MGE detailed information
MGE type: Conjugative plasmid MGE length: 129153 bp
Accession: NZ_CP061750 Location: 1..129153 Organism: Escherichia coli O15:H12 strain 2273-PO3 Replicon: plasmid unnamed1
Accession: NZ_CP061750 Location: 1..129153 Organism: Escherichia coli O15:H12 strain 2273-PO3 Replicon: plasmid unnamed1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IED00_RS24265 () | 192..266 | + | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| IED00_RS24270 () | 259..1116 | + | 858 | WP_001554370.1 | incFII family plasmid replication initiator RepA | - |
| IED00_RS24275 () | 1819..2052 | + | 234 | WP_071885692.1 | hypothetical protein | - |
| IED00_RS24280 () | 2125..2388 | + | 264 | WP_016241862.1 | hypothetical protein | - |
| IED00_RS24285 () | 2378..2677 | + | 300 | WP_016241863.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| IED00_RS24290 () | 2818..3015 | + | 198 | Protein_5 | DUF4238 domain-containing protein | - |
| IED00_RS24295 () | 3050..5947 | - | 2898 | WP_191111687.1 | Tn3 family transposase TnpA_Tn5403 | Transposase |
| IED00_RS24300 () | 6042..6647 | + | 606 | WP_000509966.1 | Tn3 family transposase TnpR_Tn5403 | Transposase |
| IED00_RS24305 () | 6680..8229 | + | 1550 | Protein_8 | type IV secretory system conjugative DNA transfer family protein | - |
| IED00_RS24310 () | 8226..8639 | + | 414 | WP_031942378.1 | conjugal transfer protein VirB | - |
| IED00_RS24315 () | 8636..8938 | + | 303 | WP_000717624.1 | IncN plasmid KikA protein | - |
| IED00_RS24320 () | 9053..9630 | - | 578 | Protein_11 | hypothetical protein | - |
| IED00_RS24325 () | 9611..10773 | + | 1163 | WP_085947771.1 | IS3 family transposase IS3 | Transposase |
| IED00_RS24330 () | 10806..11237 | - | 432 | Protein_13 | SMEK domain-containing protein | - |
| IED00_RS24335 () | 11373..13526 | + | 2154 | WP_031942376.1 | type IA DNA topoisomerase | - |
| IED00_RS24340 () | 13523..13729 | + | 207 | WP_000850859.1 | hemolysin expression modulator Hha | - |
| IED00_RS24345 () | 13745..14179 | + | 435 | WP_001293129.1 | H-NS histone family protein | - |
| IED00_RS24350 () | 14448..14888 | - | 441 | WP_071997311.1 | EAL domain-containing protein | - |
| IED00_RS24355 () | 14885..15582 | - | 698 | Protein_18 | IS1 family transposase IS1A | Transposase |
| IED00_RS24360 () | 15638..16222 | + | 585 | Protein_19 | Chaperone protein FocC | VF |
| IED00_RS24365 () | 16234..18720 | + | 2487 | WP_000813718.1 | Outer membrane usher protein HtrE | VF |
| IED00_RS24370 () | 18711..19706 | + | 996 | WP_015060507.1 | Fimbria adhesin protein | VF |
| IED00_RS24375 () | 19720..20355 | + | 636 | WP_000677445.1 | hypothetical protein | VF |
| IED00_RS24380 () | 20390..20587 | - | 198 | Protein_23 | phosphodiesterase MrkJ | - |
| IED00_RS24385 () | 20621..21589 | + | 969 | WP_077249520.1 | IS5 family transposase IS903B | Transposase |
| IED00_RS24390 () | 21723..22367 | - | 645 | WP_000203396.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| IED00_RS24395 () | 22653..23273 | + | 621 | WP_000864791.1 | ParA family protein | - |
| IED00_RS24400 () | 23325..23555 | + | 231 | WP_000051064.1 | partitioning protein | - |
