MGE detailed information
MGE type: Conjugative plasmid MGE length: 92062 bp
Accession: NZ_CP060875 Location: 1..92062 Organism: Escherichia coli strain EC27 Replicon: plasmid pEC27-3
Accession: NZ_CP060875 Location: 1..92062 Organism: Escherichia coli strain EC27 Replicon: plasmid pEC27-3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H9210_RS23910 (46) | 46..1077 | + | 1032 | WP_000907852.1 | plasmid replication initiator RepA | - |
| H9210_RS23915 (1981) | 1981..2265 | + | 285 | WP_001178087.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| H9210_RS23920 (2265) | 2265..2540 | + | 276 | WP_000421259.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| H9210_RS23925 (2646) | 2646..2849 | + | 204 | Protein_3 | hypothetical protein | - |
| H9210_RS23930 (3119) | 3119..3385 | - | 267 | WP_000627832.1 | hypothetical protein | - |
| H9210_RS23935 (3426) | 3426..6392 | - | 2967 | WP_241424636.1 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| H9210_RS23940 (6396) | 6396..6956 | - | 561 | WP_001161490.1 | Tn3 family transposase TnpR_TnAs1 | Transposase |
| H9210_RS23945 (7266) | 7266..7802 | + | 537 | Protein_7 | PAS domain-containing protein | - |
| H9210_RS23950 (7870) | 7870..8967 | - | 1098 | Protein_8 | TonB-dependent receptor | - |
| H9210_RS23955 (9024) | 9024..9992 | - | 969 | WP_013362812.1 | IS5 family transposase IS903B | Transposase |
| H9210_RS23960 (10027) | 10027..10902 | - | 876 | WP_063859949.1 | Beta-lactamase Toho-1 | ARG |
| H9210_RS23965 (11152) | 11152..11475 | - | 324 | Protein_11 | transposase | - |
| H9210_RS23970 (11489) | 11489..11836 | + | 348 | WP_058914894.1 | Methyl-accepting chemotaxis protein McpU | VF |
| H9210_RS23975 (11984) | 11984..12517 | - | 534 | WP_124770269.1 | hypothetical protein | - |
| H9210_RS23980 (12573) | 12573..13175 | - | 603 | WP_000521606.1 | ProQ/FINO family protein | - |
| H9210_RS23985 (13351) | 13351..14403 | - | 1053 | WP_000655519.1 | hypothetical protein | - |
| H9210_RS23990 (14616) | 14616..15206 | - | 591 | WP_001401589.1 | hypothetical protein | - |
| H9210_RS23995 (15206) | 15206..15460 | - | 255 | WP_000343106.1 | hypothetical protein | - |
| H9210_RS24000 (16028) | 16028..16441 | + | 414 | WP_021513973.1 | hypothetical protein | - |
| H9210_RS24005 (16443) | 16443..17222 | + | 780 | WP_001164198.1 | site-specific integrase | - |
| H9210_RS24010 (17402) | 17402..18046 | + | 645 | WP_001144036.1 | ParA family protein | - |
| H9210_RS24015 (18133) | 18133..18441 | + | 309 | WP_000030199.1 | hypothetical protein | - |
| H9210_RS24020 (18855) | 18855..19835 | + | 981 | WP_000688514.1 | plasmid segregation protein ParM | - |
| H9210_RS24025 (19828) | 19828..20244 | + | 417 | WP_001278818.1 | plasmid partitioning/stability family protein | - |
| H9210_RS24030 (20246) | 20246..21520 | - | 1275 | WP_015058887.1 | translesion error-prone DNA polymerase V subunit UmuC | - |
| H9210_RS24035 (21520) | 21520..21957 | - | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| H9210_RS24040 (21954) | 21954..22202 | - | 249 | WP_106108372.1 | DinI-like family protein | - |
| H9210_RS24045 (22620) | 22620..23522 | + | 903 | WP_001442863.1 | DUF1281 domain-containing protein | - |
| H9210_RS24050 (23526) | 23526..23831 | + | 306 | WP_015058890.1 | hypothetical protein | - |
| H9210_RS24055 (23907) | 23907..24590 | + | 684 | WP_021513974.1 | DNA methylase | - |
| H9210_RS24060 (24591) | 24591..24812 | + | 222 | WP_001104885.1 | hypothetical protein | - |
| H9210_RS24065 (24793) | 24793..25259 | + | 467 | Protein_31 | DUF1380 family protein | - |
| H9210_RS24070 (25310) | 25310..26080 | + | 771 | WP_001434682.1 | hypothetical protein | - |
| H9210_RS24075 (26497) | 26497..26922 | + | 426 | WP_001198928.1 | antirestriction protein | - |
