MGE detailed information
MGE type: Prophage MGE length: 55119 bp
Accession: NZ_CP062204 Location: 4718740..4773858 Organism: Escherichia coli strain C311 Replicon: chromosome
Accession: NZ_CP062204 Location: 4718740..4773858 Organism: Escherichia coli strain C311 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IG172_RS22965 () | 4713795..4714211 | - | 417 | WP_000270375.1 | secondary thiamine-phosphate synthase enzyme YjbQ | - |
| IG172_RS22970 () | 4714322..4715035 | - | 714 | WP_001307512.1 | acid phosphatase AphA | - |
| IG172_RS22975 () | 4715437..4715940 | + | 504 | WP_001027717.1 | hypothetical protein | - |
| IG172_RS22980 () | 4716162..4717355 | - | 1194 | WP_000486994.1 | aromatic amino acid transaminase | - |
| IG172_RS22985 () | 4717608..4718687 | - | 1080 | WP_192291950.1 | alanine racemase | - |
| IG172_RS22990 () | 4718740..4720155 | - | 1416 | WP_000918363.1 | replicative DNA helicase | - |
| IG172_RS22995 () | 4720238..4721221 | + | 984 | WP_000235518.1 | Quinone oxidoreductase 1 | VF |
| IG172_RS23000 () | 4721387..4721629 | - | 243 | WP_000891389.1 | envelope stress response protein PspG | - |
| IG172_RS23005 () | 4721763..4722800 | - | 1038 | WP_000543828.1 | tRNA dihydrouridine(20/20a) synthase DusA | - |
| IG172_RS23010 () | 4722889..4723986 | + | 1098 | WP_000332271.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| IG172_RS23015 () | 4724048..4724296 | + | 249 | WP_001217539.1 | DinI-like family protein | - |
| IG172_RS23020 () | 4724412..4724996 | - | 585 | WP_097452166.1 | tail fiber assembly protein | - |
| IG172_RS23025 () | 4724996..4727320 | - | 2325 | WP_192291953.1 | prophage tail fiber N-terminal domain-containing protein | - |
| IG172_RS23030 () | 4727385..4727984 | - | 600 | WP_001230356.1 | Outer membrane protein X | VF |
| IG172_RS23035 () | 4728051..4731449 | - | 3399 | WP_192291956.1 | host specificity protein J | - |
| IG172_RS23040 () | 4731516..4731854 | - | 339 | WP_153274582.1 | hypothetical protein | - |
| IG172_RS23045 () | 4731927..4732568 | - | 642 | WP_028127181.1 | tail assembly protein | - |
| IG172_RS23050 () | 4732466..4733209 | - | 744 | WP_192291959.1 | C40 family peptidase | - |
| IG172_RS23055 () | 4733215..4733913 | - | 699 | WP_001152612.1 | phage minor tail protein L | - |
| IG172_RS23060 () | 4733913..4734242 | - | 330 | WP_000847321.1 | phage tail protein | - |
| IG172_RS23065 () | 4734239..4736800 | - | 2562 | WP_192291962.1 | phage tail tape measure protein | - |
| IG172_RS23070 () | 4736793..4737227 | - | 435 | WP_000459457.1 | phage tail assembly protein T | - |
| IG172_RS23075 () | 4737209..4737631 | - | 423 | WP_000479153.1 | phage minor tail protein G | - |
| IG172_RS23080 () | 4737647..4738387 | - | 741 | WP_001437681.1 | phage tail protein | - |
| IG172_RS23085 () | 4738395..4738790 | - | 396 | WP_000683105.1 | phage minor tail U family protein | - |
| IG172_RS23090 () | 4738787..4739365 | - | 579 | WP_163513335.1 | phage tail protein | - |
| IG172_RS23095 () | 4739377..4739730 | - | 354 | WP_001204540.1 | tail attachment protein | - |
| IG172_RS23100 () | 4739723..4740097 | - | 375 | WP_000201530.1 | hypothetical protein | - |
| IG172_RS23105 () | 4740149..4741177 | - | 1029 | WP_000522651.1 | major capsid protein | - |
| IG172_RS23110 () | 4741235..4741582 | - | 348 | WP_000256840.1 | head decoration protein | - |
| IG172_RS23115 () | 4741619..4743124 | - | 1506 | WP_001253996.1 | S49 family peptidase | - |
| IG172_RS23120 () | 4743114..4744706 | - | 1593 | WP_032215166.1 | phage portal protein | - |
| IG172_RS23125 () | 4744703..4744909 | - | 207 | WP_000259002.1 | head-tail joining protein | - |
| IG172_RS23130 () | 4744893..4746821 | - | 1929 | WP_032215165.1 | phage terminase large subunit family protein | - |
| IG172_RS23135 () | 4746793..4747341 | - | 549 | WP_001102147.1 | terminase small subunit | - |
| IG172_RS23140 () | 4747729..4747968 | + | 240 | WP_064757403.1 | YlcI/YnfO family protein | - |
| IG172_RS23145 () | 4748180..4748362 | - | 183 | WP_077756527.1 | Rz1 family lipoprotein | - |
| IG172_RS23150 () | 4748579..4749112 | - | 534 | WP_094029530.1 | lysozyme | - |
| IG172_RS23155 () | 4749176..4749526 | - | 351 | WP_094029531.1 | YdfR family protein | - |
