MGE detailed information
MGE type: Prophage MGE length: 46720 bp
Accession: NZ_CP064334 Location: 1310356..1357075 Organism: Xylella fastidiosa subsp. fastidiosa strain Bakersfield-8 Replicon: chromosome
Accession: NZ_CP064334 Location: 1310356..1357075 Organism: Xylella fastidiosa subsp. fastidiosa strain Bakersfield-8 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IUD20_RS05855 () | 1305684..1306469 | + | 786 | WP_004087362.1 | YggS family pyridoxal phosphate-dependent enzyme | - |
| IUD20_RS05860 () | 1306506..1309112 | - | 2607 | WP_004087363.1 | DNA mismatch repair protein MutS | - |
| IUD20_RS05865 () | 1309545..1310276 | - | 732 | WP_012382616.1 | monofunctional biosynthetic peptidoglycan transglycosylase | - |
| IUD20_RS05870 () | 1310356..1311216 | + | 861 | WP_004087365.1 | Hsp33 family molecular chaperone HslO | - |
| IUD20_RS05875 () | 1311421..1312239 | + | 819 | WP_173391712.1 | hypothetical protein | - |
| IUD20_RS05885 () | 1313012..1313356 | - | 345 | WP_004084923.1 | RidA family protein | - |
| IUD20_RS05890 () | 1313559..1313891 | - | 333 | WP_004088648.1 | DNA-binding transcriptional regulator | - |
| IUD20_RS05895 () | 1314083..1315165 | - | 1083 | WP_011097927.1 | phage late control D family protein | - |
| IUD20_RS05900 () | 1315156..1315374 | - | 219 | WP_004088371.1 | tail protein X | - |
| IUD20_RS05905 () | 1315371..1315853 | - | 483 | WP_011097928.1 | phage tail protein | - |
| IUD20_RS05910 () | 1315850..1318069 | - | 2220 | WP_011097929.1 | phage tail tape measure protein | - |
| IUD20_RS05915 () | 1318196..1318483 | - | 288 | WP_011097930.1 | phage tail assembly protein | - |
| IUD20_RS05920 () | 1318486..1318995 | - | 510 | WP_004086986.1 | phage major tail tube protein | - |
| IUD20_RS05925 () | 1318995..1320173 | - | 1179 | WP_011097931.1 | phage tail sheath family protein | - |
| IUD20_RS05930 () | 1320238..1321830 | - | 1593 | WP_012382617.1 | tail fiber domain-containing protein | - |
| IUD20_RS05935 () | 1321838..1322395 | - | 558 | WP_011097610.1 | phage tail protein I | - |
| IUD20_RS05940 () | 1322388..1323280 | - | 893 | Protein_1151 | baseplate J/gp47 family protein | - |
| IUD20_RS05945 () | 1323280..1323618 | - | 339 | WP_004090694.1 | GPW/gp25 family protein | - |
| IUD20_RS05950 () | 1323768..1324031 | + | 264 | WP_004090907.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| IUD20_RS05955 () | 1324018..1324299 | + | 282 | WP_004090909.1 | type II toxin-antitoxin system YafQ family toxin | Toxin Detail |
| IUD20_RS05960 () | 1324336..1324923 | - | 588 | WP_011097612.1 | phage baseplate assembly protein V | - |
| IUD20_RS05965 () | 1324920..1325462 | - | 543 | WP_011097613.1 | hypothetical protein | - |
| IUD20_RS05970 () | 1325438..1325959 | - | 522 | WP_011097614.1 | hypothetical protein | - |
| IUD20_RS05975 () | 1325956..1326279 | - | 324 | WP_012382618.1 | hypothetical protein | - |
| IUD20_RS05980 () | 1326279..1326539 | - | 261 | WP_012382619.1 | hypothetical protein | - |
| IUD20_RS05985 () | 1326557..1328431 | - | 1875 | WP_012382620.1 | phage major capsid protein | - |
| IUD20_RS05990 () | 1328428..1330014 | - | 1587 | WP_012382621.1 | phage portal protein | - |
| IUD20_RS05995 () | 1330011..1330562 | - | 552 | WP_004088901.1 | hypothetical protein | - |
| IUD20_RS06000 () | 1330566..1332518 | - | 1953 | WP_004088899.1 | phage terminase large subunit family protein | - |
| IUD20_RS06005 () | 1332511..1333086 | - | 576 | WP_011097938.1 | terminase small subunit | - |
| IUD20_RS06010 () | 1333217..1333441 | - | 225 | WP_012382622.1 | hypothetical protein | - |
| IUD20_RS06015 () | 1333443..1333904 | - | 462 | WP_011097939.1 | hypothetical protein | - |