| H9210_RS24080 (26969) | 26969..27391 | + | 423 | WP_000271741.1 | DUF1380 family protein | - |
| H9210_RS24085 (27388) | 27388..27579 | + | 192 | WP_001027516.1 | hypothetical protein | - |
| H9210_RS24090 (27717) | 27717..27998 | + | 282 | WP_162713425.1 | hypothetical protein | - |
| H9210_RS24095 (28350) | 28350..28877 | + | 528 | WP_001276125.1 | single-stranded DNA-binding protein | - |
| H9210_RS24100 (28935) | 28935..29168 | + | 234 | WP_000006024.1 | DUF905 domain-containing protein | - |
| H9210_RS24105 (29227) | 29227..31185 | + | 1959 | WP_241424637.1 | ParB/RepB/Spo0J family partition protein | - |
| H9210_RS24110 (31240) | 31240..31674 | + | 435 | WP_000845898.1 | conjugation system SOS inhibitor PsiB | - |
| H9210_RS24115 (31671) | 31671..32390 | + | 720 | WP_001276261.1 | plasmid SOS inhibition protein A | - |
| H9210_RS24120 (32387) | 32387..32983 | + | 597 | WP_000978005.1 | hypothetical protein | - |
| H9210_RS24125 (33446) | 33446..33946 | + | 501 | WP_000117627.1 | antirestriction protein ArdA | - |
| H9210_RS24130 (34675) | 34675..35109 | + | 435 | WP_000218863.1 | hypothetical protein | - |
| H9210_RS24135 (35202) | 35202..35468 | + | 267 | WP_001247862.1 | hypothetical protein | - |
| H9210_RS24140 (35533) | 35533..36423 | + | 891 | WP_000038399.1 | Recombination-promoting nuclease RpnA | VF |
| H9210_RS24145 (36486) | 36486..36680 | + | 195 | WP_001496986.1 | hypothetical protein | - |
| H9210_RS24150 (36711) | 36711..36962 | - | 252 | WP_000148286.1 | helix-turn-helix transcriptional regulator | - |
| H9210_RS24155 (37543) | 37543..38391 | + | 849 | WP_167650131.1 | DUF4942 domain-containing protein | - |
| H9210_RS24160 (38477) | 38477..38812 | - | 336 | WP_000157095.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| H9210_RS24165 (39046) | 39046..39378 | + | 333 | WP_001283947.1 | IncI1-type relaxosome accessory protein NikA | - |
| H9210_RS24170 (39389) | 39389..42088 | + | 2700 | WP_241424638.1 | Protein TraI | Relaxase |
| H9210_RS24175 (42125) | 42125..44416 | - | 2292 | WP_241424639.1 | F-type conjugative transfer protein TrbC | - |
| H9210_RS24180 (44409) | 44409..45479 | - | 1071 | WP_000151583.1 | IncI1-type conjugal transfer protein TrbB | - |
| H9210_RS24185 (45498) | 45498..46706 | - | 1209 | WP_000121273.1 | IncI1-type conjugal transfer protein TrbA | - |
| - (46886) | 46886..46948 | - | 63 | NuclAT_0 | - | - |
| - (46886) | 46886..46948 | - | 63 | NuclAT_0 | - | - |
| - (46886) | 46886..46948 | - | 63 | NuclAT_0 | - | - |
| - (46886) | 46886..46948 | - | 63 | NuclAT_0 | - | - |
| H9210_RS24190 (46998) | 46998..47150 | + | 153 | WP_001387489.1 | Hok/Gef family protein | Toxin Detail |
| H9210_RS24195 (47222) | 47222..47473 | - | 252 | WP_001291964.1 | hypothetical protein | - |
| H9210_RS25130 (47972) | 47972..48067 | + | 96 | WP_001303310.1 | DinQ-like type I toxin DqlB | - |
| H9210_RS24205 (48132) | 48132..48308 | - | 177 | WP_001054900.1 | hypothetical protein | - |
| H9210_RS24210 (48640) | 48640..48849 | + | 210 | WP_000062602.1 | HEAT repeat domain-containing protein | - |
| H9210_RS24215 (48921) | 48921..49583 | - | 663 | WP_000644792.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| H9210_RS24220 (49648) | 49648..51816 | - | 2169 | WP_241424633.1 | DotA/TraY family protein | - |
| H9210_RS24225 (51913) | 51913..52497 | - | 585 | WP_001037996.1 | IncI1-type conjugal transfer protein TraX | - |
| H9210_RS24230 (52526) | 52526..53728 | - | 1203 | WP_001189156.1 | IncI1-type conjugal transfer protein TraW | - |
| H9210_RS24235 (53695) | 53695..54309 | - | 615 | WP_000337399.1 | IncI1-type conjugal transfer protein TraV | - |
| H9210_RS24240 (54309) | 54309..57353 | - | 3045 | WP_001024776.1 | IncI1-type conjugal transfer protein TraU | - |
