MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 87945 bp
Accession: NZ_CP062940 Location: 2121484..2209428 Organism: Bifidobacterium longum subsp. longum strain JCM 11343 Replicon: chromosome
Accession: NZ_CP062940 Location: 2121484..2209428 Organism: Bifidobacterium longum subsp. longum strain JCM 11343 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BL1343_RS08945 () | 2117888..2118874 | + | 987 | WP_007051920.1 | TerC family protein | - |
| BL1343_RS08950 () | 2119042..2120484 | + | 1443 | WP_010081697.1 | pyruvate kinase | - |
| BL1343_RS08955 () | 2120632..2121231 | - | 600 | WP_007051922.1 | NUDIX hydrolase | - |
| BL1343_RS08965 () | 2122070..2122309 | + | 240 | WP_161595126.1 | helix-turn-helix transcriptional regulator | - |
| BL1343_RS08970 () | 2122306..2122731 | + | 426 | WP_193107938.1 | hypothetical protein | - |
| BL1343_RS08975 () | 2122807..2123307 | - | 501 | WP_193107939.1 | hypothetical protein | - |
| BL1343_RS08980 () | 2123588..2124823 | + | 1236 | WP_193107940.1 | hypothetical protein | - |
| BL1343_RS08985 () | 2124874..2126010 | + | 1137 | WP_193107941.1 | DUF2637 domain-containing protein | - |
| BL1343_RS08990 () | 2126013..2126990 | + | 978 | WP_193107942.1 | hypothetical protein | - |
| BL1343_RS08995 () | 2126987..2127442 | + | 456 | WP_193107943.1 | hypothetical protein | - |
| BL1343_RS09000 () | 2127483..2127701 | + | 219 | WP_007057039.1 | hypothetical protein | - |
| BL1343_RS09005 () | 2127691..2127852 | + | 162 | WP_165507238.1 | hypothetical protein | - |
| BL1343_RS09010 () | 2127849..2129249 | + | 1401 | WP_131207928.1 | helix-turn-helix domain-containing protein | - |
| BL1343_RS09015 () | 2129396..2130211 | - | 816 | WP_007051933.1 | GNAT family N-acetyltransferase | - |
| BL1343_RS09020 () | 2130431..2130850 | + | 420 | WP_193107944.1 | hypothetical protein | - |
| BL1343_RS09025 () | 2130952..2131437 | - | 486 | WP_032684594.1 | hypothetical protein | - |
| BL1343_RS09030 () | 2132099..2132497 | + | 399 | WP_032737861.1 | IS3 family transposase ISClte1 | Transposase |
| BL1343_RS09035 () | 2132494..2132784 | + | 291 | WP_032746211.1 | hypothetical protein | - |
| BL1343_RS09040 () | 2132781..2133317 | + | 537 | WP_117793169.1 | hypothetical protein | - |
| BL1343_RS09045 () | 2133314..2133499 | + | 186 | WP_032737858.1 | hypothetical protein | - |
| BL1343_RS09050 () | 2133496..2133984 | + | 489 | WP_193107945.1 | hypothetical protein | - |
| BL1343_RS09055 () | 2134006..2134986 | - | 981 | WP_100969586.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | - |
| BL1343_RS09060 () | 2134973..2135524 | - | 552 | WP_032684719.1 | hypothetical protein | - |
| BL1343_RS09065 () | 2135611..2136498 | - | 888 | WP_077384637.1 | hypothetical protein | - |
| BL1343_RS09070 () | 2136590..2138242 | + | 1653 | WP_117717181.1 | ATP-dependent DNA helicase | - |
| BL1343_RS09075 () | 2138239..2139165 | + | 927 | WP_193107946.1 | helix-turn-helix domain-containing protein | - |
| BL1343_RS09080 () | 2139267..2139746 | - | 480 | WP_180950760.1 | GNAT family N-acetyltransferase | - |
| BL1343_RS09085 () | 2139743..2140012 | - | 270 | WP_032735325.1 | DUF1778 domain-containing protein | - |
| BL1343_RS09090 () | 2140131..2140577 | - | 447 | WP_032735165.1 | helix-turn-helix domain-containing protein | - |