| IG172_RS23160 () | 4749531..4749746 | - | 216 | WP_001596848.1 | class II holin family protein | - |
| IG172_RS23165 () | 4749814..4750866 | - | 1053 | WP_000799656.1 | site-specific DNA-methyltransferase | - |
| IG172_RS23170 () | 4751016..4751210 | - | 195 | WP_094029532.1 | TrmB family transcriptional regulator | - |
| IG172_RS23175 () | 4751391..4751921 | - | 531 | WP_094029533.1 | hypothetical protein | - |
| IG172_RS23180 () | 4752076..4752828 | - | 753 | WP_094029534.1 | antitermination protein | - |
| IG172_RS23185 () | 4752842..4753831 | - | 990 | WP_001360050.1 | DUF968 domain-containing protein | - |
| IG172_RS23190 () | 4753839..4754648 | - | 810 | WP_032330025.1 | KilA-N domain-containing protein | - |
| IG172_RS23195 () | 4754668..4755057 | - | 390 | WP_042630964.1 | RusA family crossover junction endodeoxyribonuclease | - |
| IG172_RS23200 () | 4755054..4755380 | - | 327 | WP_001459458.1 | lexA DNA-binding domain protein | - |
| IG172_RS23205 () | 4755377..4755544 | - | 168 | WP_001379658.1 | hypothetical protein | - |
| IG172_RS23210 () | 4755552..4756034 | - | 483 | WP_192291965.1 | phage N-6-adenine-methyltransferase | - |
| IG172_RS23215 () | 4756034..4756528 | - | 495 | WP_192291968.1 | PerC family transcriptional regulator | - |
| IG172_RS23220 () | 4756525..4757343 | - | 819 | WP_023154069.1 | helix-turn-helix domain-containing protein | - |
| IG172_RS23225 () | 4757340..4757564 | - | 225 | WP_000620698.1 | hypothetical protein | - |
| IG172_RS23230 () | 4757561..4758712 | - | 1152 | WP_192291971.1 | Rha family phage regulatory protein | - |
| IG172_RS23235 () | 4758709..4759287 | - | 579 | WP_000514172.1 | hypothetical protein | - |
| IG172_RS23240 () | 4759316..4759579 | - | 264 | WP_000098315.1 | helix-turn-helix domain-containing protein | - |
| IG172_RS23245 () | 4759686..4760390 | + | 705 | WP_001410974.1 | helix-turn-helix domain-containing protein | - |
| IG172_RS23250 () | 4760615..4761700 | + | 1086 | WP_000606712.1 | ParA family protein | - |
| IG172_RS23255 () | 4762613..4762975 | + | 363 | WP_000135680.1 | hypothetical protein | - |
| IG172_RS23260 () | 4763041..4763865 | + | 825 | WP_000081319.1 | YfdQ family protein | - |
| IG172_RS23265 () | 4763994..4764530 | + | 537 | WP_000008178.1 | 5'-deoxynucleotidase | - |
| IG172_RS23270 () | 4764521..4764871 | + | 351 | WP_001242740.1 | hypothetical protein | - |
| IG172_RS23275 () | 4764868..4765353 | + | 486 | WP_000145672.1 | class I SAM-dependent methyltransferase | - |
| IG172_RS23280 () | 4765350..4765949 | + | 600 | WP_074512079.1 | ead/Ea22-like family protein | - |
| IG172_RS23285 () | 4765951..4766142 | + | 192 | WP_001014290.1 | hypothetical protein | - |
| IG172_RS23290 () | 4766145..4766897 | + | 753 | WP_001094867.1 | DUF551 domain-containing protein | - |
| IG172_RS23295 () | 4766897..4767469 | + | 573 | WP_001061339.1 | 3'-5' exoribonuclease | - |
| IG172_RS23300 () | 4767506..4767778 | + | 273 | WP_001093911.1 | pyocin activator PrtN family protein | - |
| IG172_RS23305 () | 4767812..4768360 | - | 549 | WP_192291974.1 | hypothetical protein | Toxin Detail |
| IG172_RS23310 () | 4768383..4768856 | - | 474 | WP_000287252.1 | SocA family protein | Antitoxin Detail |
| IG172_RS23315 () | 4769143..4769265 | - | 123 | WP_001300034.1 | hypothetical protein | - |
| IG172_RS23320 () | 4769629..4770652 | - | 1024 | Protein_4573 | DUF2713 family protein | - |
| IG172_RS23325 () | 4770970..4771485 | + | 516 | WP_001295691.1 | zinc uptake transcriptional repressor Zur | - |
| IG172_RS23330 () | 4771527..4771736 | - | 210 | WP_001030593.1 | CsbD family protein | - |
| IG172_RS23335 () | 4771852..4773177 | - | 1326 | WP_001295692.1 | MATE family efflux transporter DinF | - |
| IG172_RS23340 () | 4773250..4773858 | - | 609 | WP_000646078.1 | transcriptional repressor LexA | - |
| IG172_RS23345 () | 4773968..4774336 | - | 369 | WP_000002907.1 | diacylglycerol kinase | - |
| IG172_RS23350 () | 4774507..4776930 | + | 2424 | WP_000017354.1 | glycerol-3-phosphate 1-O-acyltransferase PlsB | - |
| IG172_RS23355 () | 4777085..4777957 | - | 873 | WP_000455228.1 | 4-hydroxybenzoate octaprenyltransferase | - |
| IG172_RS23360 () | 4777970..4778467 | - | 498 | WP_001297295.1 | chorismate lyase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|