MGE detailed information
MGE type: Prophage MGE length: 42003 bp
Accession: NZ_CP062815 Location: 2282498..2324500 Organism: Escherichia coli strain Res13-Sevr-PER06-05-b-A Replicon: chromosome
Accession: NZ_CP062815 Location: 2282498..2324500 Organism: Escherichia coli strain Res13-Sevr-PER06-05-b-A Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IMQ58_RS11000 () | 2278397..2279617 | + | 1221 | WP_000225262.1 | DNA-binding transcriptional repressor Mlc | - |
| IMQ58_RS11005 () | 2279742..2280437 | + | 696 | WP_000919231.1 | dethiobiotin synthase | - |
| IMQ58_RS11010 () | 2280390..2281682 | - | 1293 | WP_001315626.1 | voltage-gated ClC-type chloride channel ClcB | - |
| IMQ58_RS11015 () | 2281841..2282455 | - | 615 | WP_000148710.1 | Tat proofreading chaperone DmsD | - |
| IMQ58_RS11020 () | 2282498..2283352 | - | 855 | WP_000526503.1 | dimethyl sulfoxide reductase anchor subunit | - |
| IMQ58_RS11025 () | 2283354..2283971 | - | 618 | WP_000213028.1 | dimethylsulfoxide reductase subunit B | - |
| IMQ58_RS11030 () | 2283982..2286405 | - | 2424 | WP_097491532.1 | dimethyl sulfoxide reductase subunit A | - |
| IMQ58_RS11035 () | 2286466..2288892 | - | 2427 | WP_001619485.1 | dimethyl sulfoxide reductase subunit A | - |
| IMQ58_RS11040 () | 2289091..2289396 | - | 306 | WP_001295396.1 | DUF1161 domain-containing protein | - |
| IMQ58_RS11045 () | 2289504..2290214 | + | 711 | WP_072104773.1 | YnfC family lipoprotein | - |
| IMQ58_RS11050 () | 2290217..2290777 | - | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| IMQ58_RS11055 () | 2290812..2291153 | - | 342 | WP_000705197.1 | DUF1283 family protein | - |
| IMQ58_RS11060 () | 2291288..2291614 | + | 327 | WP_000598292.1 | YnfA family protein | - |
| IMQ58_RS11065 () | 2291820..2293034 | + | 1215 | WP_001619484.1 | starvation-sensing protein RspA | - |
| IMQ58_RS11070 () | 2293046..2294065 | + | 1020 | WP_000836066.1 | Zn-dependent oxidoreductase | - |
| IMQ58_RS11075 () | 2294123..2294251 | + | 129 | WP_001389342.1 | hypothetical protein | - |
| IMQ58_RS11080 () | 2294253..2295533 | - | 1281 | WP_130082460.1 | Putative defective protein IntQ ; Integrase | Integrase |
| IMQ58_RS11085 () | 2295568..2295819 | - | 252 | WP_000005552.1 | excisionase family protein | - |
| IMQ58_RS11090 () | 2295892..2298363 | - | 2472 | WP_021511903.1 | exonuclease | - |
| IMQ58_RS11095 () | 2298457..2298648 | - | 192 | WP_001083280.1 | lysis protein YdfD | - |
| IMQ58_RS11100 () | 2298645..2298767 | - | 123 | Protein_2169 | cell division inhibition protein DicB | - |
| IMQ58_RS11105 () | 2298832..2299994 | + | 1163 | WP_085947771.1 | IS3 family transposase IS3 | Transposase |
| IMQ58_RS11110 () | 2300020..2300094 | - | 75 | Protein_2171 | cell division inhibition protein DicB | - |
| IMQ58_RS11115 () | 2300494..2300658 | + | 165 | WP_001331716.1 | hypothetical protein | - |
| IMQ58_RS11120 () | 2300673..2300921 | + | 249 | Protein_2173 | hypothetical protein | - |
| IMQ58_RS11125 () | 2300962..2301384 | + | 423 | WP_032201175.1 | DUF977 family protein | - |
| IMQ58_RS11130 () | 2301381..2301737 | + | 357 | WP_001374839.1 | class I SAM-dependent methyltransferase | - |
| IMQ58_RS11135 () | 2302348..2302635 | + | 288 | Protein_2176 | hypothetical protein | - |
| IMQ58_RS11140 () | 2303404..2304745 | + | 1342 | Protein_2177 | ISNCY family transposase ISCARN112 | Transposase |
| IMQ58_RS11145 () | 2305182..2305514 | - | 333 | WP_001317460.1 | FlxA-like family protein | - |
| IMQ58_RS11150 () | 2305717..2306022 | - | 306 | WP_001326990.1 | hypothetical protein | - |