| IED00_RS24405 () | 23571..23864 | + | 294 | WP_015060510.1 | hypothetical protein | - |
| IED00_RS24410 () | 23866..24834 | + | 969 | WP_176705453.1 | IS5 family transposase IS903B | Transposase |
| IED00_RS24415 () | 24894..25316 | - | 423 | WP_031942371.1 | DNA distortion polypeptide 3 | - |
| IED00_RS24420 () | 25384..25830 | - | 447 | WP_001074386.1 | hypothetical protein | - |
| IED00_RS24425 () | 25870..26706 | - | 837 | WP_001050931.1 | replication initiation protein | - |
| IED00_RS24430 () | 27940..28191 | + | 252 | WP_000121743.1 | plasmid stabilization protein | Antitoxin Detail |
| IED00_RS24435 () | 28181..28462 | + | 282 | WP_000220560.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| IED00_RS24440 () | 28608..28931 | + | 324 | WP_001181903.1 | hypothetical protein | - |
| IED00_RS24445 () | 28976..29221 | + | 246 | WP_000356546.1 | hypothetical protein | - |
| IED00_RS24450 () | 29211..29426 | + | 216 | WP_001180116.1 | hypothetical protein | - |
| IED00_RS24455 () | 29519..29848 | + | 330 | WP_000866648.1 | hypothetical protein | - |
| IED00_RS24460 () | 29891..30070 | + | 180 | WP_000439078.1 | hypothetical protein | - |
| IED00_RS24465 () | 30140..30289 | + | 150 | WP_000003880.1 | hypothetical protein | - |
| IED00_RS24470 () | 30402..33410 | - | 3009 | WP_001143750.1 | Tn3 family transposase ISEc63 | Transposase |
| IED00_RS24475 () | 33574..34125 | + | 552 | WP_001235704.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| IED00_RS24480 () | 34141..36237 | + | 2097 | WP_000422420.1 | hypothetical protein | - |
| IED00_RS24485 () | 36612..37763 | - | 1152 | WP_003116645.1 | Putative serine protease HhoB | VF |
| IED00_RS24490 () | 37783..38745 | - | 963 | WP_013984524.1 | M48 family metalloprotease | - |
| IED00_RS24495 () | 38732..39220 | - | 489 | WP_016241865.1 | phosphate-starvation-inducible PsiE family protein | - |
| IED00_RS24500 () | 39232..39474 | - | 243 | WP_001446206.1 | diguanylate cyclase | - |
| IED00_RS24505 () | 39581..40261 | - | 681 | Protein_48 | PAS domain-containing protein | - |
| IED00_RS24510 () | 40251..41957 | - | 1707 | WP_191111688.1 | cation:proton antiporter | - |
| IED00_RS24515 () | 41961..42401 | - | 441 | WP_191111689.1 | heat resistance system thioredoxin Trx-GI | - |
| IED00_RS24520 () | 42391..42996 | - | 606 | WP_024146425.1 | hypothetical protein | - |
| IED00_RS24525 () | 42953..43645 | - | 693 | WP_023205312.1 | hypothetical protein | - |
| IED00_RS24530 () | 43826..44737 | - | 912 | WP_000545589.1 | mechanosensitive ion channel family protein | - |
| IED00_RS24535 () | 44920..45495 | - | 576 | Protein_54 | hypothetical protein | - |
| IED00_RS24540 () | 45575..46186 | - | 612 | WP_021567660.1 | heat resistance membrane protein HdeD-GI | - |
| IED00_RS24545 () | 46276..47163 | - | 888 | WP_044723187.1 | heat resistance protein YfdX2 | - |
| IED00_RS24550 () | 47266..48174 | - | 909 | WP_021567662.1 | heat resistance protein YfdX1 | - |
| IED00_RS24555 () | 48196..48654 | - | 459 | WP_023205562.1 | Spore protein SP21 | VF |
| IED00_RS24560 () | 48733..50562 | - | 1830 | WP_021567664.1 | ATP-dependent zinc metalloprotease FtsH 4 | VF |
