MGE detailed information
MGE type: Prophage MGE length: 45698 bp
Accession: NZ_CP063349 Location: 1564767..1610464 Organism: Escherichia coli strain BS15R-A Replicon: chromosome
Accession: NZ_CP063349 Location: 1564767..1610464 Organism: Escherichia coli strain BS15R-A Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IN859_RS07430 () | 1560158..1560655 | + | 498 | WP_001297295.1 | chorismate lyase | - |
| IN859_RS07435 () | 1560668..1561540 | + | 873 | WP_000455228.1 | 4-hydroxybenzoate octaprenyltransferase | - |
| IN859_RS07440 () | 1561695..1564118 | - | 2424 | WP_000017354.1 | glycerol-3-phosphate 1-O-acyltransferase PlsB | - |
| IN859_RS07445 () | 1564289..1564657 | + | 369 | WP_000002907.1 | diacylglycerol kinase | - |
| IN859_RS07450 () | 1564767..1565375 | + | 609 | WP_000646078.1 | transcriptional repressor LexA | - |
| IN859_RS07455 () | 1565448..1566773 | + | 1326 | WP_001298861.1 | MATE family efflux transporter DinF | - |
| IN859_RS07460 () | 1566889..1567098 | + | 210 | WP_001030593.1 | CsbD family protein | - |
| IN859_RS07465 () | 1567140..1567655 | - | 516 | WP_001295691.1 | zinc uptake transcriptional repressor Zur | - |
| IN859_RS07470 () | 1567973..1568964 | + | 992 | Protein_1435 | DUF2713 family protein | - |
| IN859_RS07475 () | 1569328..1569450 | + | 123 | WP_001300034.1 | hypothetical protein | - |
| IN859_RS07480 () | 1569686..1570258 | + | 573 | WP_000458584.1 | SocA family protein | Antitoxin Detail |
| IN859_RS07485 () | 1570288..1570674 | + | 387 | WP_014640052.1 | hypothetical protein | Toxin Detail |
| IN859_RS07490 () | 1570714..1570887 | + | 174 | WP_000390072.1 | hypothetical protein | - |
| IN859_RS07495 () | 1570935..1571216 | - | 282 | WP_001093917.1 | pyocin activator PrtN family protein | - |
| IN859_RS07500 () | 1571253..1571825 | - | 573 | WP_001061348.1 | 3'-5' exoribonuclease | - |
| IN859_RS07505 () | 1571825..1572634 | - | 810 | WP_000206745.1 | hypothetical protein | - |
| IN859_RS07510 () | 1572634..1572996 | - | 363 | WP_130569182.1 | hypothetical protein | - |
| IN859_RS07515 () | 1572987..1573523 | - | 537 | WP_000008210.1 | 5'-deoxynucleotidase | - |
| IN859_RS07520 () | 1573651..1574475 | - | 825 | WP_151288104.1 | DUF2303 family protein | - |
| IN859_RS07525 () | 1574541..1574903 | - | 363 | WP_000135680.1 | hypothetical protein | - |
| IN859_RS07530 () | 1574918..1575228 | - | 311 | Protein_1447 | hypothetical protein | - |
| IN859_RS07535 () | 1575342..1575533 | + | 192 | WP_000159356.1 | hypothetical protein | - |
| IN859_RS07540 () | 1576108..1576794 | - | 687 | WP_000853321.1 | helix-turn-helix transcriptional regulator | - |
| IN859_RS07545 () | 1576932..1577180 | + | 249 | WP_000187186.1 | helix-turn-helix domain-containing protein | - |
| IN859_RS07550 () | 1577203..1577760 | + | 558 | WP_113417759.1 | hypothetical protein | - |
| IN859_RS07555 () | 1577936..1578115 | + | 180 | WP_071592653.1 | DUF4222 domain-containing protein | - |
| IN859_RS07560 () | 1578105..1579046 | + | 942 | WP_203008688.1 | helix-turn-helix domain-containing protein | - |
| IN859_RS07565 () | 1579043..1579537 | + | 495 | WP_074014899.1 | PerC family transcriptional regulator | - |
| IN859_RS07570 () | 1579537..1580190 | + | 654 | WP_000066917.1 | phage N-6-adenine-methyltransferase | - |
| IN859_RS07575 () | 1580187..1580513 | + | 327 | WP_000210154.1 | LexA family transcriptional regulator | - |
| IN859_RS07580 () | 1580510..1580899 | + | 390 | WP_000767133.1 | RusA family crossover junction endodeoxyribonuclease | - |
| IN859_RS07585 () | 1580919..1581727 | + | 809 | Protein_1458 | KilA-N domain-containing protein | - |
| IN859_RS07590 () | 1581735..1582724 | + | 990 | WP_203008640.1 | DUF968 domain-containing protein | - |
| IN859_RS07595 () | 1582738..1583490 | + | 753 | WP_001047106.1 | antitermination protein | - |
| IN859_RS07600 () | 1583641..1583898 | + | 258 | WP_032176015.1 | hypothetical protein | - |
| IN859_RS07605 () | 1584044..1584430 | + | 387 | WP_001283169.1 | phage holin family protein | - |
| IN859_RS07610 () | 1584417..1584698 | + | 282 | WP_000422366.1 | phage holin family protein | - |
