 | + | 222 | WP_000692347.1 | DUF987 domain-containing protein | - |
| JNN52_RS23610 () | 4833264..4833632 | + | 369 | WP_001285610.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| JNN52_RS23615 () | 4833721..4834098 | + | 378 | WP_000854820.1 | type IV toxin-antitoxin system toxin CbtA | Toxin Detail |
| JNN52_RS23620 () | 4834095..4834292 | + | 198 | Protein_4628 | hypothetical protein | - |
| JNN52_RS23625 () | 4834320..4834517 | + | 198 | WP_085949158.1 | DUF957 domain-containing protein | - |
| JNN52_RS23630 () | 4834602..4835162 | + | 561 | Protein_4630 | DUF4942 domain-containing protein | - |
| JNN52_RS23635 () | 4835997..4837535 | + | 1539 | WP_001187178.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| JNN52_RS23640 () | 4837901..4839235 | + | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| JNN52_RS23645 () | 4839315..4841462 | + | 2148 | WP_001550474.1 | lysine decarboxylase CadA | - |
| JNN52_RS23650 () | 4841521..4842978 | + | 1458 | WP_001550473.1 | dipeptide/tripeptide permease DtpC | - |
| JNN52_RS23655 () | 4843215..4844732 | + | 1518 | WP_001550472.1 | lysine--tRNA ligase | - |
| JNN52_RS23660 () | 4844851..4845024 | - | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| JNN52_RS23665 () | 4845052..4845348 | - | 297 | WP_000398619.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| JNN52_RS23670 () | 4845577..4845849 | - | 273 | WP_000405647.1 | N-acetyltransferase | - |
| JNN52_RS23675 () | 4845861..4846091 | - | 231 | WP_001550470.1 | (4Fe-4S)-binding protein | - |
| JNN52_RS23680 () | 4846271..4847902 | + | 1632 | WP_001216477.1 | sensor histidine kinase | - |
| JNN52_RS23685 () | 4847899..4848618 | + | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|