MGE detailed information
MGE type: Genomic_island MGE length: 30566 bp
Accession: NZ_CP063483 Location: 4735345..4765910 Organism: Escherichia coli strain EM03-18-08 Replicon: chromosome
Accession: NZ_CP063483 Location: 4735345..4765910 Organism: Escherichia coli strain EM03-18-08 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IQS21_RS22660 () | 4730664..4731566 | - | 903 | WP_001300031.1 | type 1 fimbria D-mannose specific adhesin FimH | - |
| IQS21_RS22665 () | 4731586..4732089 | - | 504 | WP_000870590.1 | type 1 fimbria minor subunit FimG | - |
| IQS21_RS22670 () | 4732102..4732632 | - | 531 | WP_001244823.1 | type 1 fimbria minor subunit FimF | - |
| IQS21_RS22675 () | 4732642..4735278 | - | 2637 | WP_000120945.1 | fimbrial usher FimD | - |
| IQS21_RS22680 () | 4735345..4736070 | - | 726 | WP_000066560.1 | Chaperone protein FimC | VF |
| IQS21_RS22685 () | 4736107..4736646 | - | 540 | WP_000824114.1 | putative major fimbrial subunit LpfA | VF |
| IQS21_RS22690 () | 4736711..4737265 | - | 555 | WP_000695588.1 | Type-1 fimbrial protein, A chain | VF |
| IQS21_RS22695 () | 4737747..4738343 | - | 597 | WP_000044711.1 | Tyrosine recombinase XerD | VF |
| IQS21_RS22700 () | 4738820..4739422 | - | 603 | WP_000790583.1 | Tyrosine recombinase XerC | VF |
| IQS21_RS22705 () | 4740878..4741594 | + | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| IQS21_RS22710 () | 4741614..4742720 | + | 1107 | WP_001300022.1 | N-acetylneuraminate epimerase | - |
| IQS21_RS22715 () | 4742784..4743764 | + | 981 | WP_000991442.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| IQS21_RS22720 () | 4743772..4743894 | - | 123 | WP_001300013.1 | hypothetical protein | - |
| IQS21_RS22725 () | 4743976..4744848 | + | 873 | WP_000168555.1 | HNH endonuclease | - |
| IQS21_RS22730 () | 4744911..4746221 | - | 1311 | WP_000842794.1 | McrC family protein | - |
| IQS21_RS22735 () | 4746218..4748272 | - | 2055 | WP_000249525.1 | McrB family protein | - |
| IQS21_RS22740 () | 4748630..4749463 | - | 834 | WP_001192736.1 | DUF4942 domain-containing protein | - |
| IQS21_RS22745 () | 4749769..4751325 | + | 1557 | WP_000202817.1 | type I restriction-modification system subunit M | - |
| IQS21_RS22750 () | 4751322..4752072 | + | 751 | Protein_4428 | restriction endonuclease subunit S | - |
| IQS21_RS22755 () | 4752090..4752587 | + | 498 | WP_071587708.1 | restriction endonuclease subunit S | - |
| IQS21_RS22760 () | 4752709..4755825 | + | 3117 | WP_000149665.1 | HsdR family type I site-specific deoxyribonuclease | - |
| IQS21_RS22765 () | 4756313..4756459 | - | 147 | WP_001290178.1 | hypothetical protein | - |
| IQS21_RS22770 () | 4756544..4756741 | - | 198 | WP_001327226.1 | DUF957 domain-containing protein | - |
| IQS21_RS22775 () | 4756761..4757249 | - | 489 | WP_000761685.1 | hypothetical protein | - |
| IQS21_RS22780 () | 4757246..4757623 | - | 378 | WP_001094444.1 | TA system toxin CbtA family protein | Toxin Detail |
| IQS21_RS22785 () | 4757713..4758081 | - | 369 | WP_001285607.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| IQS21_RS22790 () | 4758161..4758382 | - | 222 | WP_000692350.1 | DUF987 domain-containing protein | - |
| IQS21_RS22795 () | 4758469..4758945 | - | 477 | WP_001384029.1 | RadC family protein | - |
| IQS21_RS22800 () | 4758960..4759445 | - | 486 | WP_000213722.1 | antirestriction protein | - |
| IQS21_RS22805 () | 4759537..4760355 | - | 819 | WP_001175175.1 | DUF945 domain-containing protein | - |
| IQS21_RS22810 () | 4760445..4760654 | - | 210 | WP_032150870.1 | DUF905 family protein | - |
| IQS21_RS22815 () | 4760684..4761361 | - | 678 | WP_001097301.1 | hypothetical protein | - |
| IQS21_RS22820 () | 4761481..4762365 | - | 885 | WP_000010408.1 | 50S ribosome-binding GTPase | - |
| IQS21_RS22825 () | 4762550..4763680 | + | 1131 | WP_047928958.1 | hypothetical protein | - |
| IQS21_RS22830 () | 4765179..4765910 | + | 732 | WP_021559487.1 | inovirus Gp2 family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|