MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 149174 bp
Accession: NZ_CP067426 Location: 3433696..3582869 Organism: Escherichia coli O22:H8 strain 154 Replicon: chromosome
Accession: NZ_CP067426 Location: 3433696..3582869 Organism: Escherichia coli O22:H8 strain 154 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JI426_RS17215 (3428946) | 3428946..3429305 | - | 360 | WP_000904153.1 | RusA family crossover junction endodeoxyribonuclease | - |
| JI426_RS17220 (3429318) | 3429318..3430367 | - | 1050 | WP_032245807.1 | DUF968 domain-containing protein | - |
| JI426_RS17225 (3430369) | 3430369..3430641 | - | 273 | WP_032212035.1 | hypothetical protein | - |
| JI426_RS17230 (3430808) | 3430808..3430963 | - | 156 | WP_000813246.1 | Hok/Gef family protein | - |
| JI426_RS17235 (3431254) | 3431254..3431769 | - | 516 | WP_001289995.1 | hypothetical protein | - |
| JI426_RS17240 (3431766) | 3431766..3431942 | - | 177 | WP_000753060.1 | hypothetical protein | - |
| JI426_RS17245 (3431935) | 3431935..3432117 | - | 183 | WP_022581296.1 | hypothetical protein | - |
| JI426_RS17250 (3432265) | 3432265..3432570 | - | 306 | WP_053294093.1 | DUF4406 domain-containing protein | - |
| JI426_RS17255 (3432567) | 3432567..3432848 | - | 282 | WP_072094476.1 | DNA-binding protein | - |
| JI426_RS17260 (3432881) | 3432881..3433642 | - | 762 | WP_064506729.1 | DUF1627 domain-containing protein | - |
| JI426_RS17265 (3433672) | 3433672..3434412 | - | 741 | WP_000790459.1 | ATP-binding protein | - |
| JI426_RS17270 (3434419) | 3434419..3435384 | - | 966 | WP_000054520.1 | hypothetical protein | - |
| JI426_RS17275 (3435365) | 3435365..3435886 | - | 522 | WP_000705386.1 | toxin YdaT family protein | - |
| JI426_RS17280 (3435870) | 3435870..3436148 | - | 279 | WP_000548554.1 | YdaS family helix-turn-helix protein | - |
| JI426_RS17285 (3436265) | 3436265..3436663 | + | 399 | WP_000209117.1 | helix-turn-helix domain-containing protein | - |
| JI426_RS17290 (3436693) | 3436693..3436881 | + | 189 | WP_001090455.1 | hypothetical protein | Antitoxin Detail |
| JI426_RS17295 (3436885) | 3436885..3437172 | + | 288 | WP_001444087.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| JI426_RS17300 (3437444) | 3437444..3437596 | + | 153 | WP_000380321.1 | DUF1391 family protein | - |
| JI426_RS17305 (3437608) | 3437608..3437976 | + | 369 | WP_001365839.1 | hypothetical protein | - |
| JI426_RS17310 (3438761) | 3438761..3438949 | + | 189 | WP_000450222.1 | cell division inhibition protein DicB | - |
| JI426_RS17315 (3438946) | 3438946..3439134 | + | 189 | WP_022581374.1 | DUF1482 family protein | - |
| JI426_RS17320 (3439227) | 3439227..3441629 | + | 2403 | WP_136761401.1 | exonuclease | - |
| JI426_RS17325 (3441696) | 3441696..3441947 | + | 252 | WP_000273163.1 | DUF4224 domain-containing protein | - |
| JI426_RS17330 (3441916) | 3441916..3442935 | + | 1020 | WP_001367167.1 | hypothetical protein ; Integrase | Integrase |
| JI426_RS17335 (3443343) | 3443343..3444002 | + | 660 | WP_000375136.1 | FtsH protease modulator YccA | - |
| JI426_RS17340 (3444093) | 3444093..3444422 | + | 330 | WP_000904442.1 | sulfurtransferase TusE | - |