| IMQ58_RS11155 () | 2306047..2306286 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| IMQ58_RS11160 () | 2306286..2306573 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| IMQ58_RS11165 () | 2306645..2306800 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| IMQ58_RS11170 () | 2307017..2307268 | + | 252 | WP_000980994.1 | hypothetical protein | - |
| IMQ58_RS11175 () | 2307335..2307613 | + | 279 | WP_012304870.1 | hypothetical protein | - |
| IMQ58_RS11180 () | 2307615..2308664 | + | 1050 | WP_001265198.1 | DUF968 domain-containing protein | - |
| IMQ58_RS11185 () | 2308678..2309430 | + | 753 | WP_001047135.1 | antitermination protein | - |
| IMQ58_RS11190 () | 2309708..2309797 | - | 90 | WP_120795389.1 | hypothetical protein | - |
| IMQ58_RS11195 () | 2309852..2310064 | - | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| IMQ58_RS11200 () | 2310334..2311350 | + | 1017 | WP_001322394.1 | IS5 family transposase IS5D | Transposase |
| IMQ58_RS11205 () | 2311564..2311779 | + | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| IMQ58_RS11210 () | 2312533..2312748 | + | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| IMQ58_RS11215 () | 2312753..2313064 | + | 312 | WP_000189915.1 | YdfR family protein | - |
| IMQ58_RS11220 () | 2313061..2313594 | + | 534 | WP_001092971.1 | lysozyme | - |
| IMQ58_RS11225 () | 2313591..2314088 | + | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| IMQ58_RS11230 () | 2314452..2314664 | + | 213 | WP_000066495.1 | cold shock protein CspI | - |
| IMQ58_RS11235 () | 2314675..2314863 | + | 189 | WP_071524604.1 | cold-shock protein | - |
| IMQ58_RS11240 () | 2314866..2314931 | + | 66 | WP_122134696.1 | hypothetical protein | - |
| IMQ58_RS11245 () | 2315011..2315166 | + | 156 | WP_001309517.1 | hypothetical protein | - |
| IMQ58_RS11250 () | 2315338..2315511 | + | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| IMQ58_RS11255 () | 2315663..2316073 | - | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| IMQ58_RS11260 () | 2316131..2316364 | - | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| IMQ58_RS11265 () | 2316753..2316917 | + | 165 | WP_165369921.1 | hypothetical protein | - |
| IMQ58_RS11270 () | 2316914..2317120 | + | 207 | WP_000198149.1 | gpW family protein | - |
| IMQ58_RS11275 () | 2317117..2317746 | + | 630 | Protein_2204 | phage portal protein | - |
| IMQ58_RS11280 () | 2317746..2318909 | + | 1164 | Protein_2205 | DUF1983 domain-containing protein | - |
| IMQ58_RS11285 () | 2318977..2319144 | + | 168 | Protein_2206 | Ail/Lom family outer membrane beta-barrel protein | - |
| IMQ58_RS11290 () | 2319146..2320618 | + | 1473 | Protein_2207 | tail fiber protein | - |
| IMQ58_RS11295 () | 2320618..2321193 | + | 576 | WP_000885616.1 | tail fiber assembly protein | - |
| IMQ58_RS11300 () | 2321291..2321881 | - | 591 | WP_000086514.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| IMQ58_RS11305 () | 2322198..2322431 | - | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| IMQ58_RS11310 () | 2322500..2322613 | - | 114 | WP_120795384.1 | hypothetical protein | - |
| IMQ58_RS11315 () | 2323217..2324500 | + | 1284 | Protein_2212 | MHS family MFS transporter YdfJ | - |
| IMQ58_RS11320 () | 2324589..2326049 | + | 1461 | WP_000527809.1 | mannitol dehydrogenase family protein | - |
| IMQ58_RS11325 () | 2326084..2326287 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| IMQ58_RS11330 () | 2326464..2327150 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator YdfH | - |
| IMQ58_RS11335 () | 2327239..2327985 | - | 747 | WP_000636571.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|