MGE detailed information
MGE type: Prophage MGE length: 79274 bp
Accession: NZ_CP063499 Location: 1223448..1302721 Organism: Escherichia coli strain EH10-18-47 Replicon: chromosome
Accession: NZ_CP063499 Location: 1223448..1302721 Organism: Escherichia coli strain EH10-18-47 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IQS20_RS05780 () | 1218850..1220055 | - | 1206 | WP_001206197.1 | bifunctional 3-oxoadipyl-CoA/3-oxo-5,6-dehydrosuberyl-CoA thiolase | - |
| IQS20_RS05785 () | 1220055..1220477 | - | 423 | WP_000018413.1 | hydroxyphenylacetyl-CoA thioesterase PaaI | - |
| IQS20_RS05790 () | 1220467..1221894 | - | 1428 | WP_000973371.1 | 3-hydroxyacyl-CoA dehydrogenase PaaC | - |
| IQS20_RS05795 () | 1221896..1222684 | - | 789 | WP_000969784.1 | 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase PaaG | - |
| IQS20_RS05800 () | 1222684..1223451 | - | 768 | WP_001292353.1 | 2,3-dehydroadipyl-CoA hydratase | - |
| IQS20_RS05805 () | 1223448..1224518 | - | 1071 | WP_000206388.1 | phenylacetate-CoA oxygenase/reductase subunit PaaK | - |
| IQS20_RS05810 () | 1224526..1225023 | - | 498 | WP_001189201.1 | phenylacetate degradation protein PaaD | - |
| IQS20_RS05815 () | 1225038..1225784 | - | 747 | WP_001072837.1 | phenylacetate-CoA oxygenase subunit PaaC | - |
| IQS20_RS05820 () | 1225793..1226080 | - | 288 | WP_000073393.1 | 1,2-phenylacetyl-CoA epoxidase subunit B | - |
| IQS20_RS05825 () | 1226092..1227021 | - | 930 | WP_000191077.1 | 1,2-phenylacetyl-CoA epoxidase subunit A | - |
| IQS20_RS05830 () | 1227306..1229351 | + | 2046 | WP_096282762.1 | phenylacetic acid degradation bifunctional protein PaaZ | - |
| IQS20_RS05835 () | 1229598..1231871 | + | 2274 | WP_096282760.1 | primary-amine oxidase | - |
| IQS20_RS05840 () | 1231929..1233428 | - | 1500 | WP_000138615.1 | phenylacetaldehyde dehydrogenase | - |
| IQS20_RS05845 () | 1233664..1234569 | + | 906 | WP_001067519.1 | transcriptional regulator FeaR | - |
| IQS20_RS05850 () | 1234741..1235067 | - | 327 | WP_001300734.1 | YdbL family protein | - |
| IQS20_RS05855 () | 1235075..1235260 | - | 186 | WP_000698145.1 | YnbE family lipoprotein | - |
| IQS20_RS05860 () | 1235257..1237896 | - | 2640 | WP_000900943.1 | YdbH family protein | - |
| IQS20_RS05865 () | 1238104..1239093 | + | 990 | WP_000762236.1 | D-lactate dehydrogenase | - |
| IQS20_RS05870 () | 1239198..1239895 | - | 698 | Protein_1150 | IS1 family transposase IS1R | Transposase |
| IQS20_RS05875 () | 1239981..1240403 | + | 423 | WP_001298828.1 | heat shock protein HslJ | - |
| IQS20_RS05880 () | 1240400..1240666 | - | 267 | WP_001295715.1 | DUF333 domain-containing protein | - |
| IQS20_RS05885 () | 1240940..1244464 | + | 3525 | WP_000628243.1 | pyruvate:ferredoxin (flavodoxin) oxidoreductase | - |
| IQS20_RS05890 () | 1244831..1245484 | + | 654 | Protein_1154 | hypothetical protein | VF |
| IQS20_RS05895 () | 1245550..1246712 | + | 1163 | WP_085947771.1 | IS3 family transposase IS3 | Transposase |
| IQS20_RS05900 () | 1246740..1247225 | + | 486 | Protein_1156 | porin OmpN | - |
| IQS20_RS05905 () | 1247366..1247800 | + | 435 | WP_001300461.1 | universal stress protein UspF | - |
| IQS20_RS05910 () | 1248233..1248930 | + | 698 | Protein_1158 | IS1 family transposase IS1R | Transposase |
