MGE detailed information
MGE type: Conjugative plasmid MGE length: 109656 bp
Accession: NZ_CP062836 Location: 1..109656 Organism: Escherichia coli strain Res13-Lact-PER04-33 Replicon: plasmid unnamed476
Accession: NZ_CP062836 Location: 1..109656 Organism: Escherichia coli strain Res13-Lact-PER04-33 Replicon: plasmid unnamed476
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IMQ22_RS23395 () | 46..1077 | + | 1032 | WP_000907870.1 | replication initiation protein | - |
| IMQ22_RS23400 () | 1773..1985 | + | 213 | WP_021265676.1 | hypothetical protein | - |
| IMQ22_RS23405 () | 2100..3308 | - | 1209 | WP_000198533.1 | IS91 family transposase | - |
| IMQ22_RS23410 () | 3289..3561 | - | 273 | WP_000019163.1 | hypothetical protein | - |
| IMQ22_RS23415 () | 3638..6052 | - | 2415 | Protein_4 | Tn3-like element TnAs1 family transposase | - |
| IMQ22_RS23420 () | 6056..6616 | - | 561 | WP_001161490.1 | recombinase family protein | - |
| IMQ22_RS23425 () | 6792..7142 | - | 351 | WP_000454193.1 | DUF3330 domain-containing protein | - |
| IMQ22_RS23430 () | 7345..8358 | - | 1014 | WP_000845048.1 | class 1 integron integrase IntI1 | - |
| IMQ22_RS23435 () | 8516..8989 | + | 474 | WP_001389366.1 | trimethoprim-resistant dihydrofolate reductase DfrA17 | - |
| IMQ22_RS23440 () | 9120..9908 | + | 789 | WP_000503573.1 | ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA5 | - |
| IMQ22_RS23445 () | 10110..10814 | + | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| IMQ22_RS23450 () | 10867..11622 | + | 756 | Protein_11 | IS110-like element IS5075 family transposase | - |
| IMQ22_RS23455 () | 11804..11980 | - | 177 | WP_000954592.1 | Arm DNA-binding domain-containing protein | - |
| IMQ22_RS23460 () | 12310..13125 | + | 816 | WP_001043260.1 | sulfonamide-resistant dihydropteroate synthase Sul2 | - |
| IMQ22_RS23465 () | 13212..13454 | + | 243 | Protein_14 | phosphoglucosamine mutase | - |
| IMQ22_RS23470 () | 13408..13659 | - | 252 | WP_001445143.1 | hypothetical protein | - |
| IMQ22_RS23475 () | 13690..14826 | - | 1137 | WP_023140202.1 | IS91 family transposase | - |
| IMQ22_RS23480 () | 15193..15462 | + | 270 | WP_000079941.1 | hypothetical protein | Antitoxin Detail |
| IMQ22_RS23485 () | 15459..15740 | + | 282 | WP_000970007.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| IMQ22_RS23490 () | 15780..16628 | + | 849 | WP_021265674.1 | 3'-5' exonuclease | - |
| IMQ22_RS23495 () | 16745..17218 | + | 474 | WP_001334658.1 | hypothetical protein | - |
| IMQ22_RS23500 () | 17695..17961 | - | 267 | WP_000955263.1 | hypothetical protein | - |
| IMQ22_RS23505 () | 17961..18455 | - | 495 | WP_001459505.1 | hypothetical protein | - |
| IMQ22_RS23510 () | 18511..19113 | - | 603 | WP_000517695.1 | hypothetical protein | - |
| IMQ22_RS23515 () | 19467..20813 | + | 1347 | WP_001132032.1 | hypothetical protein | - |
| IMQ22_RS23520 () | 20920..21597 | + | 678 | WP_001682408.1 | IS66-like element accessory protein TnpA | - |
| IMQ22_RS23525 () | 21597..21944 | + | 348 | WP_000624622.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| IMQ22_RS23530 () | 21964..23535 | + | 1572 | WP_000381395.1 | IS66 family transposase | - |
| IMQ22_RS23535 () | 23799..25679 | + | 1881 | WP_001283341.1 | colicin 1B | - |
| IMQ22_RS23540 () | 25697..26044 | - | 348 | WP_000762570.1 | colicin 1B immunity protein | - |
| IMQ22_RS23545 () | 26163..26511 | + | 349 | Protein_30 | hypothetical protein | - |