| JI426_RS17345 (3444419) | 3444419..3444697 | - | 279 | WP_000048249.1 | acylphosphatase | - |
| JI426_RS17350 (3444792) | 3444792..3445982 | + | 1191 | WP_000116297.1 | 23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI | - |
| JI426_RS17355 (3446040) | 3446040..3446357 | + | 318 | WP_001295356.1 | heat shock protein HspQ | - |
| JI426_RS17360 (3446402) | 3446402..3446815 | - | 414 | WP_000665217.1 | CoA-binding protein | - |
| JI426_RS17365 (3446988) | 3446988..3447650 | + | 663 | WP_000847791.1 | DUF2057 family protein | - |
| JI426_RS17370 (3447746) | 3447746..3448204 | + | 459 | WP_000424181.1 | methylglyoxal synthase | - |
| JI426_RS17375 (3448236) | 3448236..3450290 | - | 2055 | WP_000420533.1 | DNA helicase IV | - |
| JI426_RS17380 (3450413) | 3450413..3450859 | + | 447 | WP_001261231.1 | YccF domain-containing protein | - |
| JI426_RS17385 (3450869) | 3450869..3453031 | + | 2163 | WP_000875020.1 | YccS family putative transporter | - |
| JI426_RS17390 (3452994) | 3452994..3453623 | - | 630 | WP_000839153.1 | CRP-S regulon transcriptional coactivator Sxy | - |
| JI426_RS17395 (3453842) | 3453842..3454351 | + | 510 | WP_000288710.1 | SOS-induced cell division inhibitor SulA | - |
| JI426_RS17400 (3454708) | 3454708..3455748 | + | 1041 | WP_000750416.1 | hypothetical protein | VF |
| JI426_RS17405 (3455824) | 3455824..3456276 | - | 453 | WP_000877161.1 | macrodomain Ter protein MatP | - |
| JI426_RS17410 (3456462) | 3456462..3458222 | + | 1761 | WP_000156526.1 | Lon protease family protein | - |
| JI426_RS17415 (3458291) | 3458291..3458809 | + | 519 | WP_000227927.1 | bifunctional 3-hydroxydecanoyl-ACP dehydratase/trans-2-decenoyl-ACP isomerase | - |
| JI426_RS17420 (3458879) | 3458879..3459046 | - | 168 | WP_000828648.1 | ribosome modulation factor | - |
| JI426_RS17425 (3459302) | 3459302..3459865 | - | 564 | WP_000759123.1 | membrane integrity-associated transporter subunit PqiC | - |
| JI426_RS17430 (3459862) | 3459862..3461502 | - | 1641 | WP_000445533.1 | hypothetical protein | VF |
| JI426_RS17435 (3461507) | 3461507..3462760 | - | 1254 | WP_000333176.1 | membrane integrity-associated transporter subunit PqiA | - |
| JI426_RS17440 (3462890) | 3462890..3464797 | - | 1908 | WP_000053089.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| JI426_RS17445 (3464808) | 3464808..3466916 | - | 2109 | WP_001086549.1 | bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL | - |
| JI426_RS17450 (3467160) | 3467160..3468269 | + | 1110 | WP_000224270.1 | 6-N-hydroxylaminopurine resistance protein YcbX | - |
| JI426_RS17455 (3468266) | 3468266..3468808 | - | 543 | WP_001295353.1 | cell division protein ZapC | - |
| JI426_RS17460 (3468982) | 3468982..3469992 | - | 1011 | WP_001295352.1 | quinone-dependent dihydroorotate dehydrogenase | - |
| JI426_RS17465 (3470103) | 3470103..3470840 | - | 738 | WP_001111459.1 | hypothetical protein | VF |
| JI426_RS17470 (3470806) | 3470806..3471321 | - | 516 | WP_000919489.1 | hypothetical protein | VF |
| JI426_RS17475 (3471329) | 3471329..3471871 | - | 543 | WP_000730614.1 | hypothetical protein | VF |