| H9210_RS24245 (57443) | 57443..58243 | - | 801 | WP_001164792.1 | IncI1-type conjugal transfer protein TraT | - |
| H9210_RS24250 (58227) | 58227..58415 | - | 189 | WP_001277255.1 | putative conjugal transfer protein TraS | - |
| H9210_RS24255 (58479) | 58479..58883 | - | 405 | WP_241424634.1 | IncI1-type conjugal transfer protein TraR | - |
| H9210_RS24260 (58934) | 58934..59461 | - | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| H9210_RS24265 (59461) | 59461..60165 | - | 705 | WP_023155244.1 | IncI1-type conjugal transfer protein TraP | - |
| H9210_RS24270 (60165) | 60165..61454 | - | 1290 | WP_001271994.1 | conjugal transfer protein TraO | - |
| H9210_RS24275 (61457) | 61457..62440 | - | 984 | WP_021513963.1 | hypothetical protein | VF |
| H9210_RS24280 (62451) | 62451..63143 | - | 693 | WP_000138552.1 | DotI/IcmL family type IV secretion protein | - |
| H9210_RS24285 (63140) | 63140..63487 | - | 348 | WP_001055900.1 | conjugal transfer protein | - |
| H9210_RS24290 (63505) | 63505..67272 | - | 3768 | WP_006855639.1 | DUF5710 domain-containing protein | - |
| H9210_RS24295 (67362) | 67362..67913 | - | 552 | WP_000014584.1 | Phospholipase D | VF |
| H9210_RS24300 (67928) | 67928..68218 | - | 291 | WP_001299214.1 | hypothetical protein | - |
| H9210_RS24305 (68215) | 68215..69363 | - | 1149 | WP_001024976.1 | putative protein YggR | VF |
| H9210_RS24310 (69360) | 69360..70178 | - | 819 | WP_000646097.1 | hypothetical protein | VF |
| H9210_RS24315 (70175) | 70175..70633 | - | 459 | WP_001079808.1 | hypothetical protein | VF |
| H9210_RS24320 (71028) | 71028..71612 | - | 585 | WP_124770274.1 | histidine phosphatase family protein | - |
| H9210_RS24325 (71672) | 71672..72874 | - | 1203 | WP_000976357.1 | conjugal transfer protein TraF | - |
| H9210_RS24330 (72960) | 72960..73784 | - | 825 | WP_241424635.1 | conjugal transfer protein TraE | - |
| H9210_RS24335 (73935) | 73935..75089 | - | 1155 | WP_001139955.1 | site-specific integrase | - |
| H9210_RS24340 (76609) | 76609..76857 | + | 249 | WP_001349157.1 | hypothetical protein | - |
| H9210_RS24345 (76854) | 76854..78146 | - | 1293 | WP_039719938.1 | hypothetical protein | VF |
| H9210_RS24350 (78146) | 78146..78802 | - | 657 | WP_001193551.1 | hypothetical protein | VF |
| H9210_RS24355 (78787) | 78787..79347 | - | 561 | WP_000014005.1 | hypothetical protein | VF |
| H9210_RS24360 (79357) | 79357..79971 | - | 615 | WP_000908228.1 | hypothetical protein | VF |
| H9210_RS24365 (79988) | 79988..81073 | - | 1086 | WP_001208803.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| H9210_RS24370 (81086) | 81086..82639 | - | 1554 | WP_000362204.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| H9210_RS24375 (82650) | 82650..83102 | - | 453 | WP_001247333.1 | hypothetical protein | VF |
| H9210_RS24380 (83089) | 83089..84384 | - | 1296 | WP_000752776.1 | type 4b pilus protein PilO2 | - |
| H9210_RS24385 (84377) | 84377..86059 | - | 1683 | WP_000748143.1 | Outer membrane lipoprotein BfpB | VF |
| H9210_RS24390 (86073) | 86073..86510 | - | 438 | WP_000539811.1 | hypothetical protein | VF |
| H9210_RS24395 (86510) | 86510..87577 | - | 1068 | WP_021513968.1 | hypothetical protein | VF |
| H9210_RS24400 (88329) | 88329..88583 | - | 255 | WP_001136187.1 | PilI type IV pilus biogenesis protein | - |
| H9210_RS24405 (88755) | 88755..89438 | - | 684 | WP_000213863.1 | hypothetical protein | - |
| H9210_RS24410 (89692) | 89692..90225 | - | 534 | WP_001372168.1 | transcription termination/antitermination NusG family protein | - |
| H9210_RS24415 (90667) | 90667..90954 | - | 288 | WP_000074849.1 | conjugal transfer protein TraA | - |
| H9210_RS24420 (90872) | 90872..91102 | - | 231 | WP_228772074.1 | ash family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|