| IMQ22_RS23550 () | 26531..27121 | - | 591 | WP_000194553.1 | hypothetical protein | - |
| IMQ22_RS23555 () | 27121..27378 | - | 258 | WP_000371888.1 | hypothetical protein | - |
| IMQ22_RS23560 () | 27729..28730 | + | 1002 | WP_000774874.1 | DUF4238 domain-containing protein | - |
| IMQ22_RS23565 () | 28906..29250 | - | 345 | WP_025653526.1 | hypothetical protein | - |
| IMQ22_RS23570 () | 29749..30003 | - | 255 | WP_000678527.1 | hypothetical protein | - |
| IMQ22_RS23575 () | 30048..30974 | - | 927 | WP_001290416.1 | hypothetical protein | - |
| IMQ22_RS23580 () | 31506..31919 | + | 414 | WP_000465043.1 | hypothetical protein | - |
| IMQ22_RS23585 () | 31921..32700 | + | 780 | WP_021537353.1 | site-specific integrase | - |
| IMQ22_RS23590 () | 32880..33524 | + | 645 | WP_001144036.1 | ParA family protein | - |
| IMQ22_RS23595 () | 33611..33919 | + | 309 | WP_000030199.1 | hypothetical protein | - |
| IMQ22_RS23600 () | 34333..35196 | + | 864 | WP_195706477.1 | plasmid segregation protein ParM | - |
| IMQ22_RS23605 () | 35200..36771 | - | 1572 | WP_000381395.1 | IS66 family transposase | - |
| IMQ22_RS23610 () | 36791..37138 | - | 348 | WP_000624622.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| IMQ22_RS23615 () | 37138..37815 | - | 678 | WP_001682408.1 | IS66-like element accessory protein TnpA | - |
| IMQ22_RS23620 () | 37868..38020 | + | 153 | Protein_45 | recombinase | - |
| IMQ22_RS23625 () | 38013..38429 | + | 417 | WP_001278818.1 | plasmid partitioning/stability family protein | - |
| IMQ22_RS23630 () | 38431..39705 | - | 1275 | WP_000457492.1 | Y-family DNA polymerase | - |
| IMQ22_RS23635 () | 39705..40142 | - | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| IMQ22_RS23640 () | 40139..40387 | - | 249 | WP_000618110.1 | DinI-like family protein | - |
| IMQ22_RS23645 () | 40805..41707 | + | 903 | WP_000273918.1 | DUF1281 domain-containing protein | - |
| IMQ22_RS23650 () | 41704..42015 | + | 312 | WP_010891263.1 | hypothetical protein | - |
| IMQ22_RS23655 () | 42092..42775 | + | 684 | WP_000086178.1 | DNA methylase | - |
| IMQ22_RS23660 () | 42776..42997 | + | 222 | WP_001104887.1 | hypothetical protein | - |
| IMQ22_RS23665 () | 43009..43443 | + | 435 | WP_000274403.1 | DUF1380 family protein | - |
| IMQ22_RS23670 () | 43494..44264 | + | 771 | WP_001044393.1 | hypothetical protein | - |
| IMQ22_RS23675 () | 44805..45107 | + | 303 | WP_072132163.1 | antirestriction protein | - |
| IMQ22_RS23680 () | 45154..45576 | + | 423 | WP_000271729.1 | DUF1380 family protein | - |
| IMQ22_RS23685 () | 45573..45764 | + | 192 | WP_001027500.1 | hypothetical protein | - |
| IMQ22_RS23690 () | 46097..46165 | - | 69 | Protein_59 | pilus protein | - |
| IMQ22_RS23695 () | 47186..49087 | + | 1902 | WP_000936285.1 | group II intron reverse transcriptase/maturase | - |
| IMQ22_RS23700 () | 49237..49722 | + | 486 | WP_031942454.1 | single-stranded DNA-binding protein | - |
| IMQ22_RS23705 () | 49780..50013 | + | 234 | WP_000006014.1 | DUF905 domain-containing protein | - |
| IMQ22_RS23710 () | 50072..52030 | + | 1959 | WP_021265661.1 | ParB/RepB/Spo0J family partition protein | - |
| IMQ22_RS23715 () | 52085..52519 | + | 435 | WP_000845897.1 | conjugation system SOS inhibitor PsiB | - |
| IMQ22_RS23720 () | 52516..53235 | + | 720 | WP_001276261.1 | plasmid SOS inhibition protein A | - |
| IMQ22_RS23725 () | 53232..53828 | + | 597 | WP_000978012.1 | hypothetical protein | - |