| IQS20_RS05915 () | 1249356..1249469 | + | 114 | WP_120795384.1 | hypothetical protein | - |
| IQS20_RS05920 () | 1249538..1249771 | + | 234 | WP_087599266.1 | cold shock protein YdfK | - |
| IQS20_RS05925 () | 1250088..1250678 | + | 591 | WP_000086527.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| IQS20_RS05930 () | 1250776..1251351 | - | 576 | WP_000885587.1 | tail fiber assembly protein | - |
| IQS20_RS05935 () | 1251351..1254701 | - | 3351 | WP_096282804.1 | prophage tail fiber N-terminal domain-containing protein | - |
| IQS20_RS05940 () | 1254766..1255364 | - | 599 | Protein_1164 | 3-isopropylmalate dehydratase large subunit | VF |
| IQS20_RS05945 () | 1255431..1258829 | - | 3399 | WP_096282806.1 | host specificity protein J | - |
| IQS20_RS05950 () | 1258890..1259537 | - | 648 | WP_000741591.1 | tail assembly protein | - |
| IQS20_RS05955 () | 1259435..1260178 | - | 744 | WP_001379783.1 | C40 family peptidase | - |
| IQS20_RS05960 () | 1260184..1260882 | - | 699 | WP_001152422.1 | phage minor tail protein L | - |
| IQS20_RS05965 () | 1260882..1261220 | - | 339 | WP_000024051.1 | phage tail protein | - |
| IQS20_RS05970 () | 1261213..1264446 | - | 3234 | WP_203161125.1 | phage tail tape measure protein | - |
| IQS20_RS05975 () | 1264920..1265279 | - | 360 | WP_012565075.1 | hypothetical protein | - |
| IQS20_RS05980 () | 1265430..1266392 | - | 963 | WP_096282810.1 | hypothetical protein | - |
| IQS20_RS05985 () | 1266419..1266811 | - | 393 | WP_000673077.1 | hypothetical protein | - |
| IQS20_RS05990 () | 1266808..1267188 | - | 381 | WP_001029819.1 | hypothetical protein | - |
| IQS20_RS05995 () | 1267189..1267572 | - | 384 | WP_000524260.1 | hypothetical protein | - |
| IQS20_RS06000 () | 1267572..1267967 | - | 396 | WP_000634214.1 | hypothetical protein | - |
| IQS20_RS06005 () | 1267971..1268147 | - | 177 | WP_096148534.1 | hypothetical protein | - |
| IQS20_RS06010 () | 1268190..1269329 | - | 1140 | WP_000918487.1 | hypothetical protein | - |
| IQS20_RS06015 () | 1269428..1270192 | - | 765 | WP_000770042.1 | hypothetical protein | - |
| IQS20_RS06020 () | 1270297..1271409 | - | 1113 | WP_001363932.1 | hypothetical protein | - |
| IQS20_RS06025 () | 1271393..1272799 | - | 1407 | WP_072796014.1 | DUF4055 domain-containing protein | - |
| IQS20_RS06030 () | 1272802..1274103 | - | 1302 | WP_000625348.1 | terminase family protein | - |
| IQS20_RS06035 () | 1274084..1275178 | - | 1095 | WP_000089447.1 | terminase small subunit | - |
| IQS20_RS06040 () | 1275182..1275433 | - | 252 | WP_000613571.1 | hypothetical protein | - |
| IQS20_RS06045 () | 1275369..1276301 | - | 933 | WP_001204028.1 | hypothetical protein | - |
| IQS20_RS06050 () | 1276294..1277085 | - | 792 | WP_001291105.1 | ParB/Srx family N-terminal domain-containing protein | - |
| IQS20_RS06055 () | 1277223..1278680 | - | 1458 | WP_203161126.1 | TrkH family potassium uptake protein | - |
| IQS20_RS06060 () | 1278877..1278978 | - | 102 | Protein_1188 | Rz1 family lipoprotein | - |
| IQS20_RS06065 () | 1279069..1280231 | + | 1163 | WP_085947771.1 | IS3 family transposase IS3 | Transposase |
| IQS20_RS06070 () | 1280262..1280543 | - | 282 | Protein_1190 | lysis protein | - |