| IED00_RS24565 () | 50590..52020 | - | 1431 | WP_023205563.1 | cardiolipin synthase | - |
| IED00_RS24570 () | 52037..54886 | - | 2850 | WP_000101609.1 | ATP-dependent Clp protease ATP-binding subunit ClpC | VF |
| IED00_RS24575 () | 54984..55553 | - | 570 | WP_000350432.1 | Spore protein SP21 | VF |
| IED00_RS24580 () | 55829..56122 | - | 294 | Protein_63 | hypothetical protein | - |
| IED00_RS24585 () | 56302..56454 | + | 153 | Protein_64 | transposase domain-containing protein | - |
| IED00_RS24590 () | 56724..56846 | - | 123 | Protein_65 | ATP-binding protein | - |
| IED00_RS24595 () | 56938..58560 | - | 1623 | WP_191111690.1 | transposase | - |
| IED00_RS24600 () | 58553..60055 | - | 1503 | WP_044864177.1 | TnsD family Tn7-like transposition protein | - |
| IED00_RS24605 () | 60057..61536 | - | 1480 | Protein_68 | ATP-binding protein | - |
| IED00_RS24610 () | 61529..63589 | - | 2061 | WP_013984538.1 | DDE-type integrase/transposase/recombinase | - |
| IED00_RS24615 () | 63603..64430 | - | 828 | WP_044864179.1 | heteromeric transposase endonuclease subunit TnsA | - |
| IED00_RS24620 () | 64746..65030 | + | 285 | WP_044864180.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| IED00_RS24625 () | 65030..65305 | + | 276 | WP_000421259.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| IED00_RS24630 () | 65403..65684 | + | 282 | WP_044864186.1 | hypothetical protein | - |
| IED00_RS24635 () | 65866..68997 | + | 3132 | WP_044864181.1 | hypothetical protein | - |
| IED00_RS24640 () | 69521..69934 | + | 414 | WP_000465034.1 | hypothetical protein | - |
| IED00_RS24645 () | 69936..70718 | + | 783 | WP_016237148.1 | site-specific integrase | - |
| IED00_RS24650 () | 70891..71244 | + | 354 | WP_000864812.1 | colicin M immunity protein | - |
| IED00_RS24655 () | 71309..72277 | - | 969 | WP_000654812.1 | IS5 family transposase IS903B | Transposase |
| IED00_RS24660 () | 72360..73175 | - | 816 | WP_000449473.1 | lipid II-degrading bacteriocin colicin M | - |
| IED00_RS24665 () | 73418..73945 | + | 528 | WP_001480711.1 | colicin B immunity protein | - |
| IED00_RS24670 () | 73963..75498 | - | 1536 | WP_001282376.1 | pore-forming bacteriocin colicin B | - |
| IED00_RS24675 () | 75939..76451 | + | 513 | WP_001027529.1 | hypothetical protein | - |
| IED00_RS24680 () | 76602..76952 | - | 351 | WP_000361384.1 | plasmid partitioning/stability family protein | - |
| IED00_RS24685 () | 76955..77917 | - | 963 | WP_000959884.1 | plasmid segregation protein ParM | - |
| IED00_RS24690 () | 78065..78357 | + | 293 | Protein_85 | hypothetical protein | - |
| IED00_RS24695 () | 78434..79117 | + | 684 | WP_000085940.1 | DNA methylase | - |
| IED00_RS24700 () | 79118..79339 | + | 222 | WP_001104873.1 | hypothetical protein | - |
| IED00_RS24705 () | 79353..79787 | + | 435 | WP_000274486.1 | DUF1380 family protein | - |
| IED00_RS24710 () | 79832..80602 | + | 771 | WP_001006200.1 | hypothetical protein | - |
| IED00_RS24715 () | 81138..81440 | + | 303 | WP_001436678.1 | antirestriction protein | - |
| IED00_RS24720 () | 81487..81909 | + | 423 | WP_000271753.1 | DUF1380 family protein | - |