| JI426_RS17480 (3471883) | 3471883..3472953 | - | 1071 | WP_001165655.1 | hypothetical protein | VF |
| JI426_RS17485 (3472944) | 3472944..3475544 | - | 2601 | WP_000286324.1 | hypothetical protein | VF |
| JI426_RS17490 (3475569) | 3475569..3476270 | - | 702 | WP_000845152.1 | hypothetical protein | VF |
| JI426_RS17495 (3476353) | 3476353..3476895 | - | 543 | WP_000750284.1 | hypothetical protein | VF |
| JI426_RS17500 (3477251) | 3477251..3477826 | + | 576 | WP_001263934.1 | NADPH-dependent FMN reductase | - |
| JI426_RS17505 (3477819) | 3477819..3478778 | + | 960 | WP_001244318.1 | aliphatic sulfonate ABC transporter substrate-binding protein SsuA | - |
| JI426_RS17510 (3478775) | 3478775..3479920 | + | 1146 | WP_000055996.1 | FMNH2-dependent alkanesulfonate monooxygenase | - |
| JI426_RS17515 (3479931) | 3479931..3480722 | + | 792 | WP_000235203.1 | aliphatic sulfonate ABC transporter permease SsuC | - |
| JI426_RS17520 (3480719) | 3480719..3481486 | + | 768 | WP_033817110.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| JI426_RS17525 (3481693) | 3481693..3484305 | - | 2613 | WP_000193844.1 | aminopeptidase N | - |
| JI426_RS17530 (3484571) | 3484571..3485773 | + | 1203 | WP_001297200.1 | nicotinate phosphoribosyltransferase | - |
| JI426_RS17535 (3485942) | 3485942..3487342 | + | 1401 | WP_000117881.1 | asparagine--tRNA ligase | - |
| JI426_RS17540 (3487944) | 3487944..3489032 | + | 1089 | WP_000977920.1 | porin OmpF | - |
| JI426_RS17545 (3489217) | 3489217..3490407 | + | 1191 | WP_000462687.1 | aspartate transaminase | - |
| JI426_RS17550 (3490686) | 3490686..3491666 | + | 981 | WP_000399648.1 | IS110 family transposase IS621 | Transposase |
| JI426_RS17555 (3491908) | 3491908..3492555 | - | 648 | WP_001109487.1 | hydroxyacylglutathione hydrolase GloC | - |
| JI426_RS17560 (3492582) | 3492582..3493130 | - | 549 | WP_001295932.1 | YcbK family protein | - |
| JI426_RS17565 (3493311) | 3493311..3495158 | - | 1848 | WP_000925997.1 | L,D-transpeptidase | - |
| JI426_RS17570 (3495419) | 3495419..3499879 | - | 4461 | WP_001471316.1 | chromosome partition protein MukB | - |
| JI426_RS17575 (3499879) | 3499879..3500583 | - | 705 | WP_001295347.1 | chromosome partition protein MukE | - |
| JI426_RS17580 (3500564) | 3500564..3501886 | - | 1323 | WP_001288850.1 | chromosome partition protein MukF | - |
| JI426_RS17585 (3501883) | 3501883..3502668 | - | 786 | WP_001298300.1 | tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM | - |
| JI426_RS17590 (3502804) | 3502804..3503583 | + | 780 | WP_000899599.1 | envelope biogenesis factor ElyC | - |
| JI426_RS17595 (3503560) | 3503560..3504453 | - | 894 | WP_000436922.1 | YcbJ family phosphotransferase | - |
| JI426_RS17600 (3504607) | 3504607..3505353 | - | 747 | WP_000011590.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | VF |
| JI426_RS17605 (3505350) | 3505350..3505532 | - | 183 | WP_000350058.1 | protein YcaR | - |
| JI426_RS17610 (3505584) | 3505584..3506816 | - | 1233 | WP_000056529.1 | crosslink repair DNA glycosylase YcaQ | - |