| IN859_RS07615 () | 1584698..1585312 | + | 615 | WP_001542445.1 | glycoside hydrolase family 19 protein | - |
| IN859_RS07620 () | 1585309..1585701 | + | 393 | WP_124064293.1 | DUF2570 domain-containing protein | - |
| IN859_RS07625 () | 1585586..1585858 | + | 273 | WP_124064292.1 | peptidase | - |
| IN859_RS07630 () | 1585885..1586235 | + | 351 | WP_114474154.1 | HNH endonuclease | - |
| IN859_RS07635 () | 1586361..1586855 | + | 495 | WP_000929181.1 | phage terminase small subunit P27 family | - |
| IN859_RS07640 () | 1587089..1588585 | + | 1497 | WP_096859749.1 | terminase large subunit | - |
| IN859_RS07645 () | 1588582..1588743 | + | 162 | WP_000838376.1 | hypothetical protein | - |
| IN859_RS07650 () | 1588733..1589959 | + | 1227 | WP_203008648.1 | phage portal protein | - |
| IN859_RS07655 () | 1589952..1590554 | + | 603 | WP_000999805.1 | HK97 family phage prohead protease | - |
| IN859_RS07660 () | 1590565..1591794 | + | 1230 | WP_000766100.1 | phage major capsid protein | - |
| IN859_RS07665 () | 1591873..1592196 | + | 324 | WP_000924829.1 | head-tail connector protein | - |
| IN859_RS07670 () | 1592193..1592603 | + | 411 | WP_001767326.1 | phage head closure protein | - |
| IN859_RS07675 () | 1592578..1593084 | + | 507 | WP_052870228.1 | hypothetical protein | - |
| IN859_RS07680 () | 1593081..1593641 | + | 561 | WP_203008650.1 | hypothetical protein | - |
| IN859_RS07685 () | 1593650..1593820 | + | 171 | WP_000497751.1 | DUF2635 domain-containing protein | - |
| IN859_RS07690 () | 1593804..1595300 | + | 1497 | WP_205558689.1 | phage tail sheath subtilisin-like domain-containing protein | - |
| IN859_RS07695 () | 1595300..1595656 | + | 357 | WP_000090993.1 | phage tail tube protein | - |
| IN859_RS07700 () | 1595653..1595976 | + | 324 | WP_000571712.1 | phage tail assembly protein | - |
| IN859_RS07705 () | 1596061..1597962 | + | 1902 | WP_032277691.1 | phage tail tape measure protein | - |
| IN859_RS07710 () | 1598027..1598515 | + | 489 | WP_032277692.1 | hypothetical protein | - |
| IN859_RS07715 () | 1598572..1599945 | + | 1374 | WP_000347687.1 | DNA circularization N-terminal domain-containing protein | - |
| IN859_RS07720 () | 1599942..1601021 | + | 1080 | WP_205558690.1 | baseplate protein | - |
| IN859_RS07725 () | 1601021..1601569 | + | 549 | WP_194152716.1 | phage baseplate assembly protein V | - |
| IN859_RS07730 () | 1601569..1601994 | + | 426 | WP_000424747.1 | phage GP46 family protein | - |
| IN859_RS07735 () | 1601981..1603039 | + | 1059 | WP_205558691.1 | baseplate J/gp47 family protein | - |
| IN859_RS07740 () | 1603030..1603614 | + | 585 | WP_203008673.1 | YmfQ family protein | - |
| IN859_RS07745 () | 1603618..1604256 | + | 639 | WP_203008675.1 | hypothetical protein | - |
| IN859_RS07750 () | 1604258..1604677 | + | 420 | WP_203008677.1 | tail fiber assembly protein | - |
| IN859_RS07755 () | 1604649..1605092 | - | 444 | WP_203008679.1 | tail fiber assembly protein | - |
| IN859_RS07760 () | 1605094..1605513 | - | 420 | WP_203008681.1 | hypothetical protein | - |
| IN859_RS07765 () | 1605512..1605631 | + | 120 | Protein_1494 | Tn3 family transposase TnpR_ISAzs17 | Transposase |
| IN859_RS07775 () | 1606965..1607411 | + | 447 | Protein_1496 | Tn3 family transposase TnpR_ISPa38 | Transposase |
| IN859_RS07780 () | 1607555..1607803 | - | 249 | WP_001217553.1 | DinI-like family protein | - |
| IN859_RS07785 () | 1607865..1608962 | - | 1098 | WP_063085548.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| IN859_RS07790 () | 1609051..1610088 | + | 1038 | WP_000543828.1 | tRNA dihydrouridine(20/20a) synthase DusA | - |
| IN859_RS07795 () | 1610222..1610464 | + | 243 | WP_000891402.1 | envelope stress response protein PspG | - |
| IN859_RS07800 () | 1610630..1611613 | - | 984 | WP_000235509.1 | quinone oxidoreductase | - |
| IN859_RS07805 () | 1611696..1613111 | + | 1416 | WP_000918363.1 | replicative DNA helicase | - |
| IN859_RS07810 () | 1613164..1614243 | + | 1080 | WP_001147328.1 | alanine racemase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|