| IUD20_RS06020 () | 1333894..1334223 | - | 330 | WP_004086884.1 | phage holin family protein | - |
| IUD20_RS06025 () | 1334216..1334710 | - | 495 | WP_011097941.1 | lysozyme | - |
| IUD20_RS06030 () | 1334677..1335294 | - | 618 | WP_011097942.1 | hypothetical protein | - |
| IUD20_RS06035 () | 1335713..1338244 | - | 2532 | WP_012382624.1 | primase | - |
| IUD20_RS06040 () | 1338380..1338946 | - | 567 | WP_011097944.1 | Bro-N domain-containing protein | - |
| IUD20_RS06045 () | 1338943..1339329 | - | 387 | WP_011097945.1 | phage antirepressor | - |
| IUD20_RS06050 () | 1339326..1339712 | - | 387 | WP_011097946.1 | hypothetical protein | - |
| IUD20_RS06055 () | 1339709..1339993 | - | 285 | Protein_1174 | hypothetical protein | - |
| IUD20_RS06060 () | 1340208..1340478 | - | 271 | Protein_1175 | hypothetical protein | - |
| IUD20_RS06065 () | 1340475..1340732 | - | 258 | WP_080729500.1 | hypothetical protein | - |
| IUD20_RS06070 () | 1340963..1341208 | - | 246 | WP_012382627.1 | hypothetical protein | - |
| IUD20_RS06075 () | 1341269..1341517 | - | 249 | WP_011097950.1 | hypothetical protein | - |
| IUD20_RS06080 () | 1341514..1341702 | - | 189 | WP_012382629.1 | hypothetical protein | - |
| IUD20_RS06085 () | 1341756..1342322 | - | 567 | WP_012382630.1 | hypothetical protein | - |
| IUD20_RS06090 () | 1342312..1342572 | - | 261 | WP_012382631.1 | helix-turn-helix domain-containing protein | - |
| IUD20_RS06095 () | 1342658..1343416 | + | 759 | WP_011097952.1 | helix-turn-helix transcriptional regulator | - |
| IUD20_RS06100 () | 1343577..1344116 | + | 540 | WP_011097953.1 | hypothetical protein | - |
| IUD20_RS06105 () | 1344139..1344348 | + | 210 | WP_012382632.1 | hypothetical protein | - |
| IUD20_RS06110 () | 1344402..1344785 | + | 384 | WP_012382633.1 | hypothetical protein | - |
| IUD20_RS06115 () | 1345003..1345392 | + | 390 | WP_011097955.1 | hypothetical protein | - |
| IUD20_RS06120 () | 1345389..1345853 | + | 465 | WP_011097956.1 | DUF1566 domain-containing protein | - |
| IUD20_RS06125 () | 1345910..1346392 | - | 483 | WP_004088357.1 | hypothetical protein | - |
| IUD20_RS06130 () | 1346692..1346883 | + | 192 | WP_012382634.1 | hypothetical protein | - |
| IUD20_RS06135 () | 1346907..1347098 | + | 192 | WP_012382635.1 | hypothetical protein | - |
| IUD20_RS06140 () | 1347130..1347327 | + | 198 | WP_004090711.1 | hypothetical protein | - |
| IUD20_RS06145 () | 1347379..1347810 | + | 432 | WP_194957380.1 | hypothetical protein | - |
| IUD20_RS06150 () | 1347807..1349084 | + | 1278 | WP_012382637.1 | DUF2800 domain-containing protein | - |
| IUD20_RS06155 () | 1349084..1349650 | + | 567 | WP_004090881.1 | DUF2815 family protein | - |
| IUD20_RS06160 () | 1349737..1351248 | + | 1512 | WP_011097960.1 | hypothetical protein | - |
| IUD20_RS06165 () | 1351250..1353430 | + | 2181 | WP_011097961.1 | DNA polymerase | - |
| IUD20_RS06170 () | 1353427..1353705 | + | 279 | WP_011097962.1 | VRR-NUC domain-containing protein | - |
| IUD20_RS06175 () | 1353707..1354153 | - | 447 | WP_012382639.1 | DUF1640 domain-containing protein | - |
| IUD20_RS06180 () | 1354238..1355656 | + | 1419 | WP_011097964.1 | DEAD/DEAH box helicase | - |
| IUD20_RS06185 () | 1355653..1355817 | + | 165 | WP_012382640.1 | hypothetical protein | - |
| IUD20_RS06190 () | 1355810..1356067 | + | 258 | WP_011097965.1 | DUF4224 domain-containing protein | - |
| IUD20_RS06195 () | 1356057..1357075 | + | 1019 | Protein_1202 | Tyrosine recombinase XerC ; Integrase | Integrase |
| IUD20_RS06200 () | 1357439..1360030 | + | 2592 | WP_004087286.1 | bifunctional lysylphosphatidylglycerol flippase/synthetase MprF | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|