| IED00_RS24725 () | 81906..82097 | + | 192 | WP_001027519.1 | hypothetical protein | - |
| IED00_RS24730 () | 83135..83365 | + | 231 | WP_000218642.1 | hypothetical protein | - |
| IED00_RS24735 () | 83417..84778 | + | 1362 | WP_191111686.1 | DUF3560 domain-containing protein | - |
| IED00_RS24740 () | 84826..85389 | + | 564 | WP_001330829.1 | class I SAM-dependent methyltransferase | - |
| IED00_RS24745 () | 86009..86215 | + | 207 | WP_000547971.1 | hypothetical protein | - |
| IED00_RS24750 () | 86241..86780 | + | 540 | WP_000290812.1 | single-stranded DNA-binding protein | - |
| IED00_RS24755 () | 86842..87075 | + | 234 | WP_000006030.1 | DUF905 family protein | - |
| IED00_RS24760 () | 87140..89098 | + | 1959 | WP_000117210.1 | ParB/RepB/Spo0J family partition protein | - |
| IED00_RS24765 () | 89153..89587 | + | 435 | WP_000845873.1 | conjugation system SOS inhibitor PsiB | - |
| IED00_RS24770 () | 89584..90303 | + | 720 | WP_000116348.1 | plasmid SOS inhibition protein A | - |
| IED00_RS24775 () | 90315..90503 | - | 189 | WP_001299721.1 | hypothetical protein | - |
| - () | 90315..90539 | + | 225 | NuclAT_0 | - | - |
| - () | 90315..90539 | + | 225 | NuclAT_0 | - | - |
| - () | 90315..90539 | + | 225 | NuclAT_0 | - | - |
| - () | 90315..90539 | + | 225 | NuclAT_0 | - | - |
| - () | 90472..90537 | - | 66 | - | - | - |
| IED00_RS24780 () | 90583..90741 | + | 159 | WP_001312861.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| IED00_RS24785 () | 91432..91638 | + | 207 | WP_000547971.1 | hypothetical protein | - |
| IED00_RS24790 () | 91663..91950 | + | 288 | WP_000107535.1 | hypothetical protein | - |
| IED00_RS24795 () | 92070..92891 | + | 822 | WP_001234469.1 | DUF945 domain-containing protein | - |
| IED00_RS24800 () | 93186..93776 | - | 591 | WP_165850686.1 | hypothetical protein | VF |
| IED00_RS24805 () | 94109..94492 | + | 384 | WP_001151524.1 | relaxosome protein TraM | - |
| IED00_RS24810 () | 94679..95368 | + | 690 | WP_000283380.1 | conjugal transfer transcriptional regulator TraJ | - |
| IED00_RS24815 () | 95467..95862 | + | 396 | WP_001309237.1 | conjugal transfer relaxosome protein TraY | - |
| IED00_RS24820 () | 95895..96254 | + | 360 | WP_000994781.1 | type IV conjugative transfer system pilin TraA | - |
| IED00_RS24825 () | 96269..96580 | + | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| IED00_RS24830 () | 96602..97168 | + | 567 | WP_000399792.1 | type IV conjugative transfer system protein TraE | - |
| IED00_RS24835 () | 97179..97883 | + | 705 | WP_072095570.1 | type-F conjugative transfer system secretin TraK | - |
| IED00_RS24840 () | 97883..99310 | + | 1428 | WP_000146685.1 | conjugal transfer protein TraB | - |
| IED00_RS24845 () | 99300..99872 | + | 573 | WP_000002794.1 | conjugal transfer protein TraP | - |
| IED00_RS24850 () | 99869..100186 | + | 318 | WP_001057292.1 | conjugal transfer protein TrbD | - |
| IED00_RS24855 () | 100183..100434 | + | 252 | WP_001038341.1 | conjugal transfer protein TrbG | - |
| IED00_RS24860 () | 100431..100946 | + | 516 | WP_000809906.1 | type IV conjugative transfer system lipoprotein TraV | - |