| BL1343_RS09095 () | 2141162..2142001 | + | 840 | WP_032735163.1 | hypothetical protein | - |
| BL1343_RS09100 () | 2142001..2142651 | + | 651 | WP_101629039.1 | class II glutamine amidotransferase | - |
| BL1343_RS09105 () | 2143126..2143704 | + | 579 | WP_193107947.1 | DUF4192 family protein | - |
| BL1343_RS09110 () | 2143777..2144313 | + | 537 | WP_007053530.1 | hypothetical protein | - |
| BL1343_RS09115 () | 2144851..2145045 | + | 195 | WP_007051954.1 | hypothetical protein | - |
| BL1343_RS09120 () | 2145101..2145316 | + | 216 | WP_118393996.1 | hypothetical protein | - |
| BL1343_RS09125 () | 2145380..2145781 | + | 402 | WP_007051956.1 | DUF3846 domain-containing protein | - |
| BL1343_RS09130 () | 2146109..2146696 | + | 588 | WP_007051957.1 | hypothetical protein | - |
| BL1343_RS09135 () | 2146808..2147374 | + | 567 | WP_193107948.1 | single-stranded DNA-binding protein | - |
| BL1343_RS09140 () | 2147446..2147844 | + | 399 | WP_077384645.1 | hypothetical protein | - |
| BL1343_RS09145 () | 2147850..2148266 | + | 417 | WP_177700701.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | - |
| BL1343_RS09150 () | 2148263..2148580 | + | 318 | WP_077384646.1 | hypothetical protein | - |
| BL1343_RS09155 () | 2149048..2149209 | + | 162 | WP_007057407.1 | hypothetical protein | - |
| BL1343_RS09160 () | 2149326..2149634 | + | 309 | WP_080785058.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| BL1343_RS09165 () | 2150827..2151513 | + | 687 | WP_193107949.1 | hypothetical protein | - |
| BL1343_RS09170 () | 2151690..2152262 | + | 573 | WP_131212951.1 | hypothetical protein | - |
| BL1343_RS09175 () | 2152247..2156080 | + | 3834 | WP_193107950.1 | conjugative relaxase TrwC/TraI family protein | - |
| BL1343_RS09180 () | 2156095..2156316 | - | 222 | WP_193107951.1 | hypothetical protein | - |
| BL1343_RS09185 () | 2156414..2157520 | + | 1107 | WP_193107834.1 | IS30 family transposase ISBlo7 | Transposase |
| BL1343_RS09190 () | 2157584..2157961 | - | 378 | WP_100985759.1 | hypothetical protein | - |
| BL1343_RS09195 () | 2157958..2158746 | - | 789 | WP_193107952.1 | hypothetical protein | - |
| BL1343_RS09200 () | 2158776..2159981 | - | 1206 | WP_193107953.1 | hypothetical protein | - |
| BL1343_RS09205 () | 2159978..2161321 | - | 1344 | WP_193107954.1 | hypothetical protein | - |
| BL1343_RS09210 () | 2161321..2163260 | - | 1940 | Protein_1775 | TraM recognition domain-containing protein | - |
| BL1343_RS09215 () | 2163331..2164797 | - | 1467 | WP_193107986.1 | ATP-binding protein | - |
| BL1343_RS09220 () | 2165096..2165341 | - | 246 | WP_007053507.1 | hypothetical protein | - |
| BL1343_RS09225 () | 2165580..2166128 | + | 549 | WP_193107955.1 | hypothetical protein | - |
| BL1343_RS09230 () | 2166139..2166405 | + | 267 | Protein_1779 | hypothetical protein | - |
| BL1343_RS09235 () | 2166606..2167595 | + | 990 | WP_131262234.1 | hypothetical protein | - |
| BL1343_RS09240 () | 2167699..2167953 | - | 255 | WP_032746243.1 | Txe/YoeB family addiction module toxin | Toxin Detail |
| BL1343_RS09245 () | 2167953..2168219 | - | 267 | WP_007051980.1 | type II toxin-antitoxin system prevent-host-death family antitoxin | Antitoxin Detail |
| BL1343_RS09250 () | 2168388..2168768 | + | 381 | WP_060868194.1 | hypothetical protein | - |
| BL1343_RS09255 () | 2168791..2169156 | + | 366 | WP_050492047.1 | hypothetical protein | - |