| JI426_RS17615 (3506853) | 3506853..3507839 | - | 987 | WP_000570542.1 | Tetraacyldisaccharide 4'-kinase | VF |
| JI426_RS17620 (3507836) | 3507836..3509584 | - | 1749 | WP_000551270.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| JI426_RS17625 (3509621) | 3509621..3511885 | - | 2265 | WP_000705706.1 | ComEC family protein | - |
| JI426_RS17630 (3512092) | 3512092..3512376 | - | 285 | WP_000167336.1 | integration host factor subunit beta | - |
| JI426_RS17635 (3512536) | 3512536..3514209 | - | 1674 | WP_000140327.1 | 30S ribosomal protein S1 | - |
| JI426_RS17640 (3514320) | 3514320..3515003 | - | 684 | WP_000125016.1 | (d)CMP kinase | - |
| JI426_RS17645 (3515176) | 3515176..3515940 | - | 765 | WP_001295345.1 | metallopeptidase YcaL | - |
| JI426_RS17650 (3516109) | 3516109..3517392 | - | 1284 | WP_000445231.1 | 3-phosphoshikimate 1-carboxyvinyltransferase | - |
| JI426_RS17655 (3517463) | 3517463..3518551 | - | 1089 | WP_000057149.1 | 3-phosphoserine/phosphohydroxythreonine transaminase | - |
| JI426_RS17660 (3518750) | 3518750..3519442 | - | 693 | WP_000642849.1 | DUF421 domain-containing protein | - |
| JI426_RS17665 (3519572) | 3519572..3521332 | + | 1761 | WP_001297197.1 | 30S ribosomal protein S12 methylthiotransferase accessory protein YcaO | - |
| JI426_RS17670 (3521738) | 3521738..3522595 | + | 858 | WP_000642546.1 | formate transporter FocA | - |
| JI426_RS17675 (3522650) | 3522650..3524932 | + | 2283 | WP_001292812.1 | formate C-acetyltransferase | - |
| JI426_RS17680 (3525124) | 3525124..3525864 | + | 741 | WP_000111043.1 | pyruvate formate lyase 1-activating protein | - |
| JI426_RS17685 (3525946) | 3525946..3526536 | - | 591 | WP_001190362.1 | NAD(P)H oxidoreductase | - |
| JI426_RS17690 (3526636) | 3526636..3527544 | + | 909 | WP_001242675.1 | LysR family transcriptional regulator | - |
| JI426_RS17695 (3527545) | 3527545..3528975 | - | 1431 | WP_000918506.1 | amino acid permease | - |
| JI426_RS17700 (3529185) | 3529185..3530333 | - | 1149 | WP_000109295.1 | MFS transporter | - |
| JI426_RS17705 (3530648) | 3530648..3531274 | + | 627 | WP_000165876.1 | isochorismate family cysteine hydrolase YcaC | - |
| JI426_RS17710 (3531310) | 3531310..3532173 | - | 864 | WP_000534648.1 | dimethyl sulfoxide reductase anchor subunit DmsC | - |
| JI426_RS17715 (3532175) | 3532175..3532792 | - | 618 | WP_000213098.1 | dimethylsulfoxide reductase subunit B | - |
| JI426_RS17720 (3532803) | 3532803..3535247 | - | 2445 | WP_000850313.1 | dimethylsulfoxide reductase subunit A | - |
| JI426_RS17725 (3535547) | 3535547..3536539 | - | 993 | WP_000023736.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| JI426_RS17730 (3536609) | 3536609..3536950 | - | 342 | WP_032210004.1 | helix-turn-helix transcriptional regulator | - |
| JI426_RS17735 (3537054) | 3537054..3537578 | + | 525 | WP_028985710.1 | Cox family DNA-binding protein | - |
| JI426_RS17740 (3537585) | 3537585..3537980 | + | 396 | WP_032210002.1 | hypothetical protein | - |
| JI426_RS17745 (3538001) | 3538001..3538519 | + | 519 | WP_047084236.1 | hypothetical protein | - |