| IED00_RS24865 () | 101080..101301 | + | 222 | WP_001278689.1 | conjugal transfer protein TraR | - |
| IED00_RS24870 () | 101461..104088 | + | 2628 | WP_001064248.1 | type IV secretion system protein TraC | - |
| IED00_RS24875 () | 104085..104471 | + | 387 | WP_000214096.1 | type-F conjugative transfer system protein TrbI | - |
| IED00_RS24880 () | 104468..105100 | + | 633 | WP_001203745.1 | type-F conjugative transfer system protein TraW | - |
| IED00_RS24885 () | 105097..106089 | + | 993 | WP_000830839.1 | conjugal transfer pilus assembly protein TraU | - |
| IED00_RS24890 () | 106115..106576 | + | 462 | WP_000277845.1 | hypothetical protein | - |
| IED00_RS24895 () | 106606..107058 | + | 453 | WP_000069427.1 | hypothetical protein | - |
| IED00_RS24900 () | 107086..107724 | + | 639 | WP_001104248.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| IED00_RS24905 () | 107721..109529 | + | 1809 | WP_000821818.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| IED00_RS24910 () | 109556..109813 | + | 258 | WP_000864325.1 | conjugal transfer protein TrbE | - |
| IED00_RS24915 () | 109806..110549 | + | 744 | WP_001030376.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| IED00_RS24920 () | 110565..110912 | + | 348 | WP_001287895.1 | conjugal transfer protein TrbA | - |
| IED00_RS24925 () | 111031..111315 | + | 285 | WP_000624110.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| IED00_RS24930 () | 111302..111847 | + | 546 | WP_000052618.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| IED00_RS24935 () | 111777..112139 | + | 363 | WP_001443292.1 | P-type conjugative transfer protein TrbJ | - |
| IED00_RS24940 () | 112139..113512 | + | 1374 | WP_001137358.1 | conjugal transfer protein TraH | - |
| IED00_RS24945 () | 113509..116334 | + | 2826 | WP_001554363.1 | conjugal transfer mating pair stabilization protein TraG | - |
| IED00_RS24950 () | 116331..116840 | + | 510 | WP_000628099.1 | conjugal transfer entry exclusion protein TraS | - |
| IED00_RS24955 () | 116854..117585 | + | 732 | WP_000850424.1 | complement resistance protein TraT | - |
| IED00_RS24960 () | 117837..120035 | + | 2199 | WP_048974178.1 | type IV conjugative transfer system coupling protein TraD | - |
| IED00_RS24965 () | 120035..125305 | + | 5271 | WP_044864167.1 | Multifunctional conjugation protein TraI | Relaxase |
| IED00_RS24970 () | 125325..126071 | + | 747 | WP_001554367.1 | conjugal transfer pilus acetylase TraX | - |
| IED00_RS24975 () | 126125..126685 | + | 561 | WP_001554368.1 | fertility inhibition protein FinO | - |
| IED00_RS24980 () | 126818..127030 | + | 213 | WP_005012601.1 | hypothetical protein | - |
| IED00_RS24985 () | 127275..127736 | + | 462 | WP_001233848.1 | thermonuclease family protein | - |
| IED00_RS24990 () | 127782..127991 | + | 210 | WP_001299729.1 | hemolysin expression modulator Hha | - |
| IED00_RS24995 () | 128030..128620 | + | 591 | WP_000766816.1 | DUF2726 domain-containing protein | - |
| IED00_RS25000 () | 128860..129120 | + | 261 | WP_000083819.1 | replication regulatory protein RepA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|