| BL1343_RS09260 () | 2169533..2170387 | - | 855 | WP_193107992.1 | hypothetical protein | - |
| BL1343_RS09265 () | 2170655..2170972 | - | 318 | WP_101026266.1 | HigA family addiction module antidote protein | - |
| BL1343_RS09270 () | 2171122..2174070 | - | 2949 | WP_193107956.1 | secretion protein | - |
| BL1343_RS09275 () | 2174177..2175154 | - | 978 | WP_007051988.1 | hypothetical protein | VF |
| BL1343_RS09280 () | 2175151..2182116 | - | 6966 | WP_193107957.1 | InlB B-repeat-containing protein | - |
| BL1343_RS09285 () | 2182271..2183887 | - | 1617 | WP_193107987.1 | hypothetical protein | VF |
| BL1343_RS09290 () | 2184279..2188232 | - | 3954 | WP_193107988.1 | LPXTG cell wall anchor domain-containing protein | - |
| BL1343_RS09295 () | 2188530..2189312 | - | 783 | WP_193107989.1 | hypothetical protein | - |
| BL1343_RS09300 () | 2189656..2190651 | - | 996 | WP_193107990.1 | hypothetical protein | - |
| BL1343_RS09305 () | 2191970..2193370 | - | 1401 | WP_193107958.1 | hypothetical protein | - |
| BL1343_RS09310 () | 2193386..2194270 | - | 885 | WP_007053490.1 | DNA adenine methylase | - |
| BL1343_RS09315 () | 2194612..2194923 | + | 312 | WP_032746773.1 | hypothetical protein | - |
| BL1343_RS09320 () | 2194937..2195497 | - | 561 | WP_117756819.1 | hypothetical protein | - |
| BL1343_RS09325 () | 2195867..2196184 | - | 318 | WP_193107959.1 | hypothetical protein | - |
| BL1343_RS09330 () | 2196171..2196335 | - | 165 | WP_007056998.1 | hypothetical protein | - |
| BL1343_RS09335 () | 2196482..2197279 | - | 798 | WP_193107960.1 | hypothetical protein | - |
| BL1343_RS09340 () | 2197282..2198751 | - | 1470 | WP_032735122.1 | PrgI family protein | - |
| BL1343_RS09345 () | 2198836..2200281 | - | 1446 | WP_193107961.1 | type IV secretion system protein | - |
| BL1343_RS09350 () | 2200376..2200714 | - | 339 | WP_065436670.1 | hypothetical protein | - |
| BL1343_RS09355 () | 2200784..2201446 | - | 663 | WP_193107962.1 | hypothetical protein | - |
| BL1343_RS09360 () | 2201596..2202523 | - | 928 | Protein_1805 | IS3 family transposase ISBad2 | Transposase |
| BL1343_RS09365 () | 2202471..2202962 | - | 492 | Protein_1806 | IS3 family transposase ISBlo3 | Transposase |
| BL1343_RS09370 () | 2203173..2204414 | - | 1242 | WP_193107991.1 | CHAP domain-containing protein | - |
| BL1343_RS09375 () | 2204891..2205262 | - | 372 | WP_021975145.1 | hypothetical protein | - |
| BL1343_RS09380 () | 2205347..2205565 | - | 219 | WP_193107963.1 | hypothetical protein | - |
| BL1343_RS09385 () | 2205848..2206144 | + | 297 | WP_007053478.1 | hypothetical protein | - |
| BL1343_RS09390 () | 2206336..2206458 | - | 123 | Protein_1811 | DUF1778 domain-containing protein | - |
| BL1343_RS09395 () | 2206622..2207704 | + | 1083 | WP_069483832.1 | hypothetical protein | - |
| BL1343_RS09400 () | 2207729..2208835 | - | 1107 | WP_100969830.1 | Putative prophage phiRv2 integrase ; Integrase | Integrase |
| BL1343_RS09405 () | 2209495..2210280 | + | 786 | WP_060868264.1 | response regulator | - |
| BL1343_RS09410 () | 2210326..2213193 | + | 2868 | WP_131222769.1 | DNA polymerase I | - |
| BL1343_RS09415 () | 2213363..2214283 | + | 921 | WP_165542758.1 | Nif3-like dinuclear metal center hexameric protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|