| IMQ22_RS23730 () | 54291..54791 | + | 501 | WP_000117609.1 | antirestriction protein ArdA | - |
| IMQ22_RS23735 () | 55520..55954 | + | 435 | WP_000218863.1 | hypothetical protein | - |
| IMQ22_RS23740 () | 56046..56312 | + | 267 | WP_001247862.1 | hypothetical protein | - |
| IMQ22_RS23745 () | 56377..57318 | + | 942 | WP_000038339.1 | Rpn family recombination-promoting nuclease/putative transposase | - |
| IMQ22_RS23750 () | 57380..57550 | + | 171 | WP_000150325.1 | hypothetical protein | - |
| IMQ22_RS23755 () | 57581..57832 | - | 252 | WP_000148285.1 | helix-turn-helix domain-containing protein | - |
| IMQ22_RS23760 () | 57866..58063 | - | 198 | WP_001412266.1 | hypothetical protein | - |
| IMQ22_RS23765 () | 58412..59260 | + | 849 | WP_025653527.1 | DUF4942 domain-containing protein | - |
| IMQ22_RS23770 () | 59345..59680 | - | 336 | WP_000157098.1 | hypothetical protein | - |
| IMQ22_RS23775 () | 59914..60246 | + | 333 | WP_001283947.1 | IncI1-type relaxosome accessory protein NikA | - |
| IMQ22_RS23780 () | 60257..62956 | + | 2700 | WP_024143648.1 | IncI1-type relaxase NikB | - |
| IMQ22_RS23785 () | 62993..65284 | - | 2292 | WP_001289276.1 | hypothetical protein | - |
| IMQ22_RS23790 () | 65277..66347 | - | 1071 | WP_000151583.1 | IncI1-type conjugal transfer protein TrbB | - |
| IMQ22_RS23795 () | 66366..67574 | - | 1209 | WP_000121273.1 | IncI1-type conjugal transfer protein TrbA | - |
| - () | 67754..67811 | - | 58 | NuclAT_0 | - | - |
| - () | 67754..67811 | - | 58 | NuclAT_0 | - | - |
| - () | 67754..67811 | - | 58 | NuclAT_0 | - | - |
| - () | 67754..67811 | - | 58 | NuclAT_0 | - | - |
| IMQ22_RS23800 () | 67866..68018 | + | 153 | WP_001331364.1 | Hok/Gef family protein | Toxin Detail |
| IMQ22_RS23805 () | 68090..68341 | - | 252 | WP_001291964.1 | hypothetical protein | - |
| IMQ22_RS23810 () | 69000..69176 | - | 177 | WP_001054904.1 | hypothetical protein | - |
| IMQ22_RS23815 () | 69568..69777 | + | 210 | WP_000062603.1 | HEAT repeat domain-containing protein | - |
| IMQ22_RS23820 () | 69849..70499 | - | 651 | WP_001178506.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| IMQ22_RS23825 () | 70573..72741 | - | 2169 | WP_021537350.1 | DotA/TraY family protein | - |
| IMQ22_RS23830 () | 72838..73422 | - | 585 | WP_001037987.1 | IncI1-type conjugal transfer protein TraX | - |
| IMQ22_RS23835 () | 73451..74653 | - | 1203 | WP_001189160.1 | IncI1-type conjugal transfer protein TraW | - |
| IMQ22_RS23840 () | 74620..75234 | - | 615 | WP_000337398.1 | IncI1-type conjugal transfer protein TraV | - |
| IMQ22_RS23845 () | 75234..76055 | - | 822 | Protein_90 | IncI1-type conjugal transfer protein TraU | - |
| IMQ22_RS23850 () | 75997..76566 | - | 570 | WP_195686647.1 | hypothetical protein | - |
| IMQ22_RS23855 () | 76550..76738 | - | 189 | WP_001277255.1 | putative conjugal transfer protein TraS | - |
| IMQ22_RS23860 () | 76802..77206 | - | 405 | WP_000086958.1 | IncI1-type conjugal transfer protein TraR | - |
| IMQ22_RS23865 () | 77257..77784 | - | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| IMQ22_RS23870 () | 77784..78488 | - | 705 | WP_000801920.1 | IncI1-type conjugal transfer protein TraP | - |
| IMQ22_RS23875 () | 78488..79777 | - | 1290 | WP_001272003.1 | conjugal transfer protein TraO | - |
| IMQ22_RS23880 () | 79780..80763 | - | 984 | WP_001191877.1 | IncI1-type conjugal transfer protein TraN | - |