| JI426_RS17750 (3538497) | 3538497..3538820 | - | 324 | WP_032209999.1 | hypothetical protein | - |
| JI426_RS17755 (3538929) | 3538929..3539267 | + | 339 | WP_032209998.1 | DUF4761 family protein | - |
| JI426_RS17760 (3539287) | 3539287..3539529 | + | 243 | WP_000568660.1 | DUF4754 family protein | - |
| JI426_RS28505 (3539526) | 3539526..3539651 | + | 126 | WP_000110304.1 | hypothetical protein | - |
| JI426_RS17765 (3539731) | 3539731..3540009 | + | 279 | WP_001561743.1 | hypothetical protein | - |
| JI426_RS17770 (3540021) | 3540021..3540272 | + | 252 | WP_032209995.1 | hypothetical protein | - |
| JI426_RS17775 (3540269) | 3540269..3540481 | + | 213 | WP_032209993.1 | hypothetical protein | - |
| JI426_RS17780 (3540508) | 3540508..3541062 | + | 555 | WP_032209992.1 | DNA-binding protein | - |
| JI426_RS17785 (3541383) | 3541383..3541610 | + | 228 | WP_047084235.1 | derepression protein | - |
| JI426_RS17790 (3541679) | 3541679..3542095 | + | 417 | WP_044705608.1 | hypothetical protein | - |
| JI426_RS17795 (3542092) | 3542092..3544611 | + | 2520 | WP_052771824.1 | replication endonuclease | - |
| JI426_RS17800 (3544608) | 3544608..3545012 | + | 405 | WP_028985698.1 | hypothetical protein | - |
| JI426_RS17805 (3545021) | 3545021..3545215 | + | 195 | WP_032209988.1 | hypothetical protein | - |
| JI426_RS17810 (3545289) | 3545289..3545453 | + | 165 | WP_032209977.1 | hypothetical protein | - |
| JI426_RS17815 (3545641) | 3545641..3545859 | + | 219 | WP_032209975.1 | hypothetical protein | - |
| JI426_RS17820 (3545977) | 3545977..3546240 | - | 264 | WP_047084234.1 | ogr/Delta-like zinc finger family protein | - |
| JI426_RS17825 (3546278) | 3546278..3547330 | - | 1053 | WP_001561226.1 | phage portal protein | - |
| JI426_RS17830 (3547327) | 3547327..3549132 | - | 1806 | WP_032210035.1 | terminase family protein | - |
| JI426_RS17835 (3549298) | 3549298..3550347 | + | 1050 | WP_047084233.1 | GPO family capsid scaffolding protein | - |
| JI426_RS17840 (3550359) | 3550359..3551378 | + | 1020 | WP_047084232.1 | phage major capsid protein, P2 family | - |
| JI426_RS17845 (3551396) | 3551396..3552094 | + | 699 | WP_047084231.1 | phage terminase small subunit | - |
| JI426_RS17850 (3552202) | 3552202..3552675 | + | 474 | WP_001294847.1 | head completion/stabilization protein | - |
| JI426_RS17855 (3552672) | 3552672..3553145 | + | 474 | WP_047084230.1 | phage tail protein | - |
| JI426_RS17860 (3553142) | 3553142..3553852 | + | 711 | WP_000623204.1 | hypothetical protein | - |
| JI426_RS17865 (3553864) | 3553864..3555008 | + | 1145 | Protein_3516 | DUF2586 domain-containing protein | - |
| JI426_RS17870 (3555010) | 3555010..3555471 | + | 462 | WP_032209967.1 | DUF2597 family protein | - |
| JI426_RS17875 (3555476) | 3555476..3555781 | + | 306 | WP_001112746.1 | holin | - |
| JI426_RS17880 (3555771) | 3555771..3556523 | + | 753 | WP_000149054.1 | site-specific DNA-methyltransferase | - |
| JI426_RS17885 (3556523) | 3556523..3556861 | + | 339 | WP_032209966.1 | M15 family metallopeptidase | - |
| JI426_RS17890 (3556858) | 3556858..3557244 | + | 387 | WP_032209964.1 | hypothetical protein | - |