| IQS20_RS06075 () | 1280540..1281037 | - | 498 | WP_016261931.1 | lysozyme RrrD | - |
| IQS20_RS06080 () | 1281037..1281252 | - | 216 | WP_000839565.1 | phage lysis protein EssD | - |
| IQS20_RS06085 () | 1281504..1281878 | - | 375 | WP_001348108.1 | hypothetical protein | - |
| IQS20_RS06090 () | 1282050..1282478 | - | 429 | WP_000506936.1 | cell envelope integrity protein TolA | - |
| IQS20_RS06095 () | 1283522..1284064 | - | 543 | WP_040062257.1 | DUF1133 family protein | - |
| IQS20_RS06100 () | 1284061..1284351 | - | 291 | WP_040062258.1 | DUF1364 domain-containing protein | - |
| IQS20_RS06105 () | 1284351..1284950 | - | 600 | WP_040062259.1 | DUF1367 family protein | - |
| IQS20_RS06110 () | 1285458..1286570 | + | 1113 | WP_001300563.1 | IS4 family transposase IS421 | Transposase |
| IQS20_RS06115 () | 1286764..1286919 | - | 156 | WP_096282653.1 | type I toxin-antitoxin system toxin HokD | - |
| IQS20_RS06120 () | 1286991..1287278 | - | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| IQS20_RS06125 () | 1287278..1287517 | - | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| IQS20_RS06130 () | 1287542..1287847 | + | 306 | WP_071593935.1 | hypothetical protein | - |
| IQS20_RS06135 () | 1288050..1288382 | + | 333 | WP_001301033.1 | protein FlxA | - |
| IQS20_RS06140 () | 1288594..1289291 | - | 698 | Protein_1204 | IS1 family transposase IS1R | Transposase |
| IQS20_RS06145 () | 1289349..1290194 | + | 846 | Protein_1205 | ADP-dependent (S)-NAD(P)H-hydrate dehydratase ; Integrase | Integrase |
| IQS20_RS06150 () | 1290246..1291181 | + | 936 | WP_001157406.1 | tRNA 2-thiocytidine(32) synthetase TtcA | - |
| IQS20_RS06155 () | 1291310..1292683 | - | 1374 | WP_000123737.1 | ATP-dependent RNA helicase DbpA | - |
| IQS20_RS06160 () | 1293161..1294144 | - | 984 | WP_000387388.1 | zinc transporter ZntB | - |
| IQS20_RS06165 () | 1294399..1295631 | + | 1233 | WP_000628058.1 | diguanylate cyclase DgcM | - |
| IQS20_RS06170 () | 1295652..1296215 | - | 564 | WP_001046829.1 | DNA endonuclease SmrA | - |
| IQS20_RS06175 () | 1296356..1297053 | - | 698 | Protein_1211 | IS1 family transposase IS1R | Transposase |
| IQS20_RS06180 () | 1297322..1298230 | - | 909 | WP_000885454.1 | LysR family transcriptional regulator | - |
| IQS20_RS06185 () | 1298406..1299716 | + | 1311 | WP_000444929.1 | p-aminobenzoyl-glutamate hydrolase subunit AbgA | - |
| IQS20_RS06190 () | 1299716..1301161 | + | 1446 | WP_001156412.1 | p-aminobenzoyl-glutamate hydrolase subunit AbgB | - |
| IQS20_RS06195 () | 1301195..1302721 | + | 1527 | WP_000062967.1 | p-aminobenzoyl-glutamate transporter | - |
| IQS20_RS06200 () | 1302732..1303247 | + | 516 | WP_000945011.1 | methylated-DNA--[protein]-cysteine S-methyltransferase | - |
| IQS20_RS06205 () | 1303442..1304194 | + | 753 | WP_000611911.1 | fumarate/nitrate reduction transcriptional regulator Fnr | - |
| IQS20_RS06210 () | 1304346..1305296 | + | 951 | WP_001262123.1 | universal stress protein UspE | - |
| IQS20_RS06215 () | 1305346..1305603 | - | 258 | WP_000605090.1 | DUF2534 family protein | - |
| IQS20_RS06220 () | 1305847..1306878 | + | 1032 | WP_000559900.1 | low conductance mechanosensitive channel YnaI | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|