| IMQ22_RS23885 () | 80847..81137 | - | 291 | WP_001299214.1 | hypothetical protein | - |
| IMQ22_RS23890 () | 81134..82282 | - | 1149 | WP_001024972.1 | plasmid transfer ATPase TraJ | - |
| IMQ22_RS23895 () | 82279..83097 | - | 819 | WP_000646098.1 | IncI1-type conjugal transfer lipoprotein TraI | - |
| IMQ22_RS23900 () | 83094..83552 | - | 459 | WP_001079808.1 | IncI1-type conjugal transfer lipoprotein TraH | - |
| IMQ22_RS23905 () | 83947..84531 | - | 585 | WP_000977522.1 | histidine phosphatase family protein | - |
| IMQ22_RS23910 () | 84591..85793 | - | 1203 | WP_000976351.1 | conjugal transfer protein TraF | - |
| IMQ22_RS23915 () | 85878..86702 | - | 825 | WP_001238939.1 | hypothetical protein | - |
| IMQ22_RS23920 () | 86853..88007 | - | 1155 | WP_001139957.1 | integrase | - |
| IMQ22_RS23925 () | 88135..88290 | + | 156 | WP_001302705.1 | hypothetical protein | - |
| IMQ22_RS23930 () | 89047..89379 | + | 333 | WP_064754192.1 | WbuC family cupin fold metalloprotein | - |
| IMQ22_RS23935 () | 89426..90301 | - | 876 | WP_013188473.1 | class A extended-spectrum beta-lactamase CTX-M-1 | - |
| IMQ22_RS23940 () | 90680..91642 | - | 963 | WP_195686648.1 | IS5 family transposase | - |
| IMQ22_RS23945 () | 91847..92544 | + | 698 | Protein_110 | IS1 family transposase | - |
| IMQ22_RS23950 () | 92561..92776 | - | 216 | Protein_111 | IS1380 family transposase | - |
| IMQ22_RS23955 () | 93132..93380 | + | 249 | WP_001349157.1 | hypothetical protein | - |
| IMQ22_RS23960 () | 93377..94669 | - | 1293 | WP_001417545.1 | shufflon system plasmid conjugative transfer pilus tip adhesin PilV | - |
| IMQ22_RS23965 () | 94669..95325 | - | 657 | WP_001193553.1 | prepilin peptidase | - |
| IMQ22_RS23970 () | 95310..95870 | - | 561 | WP_000014116.1 | lytic transglycosylase domain-containing protein | - |
| IMQ22_RS23975 () | 95880..96494 | - | 615 | WP_000959785.1 | pilus assembly protein PilX | - |
| IMQ22_RS23980 () | 96512..97609 | - | 1098 | WP_001208805.1 | type II secretion system F family protein | - |
| IMQ22_RS23985 () | 97622..99175 | - | 1554 | WP_000362202.1 | Flp pilus assembly complex ATPase component TadA | - |
| IMQ22_RS23990 () | 99186..99638 | - | 453 | WP_001247334.1 | type IV pilus biogenesis protein PilP | - |
| IMQ22_RS23995 () | 99625..100920 | - | 1296 | WP_000752772.1 | type 4b pilus protein PilO2 | - |
| IMQ22_RS24000 () | 100913..102595 | - | 1683 | WP_000748143.1 | PilN family type IVB pilus formation outer membrane protein | - |
| IMQ22_RS24005 () | 102609..103046 | - | 438 | WP_000539807.1 | type IV pilus biogenesis protein PilM | - |
| IMQ22_RS24010 () | 103046..104113 | - | 1068 | WP_001302629.1 | type IV pilus biogenesis lipoprotein PilL | - |
| IMQ22_RS24015 () | 104737..105033 | - | 297 | WP_000494779.1 | hypothetical protein | - |
| IMQ22_RS24020 () | 105209..105463 | - | 255 | WP_001136187.1 | PilI type IV pilus biogenesis protein | - |
| IMQ22_RS24025 () | 105625..106176 | - | 552 | WP_000744644.1 | hypothetical protein | - |
| IMQ22_RS24030 () | 106349..107032 | - | 684 | WP_000213859.1 | conjugal transfer protein TraC | - |
| IMQ22_RS24035 () | 107286..107819 | - | 534 | WP_001372168.1 | transcription termination factor NusG | - |
| IMQ22_RS24040 () | 108261..108548 | - | 288 | WP_000074849.1 | conjugal transfer protein TraA | - |
| IMQ22_RS24045 () | 108466..108729 | - | 264 | WP_001324596.1 | ash family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|