| JI426_RS17895 (3557344) | 3557344..3557619 | + | 276 | WP_000208708.1 | putative phage tail assembly chaperone | - |
| JI426_RS17900 (3557583) | 3557583..3557810 | - | 228 | WP_157909552.1 | hypothetical protein | - |
| JI426_RS17905 (3557809) | 3557809..3559995 | + | 2187 | WP_032209963.1 | phage tail tape measure protein | - |
| JI426_RS17910 (3559992) | 3559992..3560342 | + | 351 | WP_001095857.1 | DUF2590 family protein | - |
| JI426_RS17915 (3560320) | 3560320..3561504 | + | 1185 | WP_032209962.1 | baseplate J/gp47 family protein | - |
| JI426_RS17920 (3561497) | 3561497..3562045 | + | 549 | WP_032209961.1 | phage tail protein | - |
| JI426_RS17925 (3562068) | 3562068..3564128 | + | 2061 | WP_137530945.1 | phage tail protein | - |
| JI426_RS17930 (3564128) | 3564128..3564724 | + | 597 | WP_032209958.1 | tail fiber assembly protein | - |
| JI426_RS17935 (3564736) | 3564736..3565461 | + | 726 | WP_032209955.1 | hypothetical protein | - |
| JI426_RS17940 (3565433) | 3565433..3565975 | + | 543 | WP_000083772.1 | hypothetical protein | - |
| JI426_RS17945 (3565978) | 3565978..3567651 | + | 1674 | WP_032209952.1 | hypothetical protein | - |
| JI426_RS17950 (3568067) | 3568067..3568357 | + | 291 | WP_224083737.1 | hypothetical protein | - |
| JI426_RS17955 (3568513) | 3568513..3568653 | + | 141 | WP_032209947.1 | Hok/Gef family protein | - |
| JI426_RS17960 (3568985) | 3568985..3569125 | + | 141 | WP_032209945.1 | Hok/Gef family protein | - |
| JI426_RS17965 (3569458) | 3569458..3569598 | + | 141 | WP_001135720.1 | Hok/Gef family protein | - |
| JI426_RS17970 (3569839) | 3569839..3571131 | - | 1293 | WP_000886683.1 | serine--tRNA ligase | - |
| JI426_RS17975 (3571222) | 3571222..3572565 | - | 1344 | WP_000067751.1 | replication-associated recombination protein RarA | - |
| JI426_RS17980 (3572576) | 3572576..3573187 | - | 612 | WP_001295343.1 | outer membrane lipoprotein chaperone LolA | - |
| JI426_RS17985 (3573346) | 3573346..3577413 | - | 4068 | WP_065225549.1 | DNA translocase FtsK | - |
| JI426_RS17990 (3577548) | 3577548..3578042 | - | 495 | WP_000228473.1 | leucine-responsive transcriptional regulator Lrp | - |
| JI426_RS17995 (3578587) | 3578587..3579552 | + | 966 | WP_000537418.1 | thioredoxin-disulfide reductase | - |
| JI426_RS18000 (3579675) | 3579675..3581441 | + | 1767 | WP_001043587.1 | cysteine/glutathione ABC transporter permease/ATP-binding protein CydD | - |
| JI426_RS18005 (3581442) | 3581442..3583163 | + | 1722 | WP_001202188.1 | cysteine/glutathione ABC transporter ATP-binding protein/permease CydC | - |
| JI426_RS18010 (3583205) | 3583205..3583909 | + | 705 | WP_001241678.1 | leucyl/phenylalanyl-tRNA--protein transferase | - |
| JI426_RS18015 (3584194) | 3584194..3584412 | + | 219 | WP_001040187.1 | translation initiation factor IF-1 | - |
| JI426_RS18025 (3585097) | 3585097..3587373 | - | 2277 | WP_000934041.1 | ATP-dependent Clp protease ATP-binding subunit ClpA | - |
| JI426_RS18030 (3587404) | 3587404..3587724 | - | 321 | WP_000520781.1 | ATP-dependent Clp protease adapter ClpS | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|